BLASTX nr result
ID: Cocculus23_contig00051603
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00051603 (408 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007029760.1| Pentatricopeptide repeat-containing protein,... 104 1e-20 ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19 ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citr... 101 1e-19 ref|XP_004505033.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19 ref|XP_007159307.1| hypothetical protein PHAVU_002G227100g [Phas... 97 3e-18 ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Popu... 96 5e-18 gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis] 95 9e-18 ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17 ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17 ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ... 88 1e-15 ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ... 88 1e-15 ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15 ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14 ref|XP_002873691.1| pentatricopeptide repeat-containing protein ... 77 3e-12 gb|EYU42173.1| hypothetical protein MIMGU_mgv1a0181002mg, partia... 74 2e-11 ref|XP_006289420.1| hypothetical protein CARUB_v10002919mg [Caps... 74 2e-11 ref|XP_006399994.1| hypothetical protein EUTSA_v10012597mg [Eutr... 68 1e-09 sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-c... 68 2e-09 ref|NP_196981.1| pentatricopeptide repeat-containing protein [Ar... 68 2e-09 ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07 >ref|XP_007029760.1| Pentatricopeptide repeat-containing protein, putative isoform 3 [Theobroma cacao] gi|508718365|gb|EOY10262.1| Pentatricopeptide repeat-containing protein, putative isoform 3 [Theobroma cacao] Length = 1032 Score = 104 bits (259), Expect = 1e-20 Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 1/125 (0%) Frame = -3 Query: 373 FNSRQSSLIP-SCLTFFSNFSSNQRFPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLF 197 F S + L P L+ S FSS + S I + + IP SK+HLY LF Sbjct: 5 FTSHKKFLFPFRFLSRSSTFSSTKHPSPHKPSKIPPPFSPNTLSNPTIPSSKSHLYASLF 64 Query: 196 CTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVS 17 CTL +YL CGRF +A + F +MRKHG+IP L WN L++ FN GLVS+V ++YSEM++ Sbjct: 65 CTLIHLYLTCGRFSQAKDTFCNMRKHGVIPVLPLWNHLIYSFNASGLVSEVMLLYSEMIA 124 Query: 16 CWVKP 2 C V P Sbjct: 125 CGVLP 129 >ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Citrus sinensis] Length = 1039 Score = 101 bits (251), Expect = 1e-19 Identities = 43/78 (55%), Positives = 57/78 (73%) Frame = -3 Query: 235 IPHSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGL 56 I +K+HLY + FCTL Q+YL CGRF +AS+ F +MR +IP L WN+L++ FN GL Sbjct: 59 ISPAKSHLYAYFFCTLIQLYLTCGRFAKASDTFFTMRNFNIIPVLSLWNKLIYHFNASGL 118 Query: 55 VSQVWVVYSEMVSCWVKP 2 VSQVW+VY+ M+SC V P Sbjct: 119 VSQVWIVYTHMISCGVLP 136 >ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citrus clementina] gi|557539596|gb|ESR50640.1| hypothetical protein CICLE_v10030585mg [Citrus clementina] Length = 1039 Score = 101 bits (251), Expect = 1e-19 Identities = 43/78 (55%), Positives = 57/78 (73%) Frame = -3 Query: 235 IPHSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGL 56 I +K+HLY + FCTL Q+YL CGRF +AS+ F +MR +IP L WN+L++ FN GL Sbjct: 59 ISPAKSHLYAYFFCTLIQLYLTCGRFAKASDTFFTMRNFNIIPVLSLWNKLIYHFNASGL 118 Query: 55 VSQVWVVYSEMVSCWVKP 2 VSQVW+VY+ M+SC V P Sbjct: 119 VSQVWIVYTHMISCGVLP 136 >ref|XP_004505033.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Cicer arietinum] Length = 1011 Score = 99.8 bits (247), Expect = 4e-19 Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 3/105 (2%) Frame = -3 Query: 307 QRFPSKWVSSISESAHLSHQFHRK---IPHSKTHLYEFLFCTLTQIYLNCGRFIEASEAF 137 ++ SK + + S QFH+ IP +KTHLY F TL ++YL CGR AS+AF Sbjct: 6 KKVQSKTLLFLKPITTFSSQFHKDSILIPPTKTHLYASFFITLVRLYLKCGRVNTASDAF 65 Query: 136 LSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 L MR GL+P+L WN+LL++FN+ GLVSQV V+YS+MV C V P Sbjct: 66 LRMRNLGLVPTLPLWNKLLYEFNSSGLVSQVKVMYSDMVLCGVVP 110 >ref|XP_007159307.1| hypothetical protein PHAVU_002G227100g [Phaseolus vulgaris] gi|561032722|gb|ESW31301.1| hypothetical protein PHAVU_002G227100g [Phaseolus vulgaris] Length = 976 Score = 96.7 bits (239), Expect = 3e-18 Identities = 48/78 (61%), Positives = 55/78 (70%) Frame = -3 Query: 235 IPHSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGL 56 IP +KTHLY FCTL ++YL GRF AS AF MR L+PSL WN LL++FN CGL Sbjct: 50 IPPTKTHLYASFFCTLIRLYLASGRFCIASHAFSRMRALSLVPSLPLWNDLLYEFNACGL 109 Query: 55 VSQVWVVYSEMVSCWVKP 2 VSQV V+YSEMV C V P Sbjct: 110 VSQVRVLYSEMVFCGVGP 127 >ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Populus trichocarpa] gi|550316902|gb|EEE99833.2| hypothetical protein POPTR_0019s06000g [Populus trichocarpa] Length = 941 Score = 95.9 bits (237), Expect = 5e-18 Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 2/86 (2%) Frame = -3 Query: 253 HQFH-RKIPHSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSM-RKHGLIPSLHSWNQLL 80 H FH I +KTHLY FCTL +YL CGR +A++ F M R H ++P+L WN+L+ Sbjct: 36 HHFHTNSISPTKTHLYASFFCTLIHLYLTCGRLSKATDTFYDMIRTHHIVPTLPLWNRLI 95 Query: 79 HKFNTCGLVSQVWVVYSEMVSCWVKP 2 ++FN GLVSQVW +YSEM+SC V P Sbjct: 96 YQFNATGLVSQVWDLYSEMLSCGVLP 121 >gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis] Length = 1019 Score = 95.1 bits (235), Expect = 9e-18 Identities = 52/112 (46%), Positives = 68/112 (60%) Frame = -3 Query: 337 LTFFSNFSSNQRFPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNCGRF 158 L F S F + SI E+ ++S IP SK H+Y FCTL +YL GRF Sbjct: 13 LRFLSTFPPTKHHLYSSRPSIPETLNVSG-----IPPSKNHVYASFFCTLIHLYLAGGRF 67 Query: 157 IEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 +A++AF MR GL+P L WN+LL++FN GLVSQV ++YSEM+SC V P Sbjct: 68 SDATDAFSRMRNRGLVPVLPHWNRLLYEFNASGLVSQVRLLYSEMLSCGVVP 119 >ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like isoform X2 [Glycine max] Length = 867 Score = 92.4 bits (228), Expect = 6e-17 Identities = 51/111 (45%), Positives = 64/111 (57%) Frame = -3 Query: 334 TFFSNFSSNQRFPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNCGRFI 155 T F FS ++ F + I + H+ IP +KT LY FC L ++YL CGRF Sbjct: 26 TLFFVFSPSRTFHRPHYNPIRRFSSPIHKDSILIPPTKTLLYASFFCALIRLYLACGRFY 85 Query: 154 EASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 AS+ F MR L+PSL WN LL++FN G VSQV V+YSEMV C V P Sbjct: 86 IASDTFSRMRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVP 136 >ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like isoform X1 [Glycine max] Length = 1037 Score = 92.4 bits (228), Expect = 6e-17 Identities = 51/111 (45%), Positives = 64/111 (57%) Frame = -3 Query: 334 TFFSNFSSNQRFPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNCGRFI 155 T F FS ++ F + I + H+ IP +KT LY FC L ++YL CGRF Sbjct: 26 TLFFVFSPSRTFHRPHYNPIRRFSSPIHKDSILIPPTKTLLYASFFCALIRLYLACGRFY 85 Query: 154 EASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 AS+ F MR L+PSL WN LL++FN G VSQV V+YSEMV C V P Sbjct: 86 IASDTFSRMRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVP 136 >ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 989 Score = 88.2 bits (217), Expect = 1e-15 Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = -3 Query: 331 FFSNFSSNQRF--PSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNCGRF 158 FFS + +RF P+ + S H F IP +KTHLY FCTL ++YL RF Sbjct: 19 FFSPPTRLRRFFYPTPITRTFSSQIHKDSIF---IPPTKTHLYVSFFCTLIRLYLTHDRF 75 Query: 157 IEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 AS F MR GL+P+L WN LL++FN GLVSQV ++YS+M+ C V P Sbjct: 76 STASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVP 127 >ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 1023 Score = 88.2 bits (217), Expect = 1e-15 Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = -3 Query: 331 FFSNFSSNQRF--PSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNCGRF 158 FFS + +RF P+ + S H F IP +KTHLY FCTL ++YL RF Sbjct: 19 FFSPPTRLRRFFYPTPITRTFSSQIHKDSIF---IPPTKTHLYVSFFCTLIRLYLTHDRF 75 Query: 157 IEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 AS F MR GL+P+L WN LL++FN GLVSQV ++YS+M+ C V P Sbjct: 76 STASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVP 127 >ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Solanum lycopersicum] Length = 1035 Score = 85.1 bits (209), Expect = 9e-15 Identities = 37/74 (50%), Positives = 50/74 (67%) Frame = -3 Query: 229 HSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVS 50 H K LY FCTL ++L C R A+E F SMR + L+P + SWN+LLH FN+ GLV Sbjct: 49 HRKKSLYTSFFCTLIHLFLRCHRLSRATETFSSMRNYNLVPDIPSWNRLLHHFNSAGLVD 108 Query: 49 QVWVVYSEMVSCWV 8 QV ++YS+M++C V Sbjct: 109 QVIILYSDMLACGV 122 >ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like isoform X1 [Solanum tuberosum] Length = 1035 Score = 84.7 bits (208), Expect = 1e-14 Identities = 38/74 (51%), Positives = 50/74 (67%) Frame = -3 Query: 229 HSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVS 50 H K L+ FCTL ++L C R A+E F SMR + L+P L SWN+LLH FN+ GLV Sbjct: 49 HPKKSLHTSFFCTLVHLFLRCHRLSRATETFSSMRNYNLVPDLPSWNRLLHHFNSAGLVD 108 Query: 49 QVWVVYSEMVSCWV 8 QV V+YS+M++C V Sbjct: 109 QVIVLYSDMLACGV 122 >ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 938 Score = 77.0 bits (188), Expect = 3e-12 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 6/116 (5%) Frame = -3 Query: 331 FFSN---FSSNQR--FPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNC 167 F SN FSS +R P +S+S S + FH + +KT +Y LF TL ++YL+C Sbjct: 15 FLSNCRSFSSIKRPQIPVSEETSLSISKRI---FHPDLALNKTRVYVSLFHTLFRLYLSC 71 Query: 166 GRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLV-SQVWVVYSEMVSCWVKP 2 GR A+ +M G++P L WN L+H+FN GLV QV +VYS+M++C V P Sbjct: 72 GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSP 127 >gb|EYU42173.1| hypothetical protein MIMGU_mgv1a0181002mg, partial [Mimulus guttatus] Length = 199 Score = 73.9 bits (180), Expect = 2e-11 Identities = 42/125 (33%), Positives = 63/125 (50%) Frame = -3 Query: 394 LTELLLTFNSRQSSLIPSCLTFFSNFSSNQRFPSKWVSSISESAHLSHQFHRKIPHSKTH 215 +++ ++ N + + F S+ SS+Q V S++ + HQF Sbjct: 1 MSKTMINRNRHFIKHLAGTMRFSSSLSSSQ------VPSLTTTTRNPHQF---------- 44 Query: 214 LYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVV 35 Y LFCTL ++L C R A+ AF +MR P L +WN LLH FN+ GL+ QV V+ Sbjct: 45 -YTSLFCTLIHLFLRCRRLSSAAAAFSAMRDFKYTPELATWNSLLHHFNSAGLIHQVMVI 103 Query: 34 YSEMV 20 Y EM+ Sbjct: 104 YQEMI 108 >ref|XP_006289420.1| hypothetical protein CARUB_v10002919mg [Capsella rubella] gi|482558126|gb|EOA22318.1| hypothetical protein CARUB_v10002919mg [Capsella rubella] Length = 938 Score = 73.9 bits (180), Expect = 2e-11 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%) Frame = -3 Query: 325 SNFSSNQRFPSKWVSSISESAHL--SHQFHRKIPHSKTHLYEFLFCTLTQIYLNCGRFIE 152 SN+ S + E+ L +F +K +Y LFCTL Q+YL+CGR Sbjct: 17 SNYRSFSSIKRPQIPGSQETCFLITERRFRPASAPNKKRVYVSLFCTLFQLYLSCGRLYG 76 Query: 151 ASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLV-SQVWVVYSEMVSCWVKP 2 A+ +M G++P L WN ++H F+ GLV QV ++YS+M++C V P Sbjct: 77 AARTLSAMCNFGVVPDLRLWNSMIHHFSVNGLVHDQVSLIYSKMITCGVSP 127 >ref|XP_006399994.1| hypothetical protein EUTSA_v10012597mg [Eutrema salsugineum] gi|557101084|gb|ESQ41447.1| hypothetical protein EUTSA_v10012597mg [Eutrema salsugineum] Length = 938 Score = 68.2 bits (165), Expect = 1e-09 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Frame = -3 Query: 250 QFHRKIPHSKTHLYEFLFCTLTQIYLNCGRFIEASEAFLSMRKHGLIPSLHSWNQLLHKF 71 +F + +KT +Y LF TL ++Y++CGR A+ +M G++P L WN L+H F Sbjct: 44 RFDTDLAPNKTRVYVSLFHTLFRLYVSCGRLYGAARTLSAMCTFGVVPDLRLWNSLIHHF 103 Query: 70 NT-CGLVSQVWVVYSEMVSCWVKP 2 N C + QV ++YS+M++C V P Sbjct: 104 NVHCLVPHQVSLIYSKMIACGVAP 127 >sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14770, mitochondrial; Flags: Precursor Length = 940 Score = 67.8 bits (164), Expect = 2e-09 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%) Frame = -3 Query: 331 FFSN---FSSNQR--FPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNC 167 F SN FSS +R P +S+S + +F + KT +Y LF TL ++YL+C Sbjct: 17 FLSNCRSFSSIKRPQIPESEETSLSIT---QRRFDPDLAPIKTRVYVSLFHTLFRLYLSC 73 Query: 166 GRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLV-SQVWVVYSEMVSCWVKP 2 R A+ +M G++P WN L+H+FN GLV QV ++YS+M++C V P Sbjct: 74 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSP 129 >ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana] gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 938 Score = 67.8 bits (164), Expect = 2e-09 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%) Frame = -3 Query: 331 FFSN---FSSNQR--FPSKWVSSISESAHLSHQFHRKIPHSKTHLYEFLFCTLTQIYLNC 167 F SN FSS +R P +S+S + +F + KT +Y LF TL ++YL+C Sbjct: 15 FLSNCRSFSSIKRPQIPESEETSLSIT---QRRFDPDLAPIKTRVYVSLFHTLFRLYLSC 71 Query: 166 GRFIEASEAFLSMRKHGLIPSLHSWNQLLHKFNTCGLV-SQVWVVYSEMVSCWVKP 2 R A+ +M G++P WN L+H+FN GLV QV ++YS+M++C V P Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSP 127 >ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Fragaria vesca subsp. vesca] Length = 944 Score = 60.8 bits (146), Expect = 2e-07 Identities = 27/43 (62%), Positives = 32/43 (74%) Frame = -3 Query: 130 MRKHGLIPSLHSWNQLLHKFNTCGLVSQVWVVYSEMVSCWVKP 2 MR HGL+P L WN+LLH FN GL SQV ++YSEM+SC V P Sbjct: 1 MRSHGLVPGLPLWNRLLHHFNVSGLASQVSLLYSEMLSCGVVP 43