BLASTX nr result
ID: Cocculus23_contig00050989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00050989
(305 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABU54960.1| NADH dehydrogenase subunit F [Leptoterantha mayum... 68 5e-13
gb|AFJ52778.1| NADH dehydrogenase subunit F, partial (chloroplas... 67 8e-13
ref|YP_002720159.1| ndhF [Jatropha curcas] gi|224979610|gb|ACN72... 69 1e-12
gb|ADQ55962.1| NADH dehydrogenase subunit F, partial (chloroplas... 66 2e-12
gb|ABU54914.1| NADH dehydrogenase subunit F [Anamirta cocculus] 66 2e-12
gb|AFJ52767.1| NADH dehydrogenase subunit F, partial (chloroplas... 66 2e-12
gb|ABU54963.1| NADH dehydrogenase subunit F [Menispermum canaden... 66 2e-12
gb|ABU54961.1| NADH dehydrogenase subunit F [Limacia blumei] 66 2e-12
gb|ABU54925.1| NADH dehydrogenase subunit F [Calycocarpum lyonii] 66 2e-12
gb|ABU54969.1| NADH dehydrogenase subunit F [Odontocarya truncata] 68 2e-12
gb|ABU54966.1| NADH dehydrogenase subunit F [Odontocarya diplobo... 68 2e-12
gb|ABU54965.1| NADH dehydrogenase subunit F [Odontocarya amazonum] 68 2e-12
gb|ABU54967.1| NADH dehydrogenase subunit F [Odontocarya klugii] 68 2e-12
gb|ABU54949.1| NADH dehydrogenase subunit F [Elephantomene eburnea] 68 2e-12
gb|AFJ52758.1| NADH dehydrogenase subunit F, partial (chloroplas... 66 2e-12
gb|AFJ52751.1| NADH dehydrogenase subunit F, partial (chloroplas... 66 2e-12
gb|AFJ52750.1| NADH dehydrogenase subunit F, partial (chloroplas... 66 2e-12
gb|ABU54991.1| NADH dehydrogenase subunit F [Telitoxicum peruvia... 66 2e-12
gb|ABU54981.1| NADH dehydrogenase subunit F [Sarcopetalum harvey... 66 2e-12
gb|ABU54976.1| NADH dehydrogenase subunit F [Pericampylus glaucus] 66 2e-12
>gb|ABU54960.1| NADH dehydrogenase subunit F [Leptoterantha mayumbensis]
Length = 679
Score = 68.2 bits (165), Expect(2) = 5e-13
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 402 FACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRIYLL 443
Score = 31.6 bits (70), Expect(2) = 5e-13
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|AFJ52778.1| NADH dehydrogenase subunit F, partial (chloroplast) [Syntriandrium
preussii]
Length = 601
Score = 67.4 bits (163), Expect(2) = 8e-13
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EI+ DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 396 FACFWSKDEIINDSWLYSPIFAIIACFTAGLTAFYMFRIYLL 437
Score = 31.6 bits (70), Expect(2) = 8e-13
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 438 TFEGNLNVHFQNY 450
>ref|YP_002720159.1| ndhF [Jatropha curcas] gi|224979610|gb|ACN72737.1| ndhF [Jatropha
curcas]
Length = 788
Score = 68.6 bits (166), Expect(2) = 1e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 411 FACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRVYLL 452
Score = 29.6 bits (65), Expect(2) = 1e-12
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEG+ NVHFQNY
Sbjct: 453 TFEGHLNVHFQNY 465
>gb|ADQ55962.1| NADH dehydrogenase subunit F, partial (chloroplast) [Tinomiscium
petiolare]
Length = 693
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54914.1| NADH dehydrogenase subunit F [Anamirta cocculus]
Length = 691
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|AFJ52767.1| NADH dehydrogenase subunit F, partial (chloroplast) [Sinomenium
acutum]
Length = 680
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54963.1| NADH dehydrogenase subunit F [Menispermum canadense]
gi|156181534|gb|ABU54964.1| NADH dehydrogenase subunit F
[Menispermum dauricum]
Length = 680
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54961.1| NADH dehydrogenase subunit F [Limacia blumei]
Length = 680
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRVYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54925.1| NADH dehydrogenase subunit F [Calycocarpum lyonii]
Length = 680
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 406 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 446
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 447 TFEGNLNVHFQNY 459
>gb|ABU54969.1| NADH dehydrogenase subunit F [Odontocarya truncata]
Length = 679
Score = 68.2 bits (165), Expect(2) = 2e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 402 FACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRIYLL 443
Score = 29.6 bits (65), Expect(2) = 2e-12
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQ+Y
Sbjct: 444 TFEGNLNVHFQDY 456
>gb|ABU54966.1| NADH dehydrogenase subunit F [Odontocarya diplobotrya]
Length = 679
Score = 68.2 bits (165), Expect(2) = 2e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 402 FACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRIYLL 443
Score = 29.6 bits (65), Expect(2) = 2e-12
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQ+Y
Sbjct: 444 TFEGNLNVHFQDY 456
>gb|ABU54965.1| NADH dehydrogenase subunit F [Odontocarya amazonum]
Length = 679
Score = 68.2 bits (165), Expect(2) = 2e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 402 FACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRIYLL 443
Score = 29.6 bits (65), Expect(2) = 2e-12
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQ+Y
Sbjct: 444 TFEGNLNVHFQDY 456
>gb|ABU54967.1| NADH dehydrogenase subunit F [Odontocarya klugii]
Length = 678
Score = 68.2 bits (165), Expect(2) = 2e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 133 FALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
FA FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 402 FACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRIYLL 443
Score = 29.6 bits (65), Expect(2) = 2e-12
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQ+Y
Sbjct: 444 TFEGNLNVHFQDY 456
>gb|ABU54949.1| NADH dehydrogenase subunit F [Elephantomene eburnea]
Length = 678
Score = 68.2 bits (165), Expect(2) = 2e-12
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLLL 261
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL+
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRAYLLI 444
Score = 29.6 bits (65), Expect(2) = 2e-12
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 258 FEGNFNVHFQNY 293
FEGN NVHFQNY
Sbjct: 445 FEGNLNVHFQNY 456
>gb|AFJ52758.1| NADH dehydrogenase subunit F, partial (chloroplast) [Diploclisia
affinis]
Length = 678
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRVYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|AFJ52751.1| NADH dehydrogenase subunit F, partial (chloroplast) [Borismene
japurensis]
Length = 678
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|AFJ52750.1| NADH dehydrogenase subunit F, partial (chloroplast) [Aspidocarya
uvifera]
Length = 678
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRMYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54991.1| NADH dehydrogenase subunit F [Telitoxicum peruvianum]
Length = 678
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRVYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54981.1| NADH dehydrogenase subunit F [Sarcopetalum harveyanum]
Length = 678
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRVYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456
>gb|ABU54976.1| NADH dehydrogenase subunit F [Pericampylus glaucus]
Length = 678
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 136 ALFWSKGEILYDSWLHSPIFEIIACFTTGLTAFCMFQGHLL 258
A FWSK EIL DSWL+SPIF IIACFT GLTAF MF+ +LL
Sbjct: 403 ACFWSKDEILNDSWLYSPIFAIIACFTAGLTAFYMFRVYLL 443
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 TFEGNFNVHFQNY 293
TFEGN NVHFQNY
Sbjct: 444 TFEGNLNVHFQNY 456