BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00051920
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007135098.1| hypothetical protein PHAVU_010G100600g [Phas...   114   2e-23
ref|XP_002511887.1| pentatricopeptide repeat-containing protein,...   111   1e-22
ref|XP_002320145.2| hypothetical protein POPTR_0014s08300g [Popu...   110   2e-22
ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containi...   106   3e-21
ref|XP_004510764.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_006491151.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_006444995.1| hypothetical protein CICLE_v10023685mg [Citr...   100   2e-19
ref|XP_003622500.1| Pentatricopeptide repeat-containing protein ...    96   4e-18
gb|EXC35099.1| hypothetical protein L484_021461 [Morus notabilis]      95   9e-18
ref|XP_007051754.1| Pentatricopeptide repeat superfamily protein...    92   6e-17
ref|XP_006295485.1| hypothetical protein CARUB_v10024588mg [Caps...    89   5e-16
ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Popu...    89   6e-16
ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16
ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group] g...    88   1e-15
ref|XP_002880214.1| pentatricopeptide repeat-containing protein ...    88   1e-15
ref|XP_006397789.1| hypothetical protein EUTSA_v10001720mg [Eutr...    87   2e-15
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]    87   2e-15
ref|XP_004296167.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15

>ref|XP_007135098.1| hypothetical protein PHAVU_010G100600g [Phaseolus vulgaris]
           gi|561008143|gb|ESW07092.1| hypothetical protein
           PHAVU_010G100600g [Phaseolus vulgaris]
          Length = 643

 Score =  114 bits (284), Expect = 2e-23
 Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLL--FKGMLVNMVEPDYITF 178
           KDA ++ +E+P RNVVSWNI+I G +GCG  +    N+ L    FK ML+ MV PD  T 
Sbjct: 101 KDAQKLFEELPVRNVVSWNILIRGFLGCGSAIENESNLQLCFSYFKRMLLEMVVPDGTTL 160

Query: 179 IGLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            GL+G C + +D+++G QLHCF +KL+L  +  VG+ LVDLY KCG
Sbjct: 161 NGLIGVCAKFHDIDVGFQLHCFAVKLRLDLDCFVGSVLVDLYAKCG 206


>ref|XP_002511887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549067|gb|EEF50556.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/104 (50%), Positives = 70/104 (67%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIG 184
           KDA+++ DEM  RNVV+WN +I G+V CG + + C       FK ML++ V  D IT   
Sbjct: 66  KDAHKLFDEMTVRNVVTWNTVICGLVNCGNNYKPCLYTGFSYFKKMLLDEVGFDPITLNV 125

Query: 185 LLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L  AC+ELN +EIG+QLHC ++KL    N +V ++LVDLYGKCG
Sbjct: 126 LFRACLELNGIEIGRQLHCLVVKLGFQLNCLVNSALVDLYGKCG 169



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/105 (30%), Positives = 56/105 (53%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           ++DA +  D M  +NVVSWN ++    G  GD ++    A+ L K ML+    PD +T  
Sbjct: 272 IEDARKAFDCMTAKNVVSWNTMVVAY-GRQGDGKE----AMKLLKEMLLEDFAPDELTLA 326

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            +L +C  ++      Q+H +++K  L     +G ++++ Y KCG
Sbjct: 327 SILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGNAMINAYSKCG 371


>ref|XP_002320145.2| hypothetical protein POPTR_0014s08300g [Populus trichocarpa]
           gi|550323769|gb|EEE98460.2| hypothetical protein
           POPTR_0014s08300g [Populus trichocarpa]
          Length = 595

 Score =  110 bits (276), Expect = 2e-22
 Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = +2

Query: 11  AYRVLDEMPKRNVVSWNIIISGMVGC-GGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           A+R+ DEM  RNVV+WN +I G+V C G D      +    F+ ML++ V  D IT  GL
Sbjct: 89  AHRLFDEMHVRNVVTWNTVICGLVDCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGL 148

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L AC+ELNDVEIG++LHCFI+KL  + N  V ++LVDLYGKCG
Sbjct: 149 LRACLELNDVEIGRELHCFIVKLGFAVNSFVNSALVDLYGKCG 191


>ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Cucumis sativus]
          Length = 616

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMV--GCGGDLRQCENVALLLFKGMLVNMVEPDYIT 175
           L  A  + DEM +RNVVSWN +I G+V  G GG+ +  ++   L FK ML+ +V+PD IT
Sbjct: 67  LDSARTLFDEMARRNVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLVDPDGIT 126

Query: 176 FIGLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           F GL  +CV LNDVE G+QLH F++K+    +  VG+++VD Y KCG
Sbjct: 127 FNGLFRSCVVLNDVESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCG 173



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/105 (37%), Positives = 51/105 (48%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           L DA +V DEMP RN VSW  +I   VG G    +    A+ LF+ ML     PD +TF 
Sbjct: 276 LYDARKVFDEMPTRNSVSWTTMI---VGYGQ--HEYGKEAVKLFRRMLRKDYCPDELTFA 330

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            LL +C   +      Q+H  +IKL       +   L+  Y KCG
Sbjct: 331 SLLSSCGFTSGASELMQVHSCLIKLGFEAFLSINNGLIYAYSKCG 375


>ref|XP_004510764.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Cicer arietinum]
          Length = 650

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLR-QCENVALLLFKGMLVNMVEPDYITFI 181
           KDA ++ DE+  RNVVSWNI+I G+V C  +    C  +    F+ ML+ MV PDYITF 
Sbjct: 109 KDAQKLFDELSVRNVVSWNIMIRGIVRCDNENELDCLQLCFSYFRRMLMEMVVPDYITFN 168

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           GL+  C + +D+E+G  LHCF +K+    +  VG +LVDLY KCG
Sbjct: 169 GLICLCAQFHDIEMGVMLHCFTVKVGFDLDCFVGCALVDLYAKCG 213



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCG--GDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           DA RV DEM  RNVV+WN +I   VGCG  GD     N  + L K ML     PD +T  
Sbjct: 318 DACRVFDEMSIRNVVAWNTMI---VGCGNHGD----GNEVMKLLKEMLREGFLPDELTIS 370

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            ++ +C   + +    Q H F +KL       V  SL+  Y KCG
Sbjct: 371 SVISSCGYASAITETLQAHAFAVKLSCQDFLSVPNSLISAYSKCG 415


>ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Glycine max]
          Length = 644

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENV--ALLLFKGMLVNMVEPDYITFI 181
           DA ++ +E+  RNVVSWNI+I G+VGCG       N       FK ML+ +V PD  TF 
Sbjct: 103 DAEKLFEELSVRNVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFN 162

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           GL G CV+ +D+++G QLHCF +KL L  +  VG+ LVDLY +CG
Sbjct: 163 GLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCG 207



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/103 (34%), Positives = 49/103 (47%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           DA+R+ D M  RNVV+WN II   VG G   R+  N  + L + ML     PD +T    
Sbjct: 312 DAHRLFDNMVIRNVVAWNTII---VGYGN--RREGNEVMKLLREMLREGFSPDELTISST 366

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           +  C  ++ +    Q H F +K        V  SL+  Y KCG
Sbjct: 367 ISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCG 409


>ref|XP_006491151.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Citrus sinensis]
          Length = 665

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/103 (45%), Positives = 70/103 (67%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           D  ++ DEM  RN+V+WN +ISG++ CGG++          F+ ML++ V  D+ITF  L
Sbjct: 116 DMEKLFDEMRVRNIVTWNTLISGIINCGGNVTP-------YFRRMLLDNVRLDHITFNSL 168

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L ACV+ +D+E+G++LH FI+K+    N  V ++LVDLYGKCG
Sbjct: 169 LRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCG 211



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGM-VGCGGDLRQCENVALLLFKGMLVNMVEPDYITF 178
           ++DA RV DE+  R++V WN+++S   + C GD       A+ +F  M +  ++ DY TF
Sbjct: 213 VEDARRVFDEVLCRDLVLWNVMVSCYALNCLGD------GAIAVFNLMRLEGMKGDYFTF 266

Query: 179 IGLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
             L+ +C  L   ++G+Q+H  +IK     + +V TSLVD+Y K G
Sbjct: 267 SSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNG 312



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/105 (34%), Positives = 55/105 (52%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           + DA RV D M  +NVVSWN ++ G  G  GD R+    A+ L + ML     PD +T  
Sbjct: 314 IDDACRVFDGMTAKNVVSWNTMVVGF-GQNGDGRE----AVKLLRDMLQGSFCPDEVTLA 368

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            +L +C  L+     +Q+H + IK  +     +  +L++ Y KCG
Sbjct: 369 SILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCG 413


>ref|XP_006444995.1| hypothetical protein CICLE_v10023685mg [Citrus clementina]
           gi|557547257|gb|ESR58235.1| hypothetical protein
           CICLE_v10023685mg [Citrus clementina]
          Length = 1055

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/103 (45%), Positives = 70/103 (67%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           D  ++ DEM  RN+V+WN +ISG++ CGG++          F+ ML++ V  D+ITF  L
Sbjct: 116 DMEKLFDEMRVRNIVTWNTLISGIINCGGNVTP-------YFRRMLLDNVRLDHITFNSL 168

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L ACV+ +D+E+G++LH FI+K+    N  V ++LVDLYGKCG
Sbjct: 169 LRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCG 211



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGM-VGCGGDLRQCENVALLLFKGMLVNMVEPDYITF 178
           ++DA RV DE+  R++V WN+++S   + C GD       A+ +F  M +  ++ DY TF
Sbjct: 213 VEDARRVFDEVLCRDLVLWNVMVSCYALNCLGD------GAIAVFNLMRLEGMKGDYFTF 266

Query: 179 IGLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSL 292
             L+ +C  L   ++G+Q+H  +IK     + +V TSL
Sbjct: 267 SSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSL 304


>ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497515|gb|AES78718.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 655

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLL--FKGMLVNMVEPDYITF 178
           +DA ++ +E+P RNVVSWNI+I   VG   D  +   + L    F+ ML+ M+ PD+ITF
Sbjct: 112 EDAKKLFEELPVRNVVSWNIMIRASVG-RNDENESSGMRLCFSYFRRMLLEMMVPDHITF 170

Query: 179 IGLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            GL+  C + ND+E+G QLHCF +K+    +  VG +LV LY KCG
Sbjct: 171 NGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCG 216



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           DA RV DEM  RNVV+WN +I G  G  GD     N  + L K ML     PD +T   +
Sbjct: 323 DARRVFDEMSIRNVVAWNTMIVGF-GNHGD----GNEVMKLVKEMLREGFLPDELTISSI 377

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           + +C   + +    Q+H F +KL       V  SL+  Y KCG
Sbjct: 378 ISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCG 420


>gb|EXC35099.1| hypothetical protein L484_021461 [Morus notabilis]
          Length = 683

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 48/105 (45%), Positives = 64/105 (60%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           L D ++VL EM  RNVV+WN +I G+V      +   ++    FK ML   V PD IT  
Sbjct: 124 LSDGHKVLGEMTVRNVVAWNAVICGVVDDRSYFKSSFSLGFSYFKRMLRETVHPDEITLN 183

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            LL AC+ LNDVE+  QLHCF++KL  + N  V  ++V+LY KCG
Sbjct: 184 VLLRACIALNDVEVALQLHCFVLKLGFASNCFVSAAVVELYEKCG 228


>ref|XP_007051754.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508704015|gb|EOX95911.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 673

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 50/103 (48%), Positives = 66/103 (64%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           DA ++ DEM  RN+V+WN +I     C   L    N+    FK ML+N V  D+IT  GL
Sbjct: 129 DAEKLFDEMRVRNLVTWNTMI-----CKCSL----NLGFSYFKKMLINNVGFDHITLSGL 179

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L A +ELND+  G+ LHCFI+K  + F+  VG++LVDLYGKCG
Sbjct: 180 LRASIELNDIVFGRGLHCFIVKSGILFDCFVGSALVDLYGKCG 222


>ref|XP_006295485.1| hypothetical protein CARUB_v10024588mg [Capsella rubella]
           gi|482564193|gb|EOA28383.1| hypothetical protein
           CARUB_v10024588mg [Capsella rubella]
          Length = 583

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/104 (41%), Positives = 65/104 (62%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIG 184
           +DA ++ DEMP RN+V+WNI+I G++   GD     ++       +L++ V  D+++FIG
Sbjct: 81  EDADKLFDEMPVRNIVTWNILIHGVLHRDGDTNHRAHLGFCYLSRILLSEVILDHVSFIG 140

Query: 185 LLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L+  C + NDV  G QLHC I+K  L  +  + T+LVD YGK G
Sbjct: 141 LIRLCTDSNDVGAGIQLHCLIVKQGLESSCFLSTTLVDFYGKFG 184


>ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Populus trichocarpa]
           gi|550321785|gb|EEF05570.2| hypothetical protein
           POPTR_0015s02060g [Populus trichocarpa]
          Length = 931

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 41/103 (39%), Positives = 66/103 (64%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           DA +V D MP  NV+SW  II+G V  GG    C+  A+ LF  M+   V+P++ TF  +
Sbjct: 409 DARKVFDRMPVHNVMSWTAIITGYVQSGG----CDREAIELFLEMVQGQVKPNHFTFSSV 464

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           L AC  L+D+ +G+Q++  ++K++L+  + VG SL+ +Y +CG
Sbjct: 465 LKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCG 507



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 40/104 (38%), Positives = 60/104 (57%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           L+ AY+V D MP RNVV+W ++I+     G         A+ LF  M+++   PD  T  
Sbjct: 303 LESAYKVFDRMPDRNVVTWTLMITRFQQLG-----FSRDAVDLFLDMVLSGYVPDRFTLS 357

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKC 313
           G++ AC E+  + +G+Q HC ++K  L  +  VG SLVD+Y KC
Sbjct: 358 GVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC 401


>ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Brachypodium distachyon]
          Length = 652

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/105 (43%), Positives = 67/105 (63%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           + DA +V DEMP+R+V  WN +++G V C     +    AL LF  M   MVEPD IT +
Sbjct: 304 MDDARKVFDEMPERDVFPWNALMTGYVQC-----KRGKEALRLFHDMQEAMVEPDDITMV 358

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            LL AC +L  +E+G  +H +I + ++S + M+GT+LVD+Y KCG
Sbjct: 359 NLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCG 403



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           ++ A RV  E+P++N ++W  +ISG+   G       +VA+  F+ M+   ++PD ITFI
Sbjct: 405 IEKAIRVFKEIPEKNALTWTAMISGLANHGH-----ADVAIKYFQRMIELGLQPDEITFI 459

Query: 182 GLLGACVELNDVEIGKQLHCFII-KLKLSFNHMVGTSLVDLYGKCG 316
           G+L AC     V+ G++    ++ K  L       + +VDL G+ G
Sbjct: 460 GVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAG 505


>ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
           gi|13940614|gb|AAK50416.1|AC021891_17 Putative
           selenium-binding protein-like [Oryza sativa Japonica
           Group] gi|31431939|gb|AAP53645.1| pentatricopeptide,
           putative [Oryza sativa Japonica Group]
           gi|125574711|gb|EAZ15995.1| hypothetical protein
           OsJ_31439 [Oryza sativa Japonica Group]
           gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa
           Japonica Group]
          Length = 651

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/105 (44%), Positives = 67/105 (63%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           + DA +V DEMP+R+V  WN +++G V C    +QC+  AL LF  M    V PD IT +
Sbjct: 310 MDDARKVFDEMPERDVFPWNALMTGYVQC----KQCKE-ALSLFHEMQEASVVPDEITMV 364

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            LL AC +L  +E+G  +H +I K +L F+  +GTSL+D+Y KCG
Sbjct: 365 NLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCG 409



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVN--MVEPDYIT 175
           ++DA R+ D  P R++VSWN +I G V  G         AL LF  M+    +V PD +T
Sbjct: 176 MEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAE-----ALELFWRMVAEDAVVRPDEVT 230

Query: 176 FIGLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            I  +  C ++ D+E+G++LH F+    +S    +  +L+D+Y KCG
Sbjct: 231 MIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCG 277


>ref|XP_002880214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326053|gb|EFH56473.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 585

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/103 (41%), Positives = 62/103 (60%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           DA ++ DEM  RN+V+WNI+I G++   GD     ++        L++ V  D+++FIGL
Sbjct: 89  DADKLFDEMLVRNIVTWNILIHGVIHRDGDTNHRAHLGFCYLSRSLLSEVILDHVSFIGL 148

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           +  C +  +VE G QLH  I+K  L  N  + TSLVD YGKCG
Sbjct: 149 IRLCTDSTNVEAGNQLHSLIVKQGLESNCFLSTSLVDFYGKCG 191


>ref|XP_006397789.1| hypothetical protein EUTSA_v10001720mg [Eutrema salsugineum]
           gi|557098862|gb|ESQ39242.1| hypothetical protein
           EUTSA_v10001720mg [Eutrema salsugineum]
          Length = 578

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/103 (40%), Positives = 64/103 (62%)
 Frame = +2

Query: 8   DAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGL 187
           DA ++ DEMP RN+V+WNI+I G++   G+ +    +       +L++ V  D+++FIGL
Sbjct: 80  DADKLFDEMPIRNIVTWNILIHGVIHRDGETKHKACLGFCYLSRILLSGVSLDHVSFIGL 139

Query: 188 LGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           +  C +   VE G QLH  ++K  L  N ++ TSLVD YGKCG
Sbjct: 140 IRLCTDSIHVEAGVQLHSLLLKQGLDSNCILSTSLVDFYGKCG 182



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/105 (33%), Positives = 54/105 (51%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           ++DA    + M  RNVVSWN +I G  G  G+ R+    A+ L   ML   ++PD  TF 
Sbjct: 283 MRDALESFESMVVRNVVSWNAMIVGY-GQNGEGRE----AMRLLGQMLRGNLQPDEFTFA 337

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            +L +C + + ++  KQ+   + K   +    V  SLV+ Y K G
Sbjct: 338 SVLSSCAQFSAIQEIKQIQAIVTKCGSADFLSVANSLVNAYSKTG 382


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/102 (47%), Positives = 63/102 (61%)
 Frame = +2

Query: 11  AYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGLL 190
           A  V   MPK NVVSWN++ISG V  G  L      AL++F  M    V+PD ITF  +L
Sbjct: 362 AENVFQNMPKTNVVSWNVMISGYVKVGSYLE-----ALVIFTDMRKAGVKPDAITFTSVL 416

Query: 191 GACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            AC +L  +E GK++H FII+ KL  N +V  +L+D+Y KCG
Sbjct: 417 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCG 458



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIG 184
           +DA ++ DEMP+R+V SWN +IS    C     Q E  AL LF+ M V+  +PD +T   
Sbjct: 158 EDAIKLFDEMPERDVASWNNVIS----CYYQDGQPEK-ALELFEEMKVSGFKPDSVTLTT 212

Query: 185 LLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           ++ +C  L D+E GK++H  +++   + +  V ++LVD+YGKCG
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCG 256



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/105 (34%), Positives = 61/105 (58%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           L+ A  V +++ ++NVVSWN +I+G     GD + C    + LF+ M    + P   T  
Sbjct: 258 LEMAKEVFEQIQRKNVVSWNSMIAGY-SLKGDSKSC----IELFRRMDEEGIRPTLTTLS 312

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            +L AC    ++++GK +H +II+ ++  +  V +SL+DLY KCG
Sbjct: 313 SILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/102 (47%), Positives = 63/102 (61%)
 Frame = +2

Query: 11  AYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGLL 190
           A  V   MPK NVVSWN++ISG V  G  L      AL++F  M    V+PD ITF  +L
Sbjct: 554 AENVFQNMPKTNVVSWNVMISGYVKVGSYLE-----ALVIFTDMRKAGVKPDAITFTSVL 608

Query: 191 GACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            AC +L  +E GK++H FII+ KL  N +V  +L+D+Y KCG
Sbjct: 609 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCG 650



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = +2

Query: 5   KDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIG 184
           +DA ++ DEMP+R+V SWN +IS    C     Q E  AL LF+ M V+  +PD +T   
Sbjct: 350 EDAIKLFDEMPERDVASWNNVIS----CYYQDGQPEK-ALELFEEMKVSGFKPDSVTLTT 404

Query: 185 LLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
           ++ +C  L D+E GK++H  +++   + +  V ++LVD+YGKCG
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCG 448



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/105 (34%), Positives = 61/105 (58%)
 Frame = +2

Query: 2   LKDAYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFI 181
           L+ A  V +++ ++NVVSWN +I+G     GD + C    + LF+ M    + P   T  
Sbjct: 450 LEMAKEVFEQIQRKNVVSWNSMIAGY-SLKGDSKSC----IELFRRMDEEGIRPTLTTLS 504

Query: 182 GLLGACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            +L AC    ++++GK +H +II+ ++  +  V +SL+DLY KCG
Sbjct: 505 SILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCG 549


>ref|XP_004296167.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Fragaria vesca subsp. vesca]
          Length = 336

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/102 (41%), Positives = 64/102 (62%)
 Frame = +2

Query: 11  AYRVLDEMPKRNVVSWNIIISGMVGCGGDLRQCENVALLLFKGMLVNMVEPDYITFIGLL 190
           A +V +EMP R+VVSW+ +I+G V C   L      AL +F+ M +    P+ +T + LL
Sbjct: 40  ARKVFEEMPVRDVVSWSSLIAGYVACNYPLE-----ALRVFREMKLANENPNSVTLVSLL 94

Query: 191 GACVELNDVEIGKQLHCFIIKLKLSFNHMVGTSLVDLYGKCG 316
            AC  L+D+ IGK +HC+II   +  +  +GT+LV++Y KCG
Sbjct: 95  TACTRLHDISIGKSIHCYIIVHPIEIDVALGTALVEMYSKCG 136