BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00050707
         (495 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   132   4e-29
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           132   4e-29
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   131   8e-29
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       130   1e-28
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   126   3e-27
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   126   4e-27
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   124   1e-26
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   122   7e-26
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   119   3e-25
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               119   3e-25
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   119   6e-25
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   118   7e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                117   2e-24
gb|AAC24057.1| Contains similarity to reverse transcriptase-like...   115   6e-24
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   115   6e-24
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   114   2e-23
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   113   3e-23
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   112   4e-23
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   112   5e-23
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   112   7e-23

>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  132 bits (333), Expect = 4e-29
 Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11   QAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLG 190
            + +D+F  WSGL VNK KS +F +GL+ + E    AA GF  G  P++YLGLPL+  KL 
Sbjct: 577  ETLDDFADWSGLKVNKDKSQLFQAGLDLS-ERITSAAYGFPAGTFPIRYLGLPLMCRKLR 635

Query: 191  MYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESI 370
            +    PL++ + ++L+SW S  LS+AGR  L+ SV+  +  +W   F +PKG ++KIES+
Sbjct: 636  IADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESL 695

Query: 371  MRRFMVAGSLN-RKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
              +F+ AGS++ RK S VSW D   P  EGGL  R   E NK
Sbjct: 696  CSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNK 737


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  132 bits (333), Expect = 4e-29
 Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11   QAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLG 190
            + +D+F  WSGL VNK KS +F +GL+ + E    AA GF  G  P++YLGLPL+  KL 
Sbjct: 577  ETLDDFADWSGLKVNKDKSQLFQAGLDLS-ERITSAAYGFPAGTFPIRYLGLPLMCRKLR 635

Query: 191  MYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESI 370
            +    PL++ + ++L+SW S  LS+AGR  L+ SV+  +  +W   F +PKG ++KIES+
Sbjct: 636  IADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESL 695

Query: 371  MRRFMVAGSLN-RKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
              +F+ AGS++ RK S VSW D   P  EGGL  R   E NK
Sbjct: 696  CSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNK 737


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  131 bits (330), Expect = 8e-29
 Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           I+A   F   +GL +N  K  +F  GLN      +   +GF  G LPV+YLG+PL   KL
Sbjct: 196 IKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKL 255

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
            ++H LPLV+ +V K++ W S LLS AGR  LVRS++ ++  YW   F +PK +++KI+S
Sbjct: 256 NVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDS 315

Query: 368 IMRRFMVAGSLN-RKFSLVSWEDISKPLKEGGLNI 469
           I R F+ +GS   ++ SLV+W+ + KP + GGLN+
Sbjct: 316 ICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNL 350


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  130 bits (328), Expect = 1e-28
 Identities = 67/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11   QAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLG 190
            + +D+F SWSGL VNK KS+++ +GLN  +E    AA GF  G LP++YLGLPL++ KL 
Sbjct: 717  ETLDDFASWSGLKVNKDKSHLYLAGLNQ-LESNANAAYGFPIGTLPIRYLGLPLMNRKLR 775

Query: 191  MYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESI 370
            +    PL++ + ++ +SW +  LS+AGR  L+ SV+     +W   F +PKG +++IES+
Sbjct: 776  IAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESL 835

Query: 371  MRRFMVAGSLNR-KFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
              RF+ +G++ + K   VSW  +  P  EGGL +R+  E NK
Sbjct: 836  CSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNK 877


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  126 bits (317), Expect = 3e-27
 Identities = 61/158 (38%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
 Frame = +2

Query: 23   NFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLGMYHC 202
            +F ++SGL+++  KS +F + +++    ++LA   F  G LPV+YLGLPL++ ++ +  C
Sbjct: 982  DFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADC 1041

Query: 203  LPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESIMRRF 382
            LPL++ + S++ SWK+  LS+AGR  L+ SV+ S+  +W  AF +P+  +R+IE I   F
Sbjct: 1042 LPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAF 1101

Query: 383  MVAGS-LNRKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
            + +G+ LN   + V+W D+ KP  EGGL +R   + NK
Sbjct: 1102 LWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANK 1139


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  126 bits (316), Expect = 4e-27
 Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
 Frame = +2

Query: 14   AMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLGM 193
            A  NF S S L  N  +S IF +G++    D++L  + FS G  PV+YLG+PLI++KL M
Sbjct: 546  AFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRM 605

Query: 194  YHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESIM 373
              C PL+D + ++++SW++ +LS+AGR  L++SV+ S+ +YW+    +PK +L+ IE  +
Sbjct: 606  QDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRL 665

Query: 374  RRFMVAGSLN-RKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
            R F+ AG+ + R  + V+W +I  P  EGGL I+  +  NK
Sbjct: 666  RCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNK 706


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/162 (37%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
 Frame = +2

Query: 8    IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
            I+  D F  WSGL ++  KS ++ +GL+    + +     FS G LPV+YLGLPLI+ +L
Sbjct: 722  IKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRL 781

Query: 188  GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                CLPL++ +  ++ SW S  LS+AGR  L+ SV+ S+  +W  AF +P+  +R++E 
Sbjct: 782  STTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEK 841

Query: 368  IMRRFMVAGS-LNRKFSLVSWEDISKPLKEGGLNIRKPYEVN 490
            +   F+ +G+ +N   + +SW  + KP  EGGL +R   E N
Sbjct: 842  MCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEAN 883


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  122 bits (305), Expect = 7e-26
 Identities = 57/157 (36%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
 Frame = +2

Query: 8    IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
            ++++++F  WSGL +N  K+ ++ +GL+ +  D++ A+ GF  G LPV+YLGLPL+S KL
Sbjct: 613  VESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSM-ASYGFKLGSLPVRYLGLPLMSRKL 671

Query: 188  GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
             +    PL++ + ++  SW   LLS+AGR  L+ SV+  +  +W  +F +P G ++KIES
Sbjct: 672  TIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIES 731

Query: 368  IMRRFMVAGSLNRK-FSLVSWEDISKPLKEGGLNIRK 475
            +  RF+ +  +++K  + V+W  +  P  EGG+ +R+
Sbjct: 732  LCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRR 768


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  119 bits (299), Expect = 3e-25
 Identities = 58/162 (35%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           ++  + F   SGL ++  KS ++F+GL+      ++A   F+ G LPV+YLGLPL++ +L
Sbjct: 104 VEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQL 163

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                LPL++ +  K+ SW +  LS+AGR  L+ SV+ S+  +W GAF +P+  +R+I+ 
Sbjct: 164 SSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDK 223

Query: 368 IMRRFM-VAGSLNRKFSLVSWEDISKPLKEGGLNIRKPYEVN 490
           +   ++   G LN   + ++W D+ KP  EGGL +R   E N
Sbjct: 224 MCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEAN 265


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           I+  D F  WSGL ++  KS IF +GL++     L     F  G LP++YLGLPL++ +L
Sbjct: 275 IEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRL 334

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                 PL++ +  ++ SW S  LS+AGR  L+ S++ S   +W  AF +P+  +++IE 
Sbjct: 335 SSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEK 394

Query: 368 IMRRFMVAG-SLNRKFSLVSWEDISKPLKEGGLNIRKPYEVN 490
           +   F+ +G +LN K + +SW  + KP  EGGL +R   E N
Sbjct: 395 LCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEAN 436


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  119 bits (297), Expect = 6e-25
 Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 1/155 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           ++A ++F   +GL VN  K ++  +G++   +  +L  SGF  G LP KYLG+P+ S KL
Sbjct: 93  MRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKL 152

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
              H  PL+D +V K++ W + LLS+AGR  LV SV+ ++  YW   F  PK +L+KIE+
Sbjct: 153 STIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEA 212

Query: 368 IMRRFMVAGSL-NRKFSLVSWEDISKPLKEGGLNI 469
           I R F+  G     + S V+W+ I  P   GGLNI
Sbjct: 213 ICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNI 247


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  118 bits (296), Expect = 7e-25
 Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
 Frame = +2

Query: 44  LHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLGMYHCLPLVDMM 223
           L  N  KS+IF  G+N++    L A  GFS G LPV+YLGLPL+  +L    C PL+  +
Sbjct: 1   LFANLAKSSIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRI 60

Query: 224 VSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESIMRRFMVAG-SL 400
            S+++SW + +LS+AGR  LVRSV++S+ +YW+  F +P  + R ++ I+R ++  G   
Sbjct: 61  TSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEE 120

Query: 401 NRKFSLVSWEDISKPLKEGGLNIR 472
            R  + V+W+++  P  EGGL IR
Sbjct: 121 GRGGAKVAWDEVCLPFDEGGLAIR 144


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  117 bits (293), Expect = 2e-24
 Identities = 59/163 (36%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           I     F   SGLH++  KS ++ +G++    + +L+A  F+ G LPV+YLGLPL++ ++
Sbjct: 295 INIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQM 354

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                 PL+D + SK+ SW +  LS+AGR  L+ SV+ S+  +W  A+ +P G +++IE 
Sbjct: 355 TTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEK 414

Query: 368 IMRRFMVAG-SLNRKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
           +   F+ +G  LN K + ++W  + K  +EGGL I+   E NK
Sbjct: 415 LCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANK 457


>gb|AAC24057.1| Contains similarity to reverse transcriptase-like protein
           gb|2244803 from A. thaliana chromosome 4 contig
           gb|Z97336 [Arabidopsis thaliana]
          Length = 404

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/152 (36%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           ++  ++F  WSGL ++  KS +F +G +     T+ +   FS G LPV+YLGLPL++ +L
Sbjct: 15  VRVFNDFALWSGLRISMEKSTLFLAGTSATAHQTITSTYPFSVGTLPVRYLGLPLVNKRL 74

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                LPL++ +  ++ SW +  LS+AGR  L+ SV+ S+  +W  AF +P+G +R+++ 
Sbjct: 75  SAADYLPLLEKIRQRIGSWTARFLSFAGRLNLISSVLWSICNFWMAAFRLPRGCIREVDK 134

Query: 368 IMRRFMVAG-SLNRKFSLVSWEDISKPLKEGG 460
           I   F+ +G  +    + VSW++I KP  EGG
Sbjct: 135 ICSAFLWSGQEMKTTKAKVSWQEICKPKHEGG 166


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  115 bits (288), Expect = 6e-24
 Identities = 59/163 (36%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
 Frame = +2

Query: 8    IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
            I     F   SGL ++  KS I+ +G++ +     L++  F++G LPV+YLGLPL++ ++
Sbjct: 1019 INVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQM 1078

Query: 188  GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                  PL++ + +K+ SW +  LS+AGR  L+ SV+ S+  +W  A+ +P G +R+IE 
Sbjct: 1079 TTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEK 1138

Query: 368  IMRRFMVAGS-LNRKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
            +   F+ +G  LN K + ++W  I +P KEGGL I+   E NK
Sbjct: 1139 LCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANK 1181


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/150 (36%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
 Frame = +2

Query: 8    IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
            ++ +  F  WSGL ++  KS ++ +G+  ++   ++    F  G LPV+YLGLPL+S +L
Sbjct: 610  VKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRL 669

Query: 188  GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                CLPL++ +  K+++W S  LS+AGR  L+ S + S+  +W  AF +P+  +R+I+ 
Sbjct: 670  TASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAFRLPRACIREIDK 729

Query: 368  IMRRFMVAGS-LNRKFSLVSWEDISKPLKE 454
            +   F+ +G+ L+   + VSWE I KP KE
Sbjct: 730  LCSAFLWSGTELSSNKAKVSWEAICKPKKE 759


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/163 (34%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
 Frame = +2

Query: 8    IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
            I    +F   SGLH++  KS ++ + ++    + +L+A  F+ G LPV+YLG PL++ ++
Sbjct: 864  INIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQM 923

Query: 188  GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                  PL+D + SK+ SW +  LS+AGR  L+ SV+ S+  +W  A+ +P G +++IE 
Sbjct: 924  TTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEK 983

Query: 368  IMRRFMVAG-SLNRKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
            +   F+ +G  LN K + ++W  + K  +EGGL I+   E NK
Sbjct: 984  LCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANK 1026


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  112 bits (281), Expect = 4e-23
 Identities = 59/162 (36%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           ++ M+ F   SGL +N  K+ ++ +G++      +++   F  G LPV+YLGLPL++ +L
Sbjct: 127 VEVMNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRL 186

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
                 PL + + +++ +W S  LS+AGR  L+ SV+ S   +W  AF +P   L++I S
Sbjct: 187 TKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINS 246

Query: 368 IMRRFMVAG-SLNRKFSLVSWEDISKPLKEGGLNIRKPYEVN 490
           I   F+ +G  L+R+ + VSW+DI KP +EGGL +R   E N
Sbjct: 247 ICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEAN 288


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
 Frame = +2

Query: 8   IQAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKL 187
           +   + F+   GLHVN  K NI+   ++  +++ LL  SGF  G +P +YLG+PL S KL
Sbjct: 535 LDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKL 594

Query: 188 GMYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIES 367
            + H   L+D +V ++  W + LLS+AGR  L++SV+ +   +W     +PK ++ +I +
Sbjct: 595 NIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINA 654

Query: 368 IMRRFMVAGSLN-RKFSLVSWEDISKPLKEGGLNI 469
           I R F+  G+ N  + S ++WE +  P   GGLNI
Sbjct: 655 ICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNI 689


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  112 bits (279), Expect = 7e-23
 Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11   QAMDNFVSWSGLHVNKGKSNIFFSGLNTAMEDTLLAASGFSHGFLPVKYLGLPLISAKLG 190
            +A+D+F SWSGLHVNK K+N++ +G +  +E   ++  GF    LP++YLGLPL+S KL 
Sbjct: 718  EALDDFASWSGLHVNKDKTNLYLAGTDE-VEALAISHYGFPISTLPIRYLGLPLMSRKLK 776

Query: 191  MYHCLPLVDMMVSKLQSWKSYLLSWAGRAILVRSVVQSMYIYWSGAFSIPKGILRKIESI 370
            +         +V + +SW    LS+AGR  L+ SV+  +  +W   F +  G ++KIES+
Sbjct: 777  ISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESL 831

Query: 371  MRRFMVAGSLN-RKFSLVSWEDISKPLKEGGLNIRKPYEVNK 493
              RF+ +GS++  K + ++W  +  P  EGG+ +R+    NK
Sbjct: 832  CSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVGLRRFTPWNK 873