BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00050690
         (284 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31012.3| unnamed protein product [Vitis vinifera]              127   1e-27
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   120   3e-25
emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]   118   7e-25
emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera]   107   1e-21
emb|CAN76841.1| hypothetical protein VITISV_004490 [Vitis vinifera]    91   2e-16
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]       84   2e-14
emb|CBI20118.3| unnamed protein product [Vitis vinifera]               83   4e-14
emb|CAN67457.1| hypothetical protein VITISV_039473 [Vitis vinifera]    82   6e-14
emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]    80   2e-13
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]    80   2e-13
emb|CAN61880.1| hypothetical protein VITISV_018026 [Vitis vinifera]    80   2e-13
emb|CAN84004.1| hypothetical protein VITISV_021420 [Vitis vinifera]    79   5e-13
emb|CAN60436.1| hypothetical protein VITISV_014041 [Vitis vinifera]    78   1e-12
emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]    77   2e-12
gb|ABF95712.1| retrotransposon protein, putative, Ty1-copia subc...    77   2e-12
emb|CAN83369.1| hypothetical protein VITISV_011463 [Vitis vinifera]    77   3e-12
emb|CAN65807.1| hypothetical protein VITISV_033388 [Vitis vinifera]    77   3e-12
emb|CAN67941.1| hypothetical protein VITISV_033155 [Vitis vinifera]    75   9e-12
emb|CAN74086.1| hypothetical protein VITISV_002099 [Vitis vinifera]    74   2e-11
emb|CDF77009.1| hypothetical transposable element-related protei...    74   3e-11

>emb|CBI31012.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score =  127 bits (320), Expect = 1e-27
 Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 8/101 (7%)
 Frame = -1

Query: 281 IEKESNCFFCKKKGHVKKDCTKFINGLRRK-------VFQSHLFVMNL-IWWIDSGSTIH 126
           I+K+  CFFCKKKGHVKK C KF N L +K        ++S++  +N   WWIDSGSTIH
Sbjct: 277 IKKDEKCFFCKKKGHVKKKCLKFQNWLEKKGNPTSFICYESNMVNVNTNTWWIDSGSTIH 336

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           ISN+LQGMQNL+KPV SEQ+I  GNKM SHVEAIGTC L L
Sbjct: 337 ISNSLQGMQNLRKPVTSEQFILSGNKMGSHVEAIGTCYLTL 377


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  120 bits (300), Expect = 3e-25
 Identities = 60/101 (59%), Positives = 75/101 (74%), Gaps = 8/101 (7%)
 Frame = -1

Query: 281 IEKESNCFFCKKKGHVKKDCTKFINGLRRK-------VFQSHLFVMNL-IWWIDSGSTIH 126
           I+K + CFFCKKKGH+KK+C  F   L +K        ++S++  +N+  WWIDSGSTIH
Sbjct: 202 IKKVAKCFFCKKKGHMKKNCPGFQKWLEKKGKSISLVCYESNMVSVNINTWWIDSGSTIH 261

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           I+N+LQGMQNL+KPV SEQ I  GNK+ SHVEAIGTCIL L
Sbjct: 262 IANSLQGMQNLRKPVGSEQSILSGNKLGSHVEAIGTCILTL 302


>emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]
          Length = 1851

 Score =  118 bits (296), Expect = 7e-25
 Identities = 61/101 (60%), Positives = 74/101 (73%), Gaps = 8/101 (7%)
 Frame = -1

Query: 281 IEKESNCFFCKKKGHVKKDCTKFINGLRRK-------VFQSHLF-VMNLIWWIDSGSTIH 126
           I+K + CFF KKKGH+KK CTKF   L +K        ++S++  V+   WWI SGSTIH
Sbjct: 231 IKKVNKCFFYKKKGHMKKGCTKFQKWLEKKGKPISFFCYESNMVDVIYNTWWIYSGSTIH 290

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           +SNTLQGMQNL+KP+ SEQ IY GNKMRSHVEA+GTC L L
Sbjct: 291 VSNTLQGMQNLRKPMPSEQCIYSGNKMRSHVEAVGTCNLVL 331


>emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera]
          Length = 1255

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
 Frame = -1

Query: 245 KGHVKKDCTKFINGLRRK-------VFQSHLFVMNL-IWWIDSGSTIHISNTLQGMQNLK 90
           KGHVKK C KF N L +K        ++S++  +N   WWIDSGSTIHISN+LQGMQNL+
Sbjct: 329 KGHVKKKCLKFQNWLEKKGNPTSFVCYESNMVNVNTNTWWIDSGSTIHISNSLQGMQNLR 388

Query: 89  KPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           KPV SEQ+I  GNKM SHVEAIGTC L L
Sbjct: 389 KPVTSEQFILSGNKMGSHVEAIGTCYLTL 417


>emb|CAN76841.1| hypothetical protein VITISV_004490 [Vitis vinifera]
          Length = 906

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = -1

Query: 188 FQSHLFVMNL-IWWIDSGSTIHISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCI 12
           ++S++  +N   WWIDSGSTIHISN+LQGMQNL+KPV++EQ+I  GNKM SHVEAIGTC 
Sbjct: 138 YESNMVNVNTNTWWIDSGSTIHISNSLQGMQNLRKPVKNEQFILSGNKMGSHVEAIGTCY 197

Query: 11  LPL 3
           L L
Sbjct: 198 LTL 200


>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
          Length = 931

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 9/97 (9%)
 Frame = -1

Query: 281 IEKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFV---MNLI------WWIDSGSTI 129
           I+KE  CFFCKK GH KKDC K      +K  + + FV   +NLI      WW+DSG+T 
Sbjct: 92  IKKEIKCFFCKKTGHFKKDCLKRKAWFEKKG-KHYSFVCSELNLIEVPNNTWWLDSGATT 150

Query: 128 HISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGT 18
           H+SN  QG  +++    +EQY+++GN+M++ +E IGT
Sbjct: 151 HVSNIKQGFSSIQPIRGAEQYLFMGNRMKALIEGIGT 187


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 8/91 (8%)
 Frame = -1

Query: 266 NCFFCKKKGHVKKDCTKFINGLRRK-------VFQSHLF-VMNLIWWIDSGSTIHISNTL 111
           +C+FC KKGHVKKDC K      ++        ++S+L  V +  WWIDSG+T H++N +
Sbjct: 618 SCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSNTWWIDSGATTHVTNLM 677

Query: 110 QGMQNLKKPVRSEQYIYLGNKMRSHVEAIGT 18
           QG    +KP  SE+++Y+GN+++  V A+GT
Sbjct: 678 QGFLTTRKPKESEKFLYMGNRLKVEVVAVGT 708


>emb|CAN67457.1| hypothetical protein VITISV_039473 [Vitis vinifera]
          Length = 558

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKV----FQSHLFVMNLI----WWIDSGSTIHI 123
           +KE  CFFCKK GH+KK CTK+     +K     F      + ++    WWID+G+T HI
Sbjct: 259 DKEITCFFCKKTGHIKKTCTKYATWREKKGTLLNFAGSKINLAIVPTDTWWIDTGATTHI 318

Query: 122 SNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           S T+QG    + P   E+YIY+GN  ++ V+ IG   L L
Sbjct: 319 SVTMQGCLRSRMPTNGERYIYVGNDKKAEVKTIGIFRLQL 358


>emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]
          Length = 1581

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLI---------WWIDSGSTIH 126
           +KE  CFFCKK GH+KK CTK+    R K      FV + I         WWID+G+T H
Sbjct: 655 DKEITCFFCKKAGHMKKTCTKYA-AWREKKGTLLNFVCSEINLAVVPTDTWWIDTGATTH 713

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           IS T+QG    + P   E+YIY+GN  ++ V+AIG   L L
Sbjct: 714 ISVTMQGCLRSRMPTDGERYIYVGNGNKAAVKAIGLFRLQL 754


>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
          Length = 1181

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLI---------WWIDSGSTIH 126
           +KE  CFFCKK GH+KK CTK+    R K      FV + I         WWID+G+T H
Sbjct: 102 DKEITCFFCKKAGHMKKTCTKYA-AWREKKGTLLNFVCSEINLAVVPTDTWWIDTGATTH 160

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           IS T+QG    + P   E+YIY+GN  ++ V+AIG   L L
Sbjct: 161 ISVTMQGCLRSRMPTDGERYIYVGNGNKAAVKAIGLFRLQL 201


>emb|CAN61880.1| hypothetical protein VITISV_018026 [Vitis vinifera]
          Length = 1001

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLI---------WWIDSGSTIH 126
           +KE  CFFCKK GH+KK CTK+    R K      FV + I         WWID+G+T H
Sbjct: 246 DKEITCFFCKKVGHMKKTCTKYA-AWREKKGTLLNFVCSKINLAVVPTDTWWIDTGATTH 304

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           IS T+QG    + P   E+YIY+GN  ++ V+AIG   L L
Sbjct: 305 ISVTIQGCLRSRMPTDGERYIYVGNGNKAAVKAIGLFRLQL 345


>emb|CAN84004.1| hypothetical protein VITISV_021420 [Vitis vinifera]
          Length = 532

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLI---------WWIDSGSTIH 126
           +KE  CFFCKK GH+KK CTK+    R K      FV + I         WWID+G+T H
Sbjct: 259 DKEITCFFCKKAGHMKKTCTKYA-AWREKKGTLLNFVCSEINLAVVPTDTWWIDTGATTH 317

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           IS T+QG    + P   E+YIY+GN  +  V+AIG   L L
Sbjct: 318 ISVTMQGCLRSRMPTDGERYIYVGNGNKVAVKAIGLFRLQL 358


>emb|CAN60436.1| hypothetical protein VITISV_014041 [Vitis vinifera]
          Length = 227

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 8/80 (10%)
 Frame = -1

Query: 281 IEKESNCFFCKKKGHVKKDCTKFINGLRRK-------VFQSHLFVMNL-IWWIDSGSTIH 126
           I+K+   FF KKKGHVKK C KF   L +K        ++S++  +N   WWIDSG TIH
Sbjct: 26  IKKDEKRFFYKKKGHVKKKCXKFQKWLEKKGNPTSFVCYESNMVNVNTNTWWIDSGFTIH 85

Query: 125 ISNTLQGMQNLKKPVRSEQY 66
           ISN+L+GMQ+L+KPVR   +
Sbjct: 86  ISNSLKGMQDLRKPVRKTSF 105


>emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]
          Length = 1193

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLI---------WWIDSGSTIH 126
           +KE  CFF KK GH+KK CTK+    R K      FV + I         WWID+G+T H
Sbjct: 109 DKEITCFFYKKAGHMKKTCTKYA-AWREKKGTLLNFVCSEINLAVVPTDTWWIDTGATTH 167

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           IS T+QG    + P+  E+YIY+GN  ++ V+AIG   L L
Sbjct: 168 ISVTMQGCLRSRMPIDGERYIYVGNGNKAAVKAIGLFRLQL 208


>gb|ABF95712.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 1057

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
 Frame = -1

Query: 272 ESNCFFCKKKGHVKKDCTKFINGLRRK--VFQSHLFVMNLI------WWIDSGSTIHISN 117
           E  C+FCKK+GH KK CTK+     +K  +F +    +NLI      WW+D+G+T+++S 
Sbjct: 245 EELCYFCKKEGHKKKKCTKYHAWRAKKGTIFATLCSEVNLISVSKHTWWLDTGATVNVSV 304

Query: 116 TLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGT 18
           T+QG  N +KP   E++I++G+     VEA+GT
Sbjct: 305 TMQGCLNCRKPSDVERFIFVGDGKPVEVEALGT 337


>emb|CAN83369.1| hypothetical protein VITISV_011463 [Vitis vinifera]
          Length = 1156

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLI---------WWIDSGSTIH 126
           +KE  CFFCKK GH+KK CTK+    R K      FV + I         WWID+G+T H
Sbjct: 211 DKEITCFFCKKTGHMKKTCTKY-TAWREKKGTLLNFVCSEINLAVVPTNTWWIDTGTTTH 269

Query: 125 ISNTLQGMQNLKKPVRSEQYIYLGNKMRSHVEAIGTCILPL 3
           IS T+QG    +     E+YIY+GN  +  V+AIG   L L
Sbjct: 270 ISVTMQGCLRSRMSTDDERYIYVGNGNKVAVKAIGLFRLQL 310


>emb|CAN65807.1| hypothetical protein VITISV_033388 [Vitis vinifera]
          Length = 1086

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/86 (44%), Positives = 50/86 (58%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLIWWIDSGSTIHISNTLQGMQ 99
           +K+   FFCKK GH+KK CTK+     +K       V    WWID G+T HIS T+QG  
Sbjct: 307 DKKITYFFCKKVGHMKKTCTKYAAWREKKAI-----VPTNTWWIDMGATTHISVTMQGCL 361

Query: 98  NLKKPVRSEQYIYLGNKMRSHVEAIG 21
             + P   E+YIY+GN  +  V+AIG
Sbjct: 362 RSRMPTNGERYIYVGNDNKVVVKAIG 387


>emb|CAN67941.1| hypothetical protein VITISV_033155 [Vitis vinifera]
          Length = 1033

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 35/87 (40%), Positives = 52/87 (59%)
 Frame = -1

Query: 263 CFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLIWWIDSGSTIHISNTLQGMQNLKKP 84
           C+   KKGH + DC KF N L +K  +         WW+DSG+T+H++ +LQG++NL+KP
Sbjct: 194 CYHYNKKGHKRVDCFKFKNWLEKKKKEQDS------WWLDSGATVHVATSLQGIRNLRKP 247

Query: 83  VRSEQYIYLGNKMRSHVEAIGTCILPL 3
              E  + +GN +   VE IG  +L L
Sbjct: 248 SEKESNLKVGNDIEIDVEHIGITVLEL 274


>emb|CAN74086.1| hypothetical protein VITISV_002099 [Vitis vinifera]
          Length = 570

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/83 (43%), Positives = 48/83 (57%)
 Frame = -1

Query: 278 EKESNCFFCKKKGHVKKDCTKFINGLRRKVFQSHLFVMNLIWWIDSGSTIHISNTLQGMQ 99
           +KE  CFF KK GH+KK CTK+ +   +K       V    WWID+ +T HIS T+QG  
Sbjct: 107 DKEIXCFFXKKGGHIKKTCTKYASWREKKAI-----VPXDTWWIDTSATTHISVTMQGCL 161

Query: 98  NLKKPVRSEQYIYLGNKMRSHVE 30
             + P   E+YIY+GN  +  VE
Sbjct: 162 RSRMPTDDERYIYVGNGNKVEVE 184


>emb|CDF77009.1| hypothetical transposable element-related protein, partial
           [Boechera divaricarpa]
          Length = 1350

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
 Frame = -1

Query: 272 ESNCFFCKKKGHVKKDCTKFI--NGLRRKVFQSHLFVMNLI------WWIDSGSTIHISN 117
           +  CFFCKK GH+KKDCTK+    G +          +NL+      WW+DSG+T +IS 
Sbjct: 243 DDTCFFCKKVGHMKKDCTKYHAWRGKKGSFLAMVCTEVNLVEVPKNTWWLDSGATTNISV 302

Query: 116 TLQGMQNLKKPVRSEQYIYLGNKMRSHVEAI 24
           +LQG  + +KP  +E+ IY+ N +   VEAI
Sbjct: 303 SLQGCLSYRKPTNAERRIYVANGIPVDVEAI 333