BLASTX nr result
ID: Cocculus23_contig00051752
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00051752
(397 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat... 157 2e-36
ref|XP_007145648.1| hypothetical protein PHAVU_007G256700g [Phas... 156 2e-36
ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 154 9e-36
ref|XP_007203274.1| hypothetical protein PRUPE_ppa025467mg [Prun... 154 1e-35
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 154 2e-35
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 154 2e-35
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 152 6e-35
ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat... 152 6e-35
ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat... 151 1e-34
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 150 1e-34
ref|XP_002322694.1| pentatricopeptide repeat-containing family p... 150 1e-34
dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japo... 150 2e-34
gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japo... 150 2e-34
ref|XP_007028899.1| Pentatricopeptide repeat superfamily protein... 150 2e-34
gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays] 150 2e-34
ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [S... 150 2e-34
ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat... 147 1e-33
ref|NP_187990.1| pentatricopeptide repeat-containing protein [Ar... 147 1e-33
gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii] 147 2e-33
ref|XP_002882843.1| pentatricopeptide repeat-containing protein ... 146 3e-33
>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like isoform X1 [Glycine max]
gi|571440626|ref|XP_006575216.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At3g13770,
mitochondrial-like isoform X2 [Glycine max]
Length = 634
Score = 157 bits (396), Expect = 2e-36
Identities = 71/94 (75%), Positives = 79/94 (84%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV DLSCV HDVD+EQKE++LLSHSEKLA+ GLI TP S PIRV+KNLRICVDCHNF
Sbjct: 541 AGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNF 600
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AK+ SKI RE+SLRD R+H I GG CSCGDYW
Sbjct: 601 AKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
>ref|XP_007145648.1| hypothetical protein PHAVU_007G256700g [Phaseolus vulgaris]
gi|561018838|gb|ESW17642.1| hypothetical protein
PHAVU_007G256700g [Phaseolus vulgaris]
Length = 633
Score = 156 bits (395), Expect = 2e-36
Identities = 70/94 (74%), Positives = 80/94 (85%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV DLSCV HDVD+EQKE++LLSHSEKLA+ GLI +P S PIRV+KNLRICVDCHNF
Sbjct: 540 AGYVPDLSCVLHDVDEEQKEKILLSHSEKLALCFGLIASPESVPIRVIKNLRICVDCHNF 599
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AK++SKI RE+SLRD R+H I GG CSCGDYW
Sbjct: 600 AKYISKIYGREVSLRDKNRFHRIVGGKCSCGDYW 633
>ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Cicer arietinum]
Length = 642
Score = 154 bits (390), Expect = 9e-36
Identities = 67/93 (72%), Positives = 78/93 (83%)
Frame = -3
Query: 392 GYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNFA 213
GYV DLSCV HDVD+EQKE++LL HSEKLA++ GLI TP PIRV+KNLRICVDCHNFA
Sbjct: 550 GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIATPEHSPIRVIKNLRICVDCHNFA 609
Query: 212 KFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
K++SK+ RE+SLRD R+H I GG CSCGDYW
Sbjct: 610 KYISKVYRREVSLRDKNRFHRIVGGKCSCGDYW 642
>ref|XP_007203274.1| hypothetical protein PRUPE_ppa025467mg [Prunus persica]
gi|462398805|gb|EMJ04473.1| hypothetical protein
PRUPE_ppa025467mg [Prunus persica]
Length = 575
Score = 154 bits (389), Expect = 1e-35
Identities = 68/94 (72%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV DL CV +DVD+EQKE++LL HSEK+A+A GLI TP P+RV+KNLRICVDCHNF
Sbjct: 482 AGYVPDLGCVLYDVDEEQKEKVLLGHSEKMALAFGLIATPEGVPVRVIKNLRICVDCHNF 541
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AK VSKI RE+SLRD R+HHI GG CSCGDYW
Sbjct: 542 AKLVSKIYGREVSLRDKNRFHHIVGGTCSCGDYW 575
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 154 bits (388), Expect = 2e-35
Identities = 66/94 (70%), Positives = 79/94 (84%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV +LSCV +DVDDEQKE++L HSEKLA+A GLI TP P+R++KNLRICVDCHNF
Sbjct: 960 AGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNF 1019
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKF+S++ RE+SLRD R+HHI GG CSCGDYW
Sbjct: 1020 AKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 154 bits (388), Expect = 2e-35
Identities = 66/94 (70%), Positives = 79/94 (84%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV +LSCV +DVDDEQKE++L HSEKLA+A GLI TP P+R++KNLRICVDCHNF
Sbjct: 493 AGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNF 552
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKF+S++ RE+SLRD R+HHI GG CSCGDYW
Sbjct: 553 AKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 152 bits (383), Expect = 6e-35
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V DLSCV HDVDDEQKER+LL HSEKLAI GL+ TPS IRV+KNLRICVDCHNF
Sbjct: 515 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSGLTIRVMKNLRICVDCHNF 574
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ REISLRD R+H IT G C+CGDYW
Sbjct: 575 AKFVSKVYGREISLRDKNRFHIITDGTCTCGDYW 608
>ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 637
Score = 152 bits (383), Expect = 6e-35
Identities = 65/94 (69%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGY ++ CV +DVDDEQKE++LL HSEK+A+A G+I TP P+RV+KNLRICVDCHNF
Sbjct: 544 AGYSPEMECVLYDVDDEQKEKILLGHSEKMALAFGIIATPEGAPVRVIKNLRICVDCHNF 603
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AK VSKI RE+SLRD R+HH+ GGICSCGDYW
Sbjct: 604 AKLVSKIYGREVSLRDKNRFHHMVGGICSCGDYW 637
>ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Citrus sinensis]
Length = 644
Score = 151 bits (381), Expect = 1e-34
Identities = 67/94 (71%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV D+SCV +DVD+EQKE++LL HSEKLA+ GLI TP PIRV+KNLRICVDCHNF
Sbjct: 551 AGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLIGTPEGAPIRVIKNLRICVDCHNF 610
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ R++SLRD R+HHI G CSCGDYW
Sbjct: 611 AKFVSKVYGRKVSLRDKNRFHHIVEGTCSCGDYW 644
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 150 bits (380), Expect = 1e-34
Identities = 66/93 (70%), Positives = 79/93 (84%)
Frame = -3
Query: 392 GYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNFA 213
GYV DLSCV HDVD+EQKE++LL HSEKLA++ GLI +P+S PIRV+KNLRICVDCHNFA
Sbjct: 748 GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFA 807
Query: 212 KFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
K++SK+ RE+SLRD R+H I GG CSC DYW
Sbjct: 808 KYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867324|gb|EEF04455.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 586
Score = 150 bits (380), Expect = 1e-34
Identities = 65/94 (69%), Positives = 79/94 (84%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
+GYV D SCV +DVD+EQKE++LL HSEKLA+A GLI T P+RV+KNLRICVDCHNF
Sbjct: 493 SGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNF 552
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ R++S+RD R+HH+ GGICSCGDYW
Sbjct: 553 AKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
>dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 150 bits (379), Expect = 2e-34
Identities = 70/94 (74%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V DLSCV HDVDDEQKER+LL HSEKLAI GL+ TP IRV+KNLRICVDCHNF
Sbjct: 522 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNF 581
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ EREISLRD R+H +T G C+CGDYW
Sbjct: 582 AKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
>gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 150 bits (379), Expect = 2e-34
Identities = 70/94 (74%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V DLSCV HDVDDEQKER+LL HSEKLAI GL+ TP IRV+KNLRICVDCHNF
Sbjct: 490 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNF 549
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ EREISLRD R+H +T G C+CGDYW
Sbjct: 550 AKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
>ref|XP_007028899.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508717504|gb|EOY09401.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 718
Score = 150 bits (378), Expect = 2e-34
Identities = 66/93 (70%), Positives = 78/93 (83%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV DLSCV HDVD+EQKE++LL HSEKLA+ GL+ T P+RV+KNLRICVDCHNF
Sbjct: 493 AGYVPDLSCVLHDVDEEQKEKILLGHSEKLALTFGLMATSDGVPLRVIKNLRICVDCHNF 552
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDY 117
+KFVSKI R++SLRD R+HHI GG+CSCGDY
Sbjct: 553 SKFVSKIYTRQVSLRDKNRFHHIHGGVCSCGDY 585
>gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 150 bits (378), Expect = 2e-34
Identities = 70/94 (74%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V DLSCV HDVDDEQKER+LL HSEKLAI GL+ TPS I+V+KNLRICVDCHNF
Sbjct: 517 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 576
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ REISLRD R+H IT G C+CGDYW
Sbjct: 577 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610
>ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein
SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 150 bits (378), Expect = 2e-34
Identities = 70/94 (74%), Positives = 78/94 (82%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V DLSCV HDVDDEQKER+LL HSEKLAI GL+ TPS I+V+KNLRICVDCHNF
Sbjct: 495 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 554
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ REISLRD R+H IT G C+CGDYW
Sbjct: 555 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
>ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Oryza brachyantha]
Length = 438
Score = 147 bits (371), Expect = 1e-33
Identities = 68/94 (72%), Positives = 77/94 (81%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V DLSCV HDVDDEQKER+LL HSEKLAI GL+ TPS IR++KNLRICVDCHNF
Sbjct: 345 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPSGLTIRIMKNLRICVDCHNF 404
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSK+ REISLRD R+H + G C+CGDYW
Sbjct: 405 AKFVSKVYGREISLRDKNRFHLLAHGNCTCGDYW 438
>ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332641888|gb|AEE75409.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 628
Score = 147 bits (371), Expect = 1e-33
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV DLSCV +DVD+EQKE++LL HSEKLA+ GLI T PIRV KNLRICVDCHNF
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AK SK+ ERE+SLRD R+H I GICSCGDYW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii]
Length = 548
Score = 147 bits (370), Expect = 2e-33
Identities = 68/94 (72%), Positives = 77/94 (81%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AG+V +LSCV HDVDDEQKER+LL HSEKLA+ GL+ TP IRV+KNLRICVDCHNF
Sbjct: 455 AGFVPNLSCVLHDVDDEQKERMLLGHSEKLAVTFGLMNTPPGLTIRVMKNLRICVDCHNF 514
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AKFVSKI REISLRD R+H +T G C+CGDYW
Sbjct: 515 AKFVSKIYGREISLRDKNRFHLLTDGACTCGDYW 548
>ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328683|gb|EFH59102.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 627
Score = 146 bits (368), Expect = 3e-33
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = -3
Query: 395 AGYVHDLSCVFHDVDDEQKERLLLSHSEKLAIALGLIVTPSSHPIRVVKNLRICVDCHNF 216
AGYV D+SCV +DVD+EQKE++LL HSEKLA+ GLI T PIRV KNLRICVDCHNF
Sbjct: 534 AGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNF 593
Query: 215 AKFVSKICEREISLRDNKRYHHITGGICSCGDYW 114
AK SK+ ERE+SLRD R+H I GICSCGDYW
Sbjct: 594 AKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627