BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00051848
         (402 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    43   8e-07

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 43.1 bits (100), Expect(2) = 8e-07
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = -1

Query: 141 HFQEDIRWCIL-ANNIVLIDEIKSRLDAKPDA*RETSESKGFKMNLTK 1
           H Q+DI WC+L A +IVLIDE +  ++AK +  RE  ESKG  ++ +K
Sbjct: 386 HIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCLSRSK 433



 Score = 35.4 bits (80), Expect(2) = 8e-07
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = -3

Query: 376 KDILMIFIDLEKVFDRKSGDMILVDFQEDNVLQTGTLT*KRICQII*KPQKTTVGKTSQF 197
           KD+ M+FIDLEK +DR S D+I    ++  V        K + +      +T  G+T  F
Sbjct: 300 KDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESF 359

Query: 196 PI 191
           PI
Sbjct: 360 PI 361