BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00051698
         (399 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006372280.1| hypothetical protein POPTR_0018s14930g [Popu...    69   9e-10
ref|XP_002525669.1| pentatricopeptide repeat-containing protein,...    61   1e-07
ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07

>ref|XP_006372280.1| hypothetical protein POPTR_0018s14930g [Populus trichocarpa]
           gi|550318811|gb|ERP50077.1| hypothetical protein
           POPTR_0018s14930g [Populus trichocarpa]
          Length = 618

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = +3

Query: 114 LFLWNLTIRDSARDVLLFPNL-LADAHLWASL*GQQFHIPLLLKACSKLGSMRDGTMIRA 290
           ++LWNL IRDS    L    L L    L   L G  F  PL+LKACS   S+RD T + +
Sbjct: 5   VYLWNLMIRDSTNSALFTRTLDLYSCMLRTGLHGNDFTFPLVLKACSNTNSLRDATKVHS 64

Query: 291 HTFLSSFHAHLFVVQTAI 344
           HTFL  F AH+F VQTA+
Sbjct: 65  HTFLLGFQAHVF-VQTAL 81


>ref|XP_002525669.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535105|gb|EEF36787.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 494

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +3

Query: 111 PLFLWNLTIRDSARDVLLFPNL-LADAHLWASL*GQQFHIPLLLKACSKLGSMRDGTMIR 287
           PL+LWNL IR S +  L F  L +  + L + + G  F  PLLLKACS   S+RDGT I 
Sbjct: 14  PLYLWNLMIRSSTKAGLFFQALDIYSSMLQSGVHGNGFTFPLLLKACSNTNSIRDGTKIH 73

Query: 288 AHTFLSSFHAHLFVVQTAI 344
           +H     F  H+FV+ T +
Sbjct: 74  SHLIQLGFQ-HVFVMTTLL 91


>ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
           gi|449514868|ref|XP_004164502.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 601

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +3

Query: 96  VVNRPPLFLWNLTIRDSARDVLLFPNLLADAHLWAS-L*GQQFHIPLLLKACSKLGSMRD 272
           ++ + PL+LWNLTIR S        +L   + +  S + G  F  PLLLKAC+ L S+ D
Sbjct: 12  LITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGD 71

Query: 273 GTMIRAHTFLSSFHAHLFVVQTAI 344
           GTM+ AH     F + +F VQT++
Sbjct: 72  GTMLHAHLIHVGFESDVF-VQTSL 94