BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00050942
         (260 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    88   8e-18
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    88   8e-18
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    88   4e-17
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]    93   4e-17
ref|XP_004305746.1| PREDICTED: uncharacterized protein LOC101308...    91   2e-16
emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]    80   5e-16
ref|XP_004301249.1| PREDICTED: genome polyprotein-like [Fragaria...    87   2e-15
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    86   5e-15
gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Ja...    84   2e-14
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    78   2e-14
ref|XP_004304989.1| PREDICTED: uncharacterized protein LOC101293...    84   2e-14
ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group] g...    84   3e-14
emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]            84   3e-14
ref|XP_006588112.1| PREDICTED: uncharacterized mitochondrial pro...    83   4e-14
ref|XP_006494928.1| PREDICTED: uncharacterized protein LOC102619...    79   4e-14
ref|XP_006589833.1| PREDICTED: uncharacterized protein LOC102662...    83   5e-14
ref|XP_006575963.1| PREDICTED: uncharacterized mitochondrial pro...    83   5e-14
gb|ABD78322.1| polyprotein [Primula vulgaris]                          83   5e-14
ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [S...    82   6e-14
ref|XP_006599906.1| PREDICTED: uncharacterized protein LOC102659...    82   6e-14

>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 88.2 bits (217), Expect(2) = 8e-18
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FG  E+EYLGHLIS +GV  DP+KI+++L  P P+S K + GFLGL  YYRKFI
Sbjct: 702 KKSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFI 761

Query: 25  RGFGTMAA 2
           +G+G +AA
Sbjct: 762 KGYGLIAA 769



 Score = 27.7 bits (60), Expect(2) = 8e-18
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFAKCQNVVLEC 178
           +HH  T+L IL  +QLFAK       C
Sbjct: 684 VHHLQTVLDILKQHQLFAKKSKCCFGC 710


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 88.2 bits (217), Expect(2) = 8e-18
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FG  E+EYLGHLIS +GV  DP+KI+++L  P P+S K + GFLGL  YYRKFI
Sbjct: 749 KKSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFI 808

Query: 25  RGFGTMAA 2
           +G+G +AA
Sbjct: 809 KGYGLIAA 816



 Score = 27.7 bits (60), Expect(2) = 8e-18
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFAKCQNVVLEC 178
           +HH  T+L IL  +QLFAK       C
Sbjct: 731 VHHLQTVLDILKQHQLFAKKSKCCFGC 757


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 88.2 bits (217), Expect(2) = 4e-17
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FG  E+EYLGHLIS +GV  DP+KI+++L  P P+S K + GFLGL  YYRKFI
Sbjct: 716 KKSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFI 775

Query: 25  RGFGTMAA 2
           +G+G +AA
Sbjct: 776 KGYGLIAA 783



 Score = 25.4 bits (54), Expect(2) = 4e-17
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFAKCQNVVLEC 178
           ++H  T+L IL  +QLFAK       C
Sbjct: 698 VYHLQTVLDILKQHQLFAKKSKCCFGC 724


>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
          Length = 790

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SK RFGVL+VEYLGH+IS  GV VDP+KIQ+V++ P  ++AKGV GFLGL  YYRKFI
Sbjct: 119 KESKFRFGVLQVEYLGHIISEQGVSVDPAKIQAVIEWPTLTTAKGVRGFLGLAGYYRKFI 178

Query: 25  RGFGTMAA 2
           R FG++AA
Sbjct: 179 RHFGSIAA 186


>ref|XP_004305746.1| PREDICTED: uncharacterized protein LOC101308702 [Fragaria vesca
           subsp. vesca]
          Length = 1163

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FGV +VEYLGH++S  GV VDP+KI S+ + PIP+S K + GFLGL  YYRK++
Sbjct: 719 KESKCTFGVNQVEYLGHIVSAEGVAVDPAKISSIQKWPIPTSLKALRGFLGLAGYYRKYV 778

Query: 25  RGFGTMA 5
           RGFG +A
Sbjct: 779 RGFGIIA 785


>emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]
          Length = 921

 Score = 80.5 bits (197), Expect(2) = 5e-16
 Identities = 41/68 (60%), Positives = 50/68 (73%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K +  RFGV +V+YLGH+IS +GVVVDP+KIQ VL+   PS+ KGV GFL L  YY KFI
Sbjct: 407 KATNYRFGVSQVDYLGHIISEHGVVVDPTKIQVVLEWXTPSTTKGVXGFLXLAGYYLKFI 466

Query: 25  RGFGTMAA 2
           R F  +AA
Sbjct: 467 RHFEGIAA 474



 Score = 29.3 bits (64), Expect(2) = 5e-16
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFAKCQN 193
           L H  TIL IL TN LFAK  N
Sbjct: 389 LSHLRTILKILKTNHLFAKATN 410


>ref|XP_004301249.1| PREDICTED: genome polyprotein-like [Fragaria vesca subsp. vesca]
          Length = 449

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/69 (57%), Positives = 51/69 (73%)
 Frame = -2

Query: 211 VCKMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRK 32
           V K SKC FG  +VEYLGH+IS  GV VDPSKI+ V + P+P + K + GFLGL  YYRK
Sbjct: 62  VVKESKCSFGASQVEYLGHIISGKGVAVDPSKIECVEKWPLPKTIKALRGFLGLAGYYRK 121

Query: 31  FIRGFGTMA 5
           +++GFG +A
Sbjct: 122 YVKGFGLIA 130


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/69 (60%), Positives = 48/69 (69%)
 Frame = -2

Query: 211 VCKMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRK 32
           V    KC FG   VEYLGHLIS  GV VDPSK+ SV + PIP + KGV GFLGL  YYRK
Sbjct: 565 VANKKKCYFGQETVEYLGHLISKEGVAVDPSKVVSVTRWPIPKNVKGVRGFLGLTDYYRK 624

Query: 31  FIRGFGTMA 5
           FI+ +G +A
Sbjct: 625 FIKDYGKIA 633


>gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
           gi|108706172|gb|ABF93967.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1461

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 39/68 (57%), Positives = 50/68 (73%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FGV  V YLGH+IS  GV +DP+K+Q++ + P P SA+ V GFLGL  YYRKF+
Sbjct: 702 KRSKCAFGVDSVAYLGHVISAAGVAMDPAKVQAIREWPQPRSARAVRGFLGLAGYYRKFV 761

Query: 25  RGFGTMAA 2
             +GT+AA
Sbjct: 762 HNYGTIAA 769


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 77.8 bits (190), Expect(2) = 2e-14
 Identities = 33/66 (50%), Positives = 49/66 (74%)
 Frame = -2

Query: 202  MSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFIR 23
            + KC FG  EV YLGH+IS  GV +DPSK+Q+++   IPS+ + + GFLGL  YYR+F++
Sbjct: 809  LKKCEFGKEEVAYLGHIISSKGVAMDPSKVQAMMDWSIPSTLRELRGFLGLTGYYRRFVK 868

Query: 22   GFGTMA 5
            G+ ++A
Sbjct: 869  GYASIA 874



 Score = 26.6 bits (57), Expect(2) = 2e-14
 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFA---KCQ 196
           +HH + +L +L+TN LFA   KC+
Sbjct: 790 MHHLNVVLGLLATNHLFANLKKCE 813


>ref|XP_004304989.1| PREDICTED: uncharacterized protein LOC101293703 [Fragaria vesca
            subsp. vesca]
          Length = 1996

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/67 (59%), Positives = 49/67 (73%)
 Frame = -2

Query: 205  KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
            K SKC FG   VEYLGH+IS  GV VDPSKI+ V   P+P++ K + GFLGL  YYRKF+
Sbjct: 1209 KASKCTFGSDTVEYLGHVISKEGVAVDPSKIECVKNWPLPATLKELRGFLGLAGYYRKFV 1268

Query: 25   RGFGTMA 5
            +GFG +A
Sbjct: 1269 KGFGIIA 1275


>ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
           gi|15217201|gb|AAK92545.1|AC051624_3 Putative
           retroelement [Oryza sativa Japonica Group]
           gi|31431040|gb|AAP52878.1| retrotransposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group] gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza
           sativa Japonica Group]
          Length = 1476

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FGV  + YLGH+I   GV +DP+K+Q+V+  P P SA+ V GFLGL  YYRKF+
Sbjct: 717 KRSKCAFGVSSISYLGHIIGATGVSMDPAKVQAVVDWPQPRSARTVRGFLGLAGYYRKFV 776

Query: 25  RGFGTMAA 2
             +GT+AA
Sbjct: 777 HDYGTIAA 784


>emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
          Length = 1448

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K +KC FG   V YLGH+IS  GV +DP+K+Q++L  P P S + V GFLGL  YYRKF+
Sbjct: 697 KRAKCAFGASSVSYLGHVISAAGVAMDPTKVQAILDWPAPRSVRAVRGFLGLAGYYRKFV 756

Query: 25  RGFGTMAA 2
             +GT+AA
Sbjct: 757 HNYGTVAA 764


>ref|XP_006588112.1| PREDICTED: uncharacterized mitochondrial protein AtMg00860-like
           [Glycine max]
          Length = 149

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = -2

Query: 196 KCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFIRGF 17
           KC FG   +EYLGH+IS  GV VDP+K++S+L  PIP++ KGV GFLG+  YY+KFI+ +
Sbjct: 52  KCNFGQRSIEYLGHVISKQGVEVDPNKVKSMLDWPIPTNVKGVRGFLGITSYYKKFIKDY 111

Query: 16  GTMA 5
           G +A
Sbjct: 112 GNIA 115


>ref|XP_006494928.1| PREDICTED: uncharacterized protein LOC102619588, partial [Citrus
           sinensis]
          Length = 418

 Score = 79.3 bits (194), Expect(2) = 4e-14
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K+SKC FG  ++EYLGH +S  GV VDP+KIQ+VL  P P +   V GFLGL  YYR+F+
Sbjct: 339 KLSKCSFGQAKLEYLGHFVSTQGVSVDPTKIQAVLNWPKPKTIAAVRGFLGLTGYYRRFV 398

Query: 25  RGFGTMAA 2
           +G+  + +
Sbjct: 399 KGYAQITS 406



 Score = 23.9 bits (50), Expect(2) = 4e-14
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFAK 202
           L+H   +L +L  NQL+AK
Sbjct: 321 LYHLKIVLQLLHQNQLYAK 339


>ref|XP_006589833.1| PREDICTED: uncharacterized protein LOC102662523 [Glycine max]
          Length = 721

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 37/67 (55%), Positives = 52/67 (77%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K+SKC FG+ +V+YLGH +S NGV +D SK+Q+VL  P P+S K + GFLGL  YYR+FI
Sbjct: 167 KLSKCSFGLTKVDYLGHTVSGNGVEMDQSKVQAVLDWPSPTSIKQLRGFLGLTGYYRRFI 226

Query: 25  RGFGTMA 5
           +G+ ++A
Sbjct: 227 QGYASIA 233


>ref|XP_006575963.1| PREDICTED: uncharacterized mitochondrial protein AtMg00860-like
           [Glycine max]
          Length = 116

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = -2

Query: 211 VCKMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRK 32
           + K SKC FGV +VEYLGH+IS  GV  DP+KI +V   P+ ++ K + GFLGL  YYR+
Sbjct: 7   LAKQSKCYFGVPQVEYLGHVISIEGVSTDPAKIVAVQNWPMSATLKQLIGFLGLAGYYRR 66

Query: 31  FIRGFGTMA 5
           F+R +GTMA
Sbjct: 67  FVRNYGTMA 75


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 37/67 (55%), Positives = 51/67 (76%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC+F   E++YLGHLIS  GV  DP+KI+++L+ P+P + KG+ GFLGL  YYR+FI
Sbjct: 673 KSSKCKFFQKEIDYLGHLISDQGVKADPNKIKAMLEWPVPKNLKGLRGFLGLTGYYRRFI 732

Query: 25  RGFGTMA 5
           R +G +A
Sbjct: 733 RNYGGIA 739


>ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
           gi|241943825|gb|EES16970.1| hypothetical protein
           SORBIDRAFT_08g010830 [Sorghum bicolor]
          Length = 1462

 Score = 82.0 bits (201), Expect(2) = 6e-14
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           K SKC FGV  + YLGH+IS  GV +D +K+Q+V   P P SA+ V GFLGL  YYRKF+
Sbjct: 681 KRSKCAFGVSSISYLGHIISEAGVAMDSAKVQAVADWPQPRSARAVRGFLGLAGYYRKFV 740

Query: 25  RGFGTMAA 2
           + +GT+AA
Sbjct: 741 QDYGTIAA 748



 Score = 20.8 bits (42), Expect(2) = 6e-14
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 258 LHHFSTILYILSTNQLFAK 202
           L H   +L +L  +QLF K
Sbjct: 663 LRHLRAVLTVLQHHQLFVK 681


>ref|XP_006599906.1| PREDICTED: uncharacterized protein LOC102659888 [Glycine max]
          Length = 656

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = -2

Query: 205 KMSKCRFGVLEVEYLGHLISFNGVVVDPSKIQSVLQCPIPSSAKGVCGFLGLVHYYRKFI 26
           +  KC FG  +VEYLGH+IS  GV V+P+K++SVL+ P P + KGV GFLGL  YYRKFI
Sbjct: 59  RREKCTFGQEQVEYLGHIISVRGVAVNPAKVKSVLEWPRPKNVKGVRGFLGLTGYYRKFI 118

Query: 25  RGFGTMA 5
             +G +A
Sbjct: 119 GDYGKIA 125