BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00051884
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                           46   3e-06
gb|AFB73911.1| polyprotein [Citrus sinensis]                           46   8e-06

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 136  IACDNQGALHLAKNLIVHSGTKHIGLLYHFI 44
            + CD+Q ALH+A+N   HS TKHIG+ YHF+
Sbjct: 1234 VFCDSQSALHIARNPAFHSRTKHIGVQYHFV 1264



 Score = 30.4 bits (67), Expect(2) = 3e-06
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -2

Query: 299  FNLATTSIG*VS*L*MIVALCTIEAEYAVVT*SSKELI 186
            F LA  ++  VS L  +VAL T EAEY   T + KE I
Sbjct: 1179 FTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAI 1216


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 46.2 bits (108), Expect(2) = 8e-06
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 136  IACDNQGALHLAKNLIVHSGTKHIGLLYHFI 44
            + CD+Q ALH+A+N   HS TKHIG+ YHF+
Sbjct: 1234 VFCDSQSALHIARNPAFHSRTKHIGVQYHFV 1264



 Score = 28.9 bits (63), Expect(2) = 8e-06
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 299  FNLATTSIG*VS*L*MIVALCTIEAEYAVVT*SSKELI 186
            F LA  ++  VS L  +VAL T EAEY   T + K+ I
Sbjct: 1179 FTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAI 1216