BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00051935
         (424 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding prote...    60   2e-07
emb|CBI21312.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]    60   2e-07
ref|XP_006844577.1| hypothetical protein AMTR_s00016p00199170 [A...    60   3e-07
ref|XP_006373199.1| hypothetical protein POPTR_0017s09580g [Popu...    57   2e-06

>ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding protein 5 [Vitis vinifera]
          Length = 484

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
 Frame = +2

Query: 17  NSSSVFRPKPNYYSPF---TTAKRKTPICEPTHQSKPITQINVRPYGPSMPATTAGNANS 187
           N+SSV+    + Y PF      K  T + +  HQ    T I   P+G   P+   G+A  
Sbjct: 337 NASSVYGAN-SIYRPFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGI 395

Query: 188 GVITTLPRILNSGLHTHNIAPAVHIRSVIPVCAAPP 295
            +  T+      G   H IAPAV IRSVIPVCAAPP
Sbjct: 396 HIPRTMG---TGGFQPHRIAPAVQIRSVIPVCAAPP 428


>emb|CBI21312.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
 Frame = +2

Query: 17  NSSSVFRPKPNYYSPF---TTAKRKTPICEPTHQSKPITQINVRPYGPSMPATTAGNANS 187
           N+SSV+    + Y PF      K  T + +  HQ    T I   P+G   P+   G+A  
Sbjct: 334 NASSVYGAN-SIYRPFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGI 392

Query: 188 GVITTLPRILNSGLHTHNIAPAVHIRSVIPVCAAPP 295
            +  T+      G   H IAPAV IRSVIPVCAAPP
Sbjct: 393 HIPRTMG---TGGFQPHRIAPAVQIRSVIPVCAAPP 425


>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
          Length = 552

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
 Frame = +2

Query: 17  NSSSVFRPKPNYYSPF---TTAKRKTPICEPTHQSKPITQINVRPYGPSMPATTAGNANS 187
           N+SSV+    + Y PF      K  T + +  HQ    T I   P+G   P+   G+A  
Sbjct: 405 NASSVYGAN-SIYRPFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGI 463

Query: 188 GVITTLPRILNSGLHTHNIAPAVHIRSVIPVCAAPP 295
            +  T+      G   H IAPAV IRSVIPVCAAPP
Sbjct: 464 HIPRTMG---TGGFQPHRIAPAVQIRSVIPVCAAPP 496


>ref|XP_006844577.1| hypothetical protein AMTR_s00016p00199170 [Amborella trichopoda]
           gi|548847048|gb|ERN06252.1| hypothetical protein
           AMTR_s00016p00199170 [Amborella trichopoda]
          Length = 533

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
 Frame = +2

Query: 5   IEKGNSSS----VFRPKPNYYSPFT---TAKRKTPICEPTHQSKPITQIN--VRPYGPSM 157
           I  GN+S+    VFRP+  Y  PF+   T     P   P H++ P    +   RP   S+
Sbjct: 391 INNGNNSNGPTPVFRPRSGYSRPFSLQNTVIFNAP--HPEHKNHPTQSGSKIFRPQAASL 448

Query: 158 PATTAGNANSGVITTLPRIL-----NSGLHTHNIAPAVHIRSVIPVCAAPPMK 301
           P         G     PRIL     N G+  H +APAV IRSV+PVCA+PP++
Sbjct: 449 PQLMVPVVRGGCNVN-PRILRADNFNGGIRAHAVAPAVQIRSVVPVCASPPLR 500


>ref|XP_006373199.1| hypothetical protein POPTR_0017s09580g [Populus trichocarpa]
           gi|550319905|gb|ERP50996.1| hypothetical protein
           POPTR_0017s09580g [Populus trichocarpa]
          Length = 487

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = +2

Query: 20  SSSVFRPKPNYYSPFTTAKRKTPICEPTHQSKPITQINVRPYGPSMPATTAGNA-NSGVI 196
           SSS++RP P  +S   T K  T + + T Q +  T I+ R +G   P+  A  + ++   
Sbjct: 344 SSSIYRPFP--FS--NTGKPVTSLLDNTSQHES-THISSRIFGSPNPSPMASTSIHTPSN 398

Query: 197 TTLPR-ILNSGLHTHNIAPAVHIRSVIPVCAAPP 295
           T +PR +   G + H IAPAV IRSVIPVCAAPP
Sbjct: 399 THIPRPMFTGGFNPHRIAPAVQIRSVIPVCAAPP 432