BLASTX nr result
ID: Cocculus23_contig00051937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00051937
(463 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256... 118 7e-25
emb|CBI27823.3| unnamed protein product [Vitis vinifera] 118 7e-25
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The... 115 6e-24
ref|XP_007038339.1| DNA binding protein, putative isoform 1 [The... 115 6e-24
gb|EYU25867.1| hypothetical protein MIMGU_mgv1a015300mg [Mimulus... 114 1e-23
ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4... 112 7e-23
gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Mor... 110 2e-22
ref|XP_004495578.1| PREDICTED: DNA-directed RNA polymerase III s... 107 2e-21
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu... 107 2e-21
ref|XP_004307797.1| PREDICTED: uncharacterized protein LOC101300... 106 3e-21
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600... 106 4e-21
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu... 105 5e-21
ref|XP_004239580.1| PREDICTED: DNA-directed RNA polymerase III s... 105 7e-21
ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prun... 104 1e-20
ref|XP_004287620.1| PREDICTED: uncharacterized protein LOC101290... 102 6e-20
ref|XP_006652221.1| PREDICTED: DNA-directed RNA polymerase III s... 102 7e-20
ref|XP_007220771.1| hypothetical protein PRUPE_ppa024519mg [Prun... 100 2e-19
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260... 100 2e-19
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera] 100 2e-19
emb|CAH66462.1| H0718E12.6 [Oryza sativa Indica Group] gi|116309... 100 2e-19
>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
Length = 289
Score = 118 bits (296), Expect = 7e-25
Identities = 56/79 (70%), Positives = 66/79 (83%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P GF GK+LVYKSG +KLKLGDTLYDVSPG DCVFAQD++A+NTE+K C ++GE
Sbjct: 210 LEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELK 269
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA VTPDVDS LS+M L
Sbjct: 270 KRAVVTPDVDSALSSMDDL 288
>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 118 bits (296), Expect = 7e-25
Identities = 56/79 (70%), Positives = 66/79 (83%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P GF GK+LVYKSG +KLKLGDTLYDVSPG DCVFAQD++A+NTE+K C ++GE
Sbjct: 215 LEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELK 274
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA VTPDVDS LS+M L
Sbjct: 275 KRAVVTPDVDSALSSMDDL 293
>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508775585|gb|EOY22841.1| DNA binding protein,
putative isoform 2 [Theobroma cacao]
Length = 328
Score = 115 bits (288), Expect = 6e-24
Identities = 52/76 (68%), Positives = 64/76 (84%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P GF GK+LVYKSG VKLKLG+TLYDVSPGSDC+FAQD+ AVNT EKHC ++GE
Sbjct: 249 LEELPGGFMGKMLVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGELG 308
Query: 281 VRATVTPDVDSLLSAM 234
R VTPD+ S+L+++
Sbjct: 309 KRVVVTPDISSVLNSV 324
>ref|XP_007038339.1| DNA binding protein, putative isoform 1 [Theobroma cacao]
gi|508775584|gb|EOY22840.1| DNA binding protein,
putative isoform 1 [Theobroma cacao]
Length = 359
Score = 115 bits (288), Expect = 6e-24
Identities = 52/76 (68%), Positives = 64/76 (84%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P GF GK+LVYKSG VKLKLG+TLYDVSPGSDC+FAQD+ AVNT EKHC ++GE
Sbjct: 280 LEELPGGFMGKMLVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGELG 339
Query: 281 VRATVTPDVDSLLSAM 234
R VTPD+ S+L+++
Sbjct: 340 KRVVVTPDISSVLNSV 355
>gb|EYU25867.1| hypothetical protein MIMGU_mgv1a015300mg [Mimulus guttatus]
Length = 162
Score = 114 bits (285), Expect = 1e-23
Identities = 56/79 (70%), Positives = 64/79 (81%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P GF GK+LVYKSG VKLKLGDTLYDVS G DCVFAQ+++AVN EEK C VGE
Sbjct: 84 LEELPAGFMGKMLVYKSGAVKLKLGDTLYDVSAGLDCVFAQEVVAVNAEEKKCCSVGELH 143
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA+VTPD+DS+L AM L
Sbjct: 144 KRASVTPDIDSVLKAMSDL 162
>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
polymerase III subunit RPC4, putative [Theobroma cacao]
Length = 294
Score = 112 bits (279), Expect = 7e-23
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P G GK+LV+KSG VKLKLGDTLYDV+PG +CVFAQD++AVNT EK C +VGE
Sbjct: 216 LEELPAGLMGKMLVHKSGAVKLKLGDTLYDVTPGLNCVFAQDVVAVNTAEKQCCVVGELD 275
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA +TPDVDS+L++M L
Sbjct: 276 KRAVLTPDVDSVLNSMADL 294
>gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Morus notabilis]
Length = 328
Score = 110 bits (275), Expect = 2e-22
Identities = 50/79 (63%), Positives = 62/79 (78%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L E+P GF GK+LVY+SG +KLK+GDTLYDVS G DCVF+QD++A+NT EKHC VGE
Sbjct: 250 LHELPAGFMGKMLVYRSGAIKLKIGDTLYDVSSGMDCVFSQDVVAINTVEKHCCAVGELK 309
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA +TPDVD +L +M L
Sbjct: 310 KRAAITPDVDFILQSMADL 328
>ref|XP_004495578.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Cicer
arietinum]
Length = 298
Score = 107 bits (267), Expect = 2e-21
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L E+PPG GK+LVYKSG VKLKLG+TLYDVS G DC FAQD A+NT EKHC I+GE +
Sbjct: 218 LNELPPGLMGKMLVYKSGAVKLKLGNTLYDVSSGMDCSFAQDYAAMNTAEKHCSIIGEIT 277
Query: 281 VRATVTPDVDSLLSAMGGLN 222
AT+TPDVD+ L + L+
Sbjct: 278 KHATITPDVDAALDCLKDLD 297
>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
gi|223550094|gb|EEF51581.1| DNA binding protein,
putative [Ricinus communis]
Length = 328
Score = 107 bits (266), Expect = 2e-21
Identities = 50/80 (62%), Positives = 63/80 (78%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L+ + G+ GK+LVY+SG VKLKLGDTLYDVS GSDC+FAQD++A+NT KHC +GE
Sbjct: 249 LDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIGELE 308
Query: 281 VRATVTPDVDSLLSAMGGLN 222
RA VTPDVDSLL ++ L+
Sbjct: 309 KRAVVTPDVDSLLDSVVNLS 328
>ref|XP_004307797.1| PREDICTED: uncharacterized protein LOC101300483 [Fragaria vesca
subsp. vesca]
Length = 324
Score = 106 bits (265), Expect = 3e-21
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+ G+ GK+LVYKSG VK KLGD LYDVSPGSDCVFAQDI A+NT + C ++GE
Sbjct: 245 LEELSEGYMGKMLVYKSGAVKFKLGDALYDVSPGSDCVFAQDIAAINTAARKCCVLGELG 304
Query: 281 VRATVTPDVDSLLSA 237
R VTPDVDSLL A
Sbjct: 305 QRVVVTPDVDSLLDA 319
>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 [Solanum tuberosum]
Length = 283
Score = 106 bits (264), Expect = 4e-21
Identities = 49/76 (64%), Positives = 63/76 (82%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L E+P GF GK+LVYKSG VKLKLG+TL+++SPG DC FAQD++AVNTEEK+C +GE +
Sbjct: 208 LNELPAGFMGKMLVYKSGAVKLKLGETLFNLSPGMDCSFAQDVVAVNTEEKYCSNIGELT 267
Query: 281 VRATVTPDVDSLLSAM 234
R +TPDVDSLL ++
Sbjct: 268 KRIIITPDVDSLLDSI 283
>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
gi|223544779|gb|EEF46295.1| DNA binding protein,
putative [Ricinus communis]
Length = 286
Score = 105 bits (263), Expect = 5e-21
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L+E+P G GK+LVY+SG VKLKLGDTLYDVSPG D FAQDI A+NT EKHC +V E
Sbjct: 208 LDELPAGHMGKMLVYRSGAVKLKLGDTLYDVSPGLDFAFAQDIAAINTAEKHCCVVAEID 267
Query: 281 VRATVTPDVDSLLSAMGGL 225
A VTPDVD+++++M L
Sbjct: 268 KHAIVTPDVDAIINSMADL 286
>ref|XP_004239580.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
[Solanum lycopersicum]
Length = 188
Score = 105 bits (262), Expect = 7e-21
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L E+P G GKLLVYKSG VKLKLG+TL++VSPG DC FAQD++AVNTEEK+C +GE +
Sbjct: 113 LNELPAGLMGKLLVYKSGAVKLKLGETLFNVSPGMDCSFAQDVVAVNTEEKYCSNIGELT 172
Query: 281 VRATVTPDVDSLLSA 237
R +TPDVDSLL +
Sbjct: 173 KRIIITPDVDSLLDS 187
>ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prunus persica]
gi|462400055|gb|EMJ05723.1| hypothetical protein
PRUPE_ppa017748mg [Prunus persica]
Length = 281
Score = 104 bits (260), Expect = 1e-20
Identities = 47/79 (59%), Positives = 64/79 (81%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L E+P GF GK+LVY+SG VK+K+GD+L+DVSPG +C FAQD++ VN EK C I+GE +
Sbjct: 203 LSELPAGFMGKMLVYRSGAVKMKIGDSLFDVSPGMNCDFAQDVVVVNKAEKGCGIIGELN 262
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA +TPDVDS+L+++ GL
Sbjct: 263 KRAIITPDVDSILASIDGL 281
>ref|XP_004287620.1| PREDICTED: uncharacterized protein LOC101290984 [Fragaria vesca
subsp. vesca]
Length = 286
Score = 102 bits (254), Expect = 6e-20
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L ++P GF GK+LVY+SG +K+KLGDTLYDVS G +C FAQD++A+NT EK C +GE +
Sbjct: 208 LGDLPAGFMGKMLVYRSGAIKMKLGDTLYDVSTGMNCDFAQDVVAINTTEKKCCTIGELN 267
Query: 281 VRATVTPDVDSLLSAMGGL 225
RA VTPD+DS+L+++ L
Sbjct: 268 KRAVVTPDIDSVLNSLEDL 286
>ref|XP_006652221.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Oryza
brachyantha]
Length = 313
Score = 102 bits (253), Expect = 7e-20
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L+E+P GF GK+LVYKSG VK+K+ D L+DVSPGSDC F+Q++ A+NT EKH +GE S
Sbjct: 233 LKELPGGFIGKILVYKSGKVKMKINDLLFDVSPGSDCKFSQEVAAINTREKHLCALGEIS 292
Query: 281 VRATVTPDVDSLLSAM 234
RA VTPDVD LL ++
Sbjct: 293 KRAVVTPDVDHLLDSL 308
>ref|XP_007220771.1| hypothetical protein PRUPE_ppa024519mg [Prunus persica]
gi|462417233|gb|EMJ21970.1| hypothetical protein
PRUPE_ppa024519mg [Prunus persica]
Length = 310
Score = 100 bits (250), Expect = 2e-19
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LEE+P G+ GK+LVYKSG +KLKLG+TL DVSPGSDC+ +D+ +NTEEK C ++G S
Sbjct: 232 LEELPGGYMGKMLVYKSGAIKLKLGNTLCDVSPGSDCLCDEDVAVINTEEKRCCVLGGIS 291
Query: 281 VRATVTPDVDSLLSAM 234
RA VTP+VDSLL+ +
Sbjct: 292 HRAVVTPNVDSLLNVI 307
>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
gi|297745083|emb|CBI38675.3| unnamed protein product
[Vitis vinifera]
Length = 348
Score = 100 bits (250), Expect = 2e-19
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LE++ G GK+LVYKSG +KLKLG+ LYDVSPG DC QD++A+NT +KHC+ +GE
Sbjct: 269 LEDLAGGHIGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKHCYALGELG 328
Query: 281 VRATVTPDVDSLLSAMGGLN 222
R VTPDVDSLL +M L+
Sbjct: 329 KRVIVTPDVDSLLDSMIALD 348
>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
Length = 348
Score = 100 bits (250), Expect = 2e-19
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
LE++ G GK+LVYKSG +KLKLG+ LYDVSPG DC QD++A+NT +KHC+ +GE
Sbjct: 269 LEDLAGGHXGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKHCYALGELG 328
Query: 281 VRATVTPDVDSLLSAMGGLN 222
R VTPDVDSLL +M L+
Sbjct: 329 KRVIVTPDVDSLLDSMIALD 348
>emb|CAH66462.1| H0718E12.6 [Oryza sativa Indica Group] gi|116309384|emb|CAH66463.1|
H0718E12.7 [Oryza sativa Indica Group]
Length = 308
Score = 100 bits (250), Expect = 2e-19
Identities = 43/75 (57%), Positives = 61/75 (81%)
Frame = -3
Query: 461 LEEVPPGFTGKLLVYKSGMVKLKLGDTLYDVSPGSDCVFAQDILAVNTEEKHCWIVGEPS 282
L+++P GF GK+LVY+SG VK+K+GD+L+DVSPGS+C+F Q++ A+N EKHC +GE S
Sbjct: 228 LKDLPEGFMGKILVYRSGKVKMKIGDSLFDVSPGSNCMFVQEVAAINAREKHCCTLGEIS 287
Query: 281 VRATVTPDVDSLLSA 237
RA VTPD++ LL +
Sbjct: 288 KRAIVTPDIEHLLDS 302