BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00050596
         (297 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   110   2e-22
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   107   2e-21
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]   106   4e-21
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   105   9e-21
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               99   6e-19
emb|CAN60807.1| hypothetical protein VITISV_044449 [Vitis vinifera]    95   9e-18
emb|CAN73380.1| hypothetical protein VITISV_032547 [Vitis vinifera]    92   6e-17
emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera]    92   8e-17
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...    92   1e-16
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    91   2e-16
emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]    90   3e-16
ref|XP_007014689.1| Uncharacterized protein TCM_040047 [Theobrom...    90   4e-16
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]    90   4e-16
emb|CAN77085.1| hypothetical protein VITISV_044282 [Vitis vinifera]    89   5e-16
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]    89   6e-16
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...    88   1e-15
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...    88   1e-15
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    88   1e-15
emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]    87   2e-15
emb|CAN65956.1| hypothetical protein VITISV_009071 [Vitis vinifera]    87   2e-15

>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/89 (58%), Positives = 66/89 (74%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+    + G DK++VG+G  L I HTG +F PSSS+  QL+ VLHVP I +NLISVS+FC
Sbjct: 395 LSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFC 454

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGS 30
            DNN F EFHP FF VK+ ++KK+LLQGS
Sbjct: 455 ADNNTFFEFHPRFFFVKDQVTKKILLQGS 483


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/89 (59%), Positives = 68/89 (76%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           LNSH  FAG+DK++VG+G  L IS+ GHS I S SR L L+N+LHVPQ+ +NLISV++ C
Sbjct: 317 LNSHTPFAGSDKVMVGNGNRLNISNIGHSTISSVSRSLNLKNILHVPQLTTNLISVNRLC 376

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGS 30
            DNNV +EF  + FVVK+  SKK LLQG+
Sbjct: 377 TDNNVTVEFFTNGFVVKDQASKKALLQGN 405


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/89 (57%), Positives = 65/89 (73%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+    + G DK++VG+G  L I HT  +F PSSS+  QL+ VLHVP I +NLISVS+FC
Sbjct: 47  LSDVQPYMGNDKVIVGNGKHLRILHTYTTFFPSSSKIFQLRQVLHVPDIATNLISVSQFC 106

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGS 30
            DNN F EFHP FF VK+ ++KK+LLQGS
Sbjct: 107 ADNNTFFEFHPRFFFVKDQVTKKILLQGS 135


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  105 bits (261), Expect = 9e-21
 Identities = 47/88 (53%), Positives = 67/88 (76%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+ HN F+G DK++VG+G  L + HTGHS IP+S   L L+NVLHVP+I +NL+SV K C
Sbjct: 384 LSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVPKIAANLVSVQKLC 443

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQG 33
            DNN ++EF+PS+F VK+  ++ +LL+G
Sbjct: 444 HDNNAYVEFYPSYFAVKDQKTQAILLKG 471


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = -2

Query: 293 NSHN--QFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKF 120
           N HN   + G D ++V +G +L I+  GHSF+ +S++P  L NVL+VPQ+ SNLISVSKF
Sbjct: 462 NIHNGTPYNGTDSVMVDNGKSLPITQVGHSFLHTSAKPFVLHNVLYVPQLTSNLISVSKF 521

Query: 119 CLDNNVFLEFHPSFFVVKNLISKKVLLQGST*ERSLF 9
           C DNN  +EFHPS F VK+  +K  LLQG   ER L+
Sbjct: 522 CTDNNTIMEFHPSSFFVKDKDTKVTLLQGQL-ERGLY 557


>emb|CAN60807.1| hypothetical protein VITISV_044449 [Vitis vinifera]
          Length = 439

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/88 (51%), Positives = 63/88 (71%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           LN+   F+G+D++ VG+G  L ISH G + +PSS  PL L  V H P+  +NLISV+K C
Sbjct: 33  LNTMTSFSGSDQVTVGNGKQLHISHLGTAKLPSSYSPLVLHQVYHTPKFSNNLISVTKLC 92

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQG 33
            DN VF+EF+ + F+VK+ +SK+VLLQG
Sbjct: 93  YDNKVFVEFYATHFLVKDRVSKRVLLQG 120


>emb|CAN73380.1| hypothetical protein VITISV_032547 [Vitis vinifera]
          Length = 599

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 42/82 (51%), Positives = 60/82 (73%)
 Frame = -2

Query: 278 FAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFCLDNNVF 99
           F G ++++VG+G  + ISH G+S +  SS PL+L N+LH P + + +ISVSK C DN  F
Sbjct: 463 FIGNEQVMVGNGKKIPISHYGNSLLSFSSSPLKLNNILHAPALSNKIISVSKLCADNTTF 522

Query: 98  LEFHPSFFVVKNLISKKVLLQG 33
           +EF+  FF+VK+ +SKKVLLQG
Sbjct: 523 VEFYHDFFLVKDQVSKKVLLQG 544


>emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera]
          Length = 499

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 43/90 (47%), Positives = 63/90 (70%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+ H  + G+D +++GDGT L ISHTG +F+PSS+    L +VL+V  ++ NLIS+S+FC
Sbjct: 361 LSLHAPYTGSDDVMIGDGTGLLISHTGSAFLPSSTTTFTLNDVLYVSSMKKNLISISQFC 420

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGST 27
           + NN  +EF PS F VK+L    +LL G+T
Sbjct: 421 ISNNASVEFLPSCFHVKDLRIGAILLTGNT 450


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
           sativa Japonica Group]
           gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
           protein [Oryza sativa Japonica Group]
          Length = 1219

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 40/97 (41%), Positives = 63/97 (64%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L +  ++ G D+I    G  + I H GHS++P+SSRPL L+N+LHVP+   NLISV +  
Sbjct: 331 LTTREKYKGTDQIHTASGEGMDIQHIGHSYVPTSSRPLHLKNILHVPKASKNLISVHRLV 390

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGST*ERSLFP 6
            DN  FLE H  +F++K+ ++++ +L+G    R L+P
Sbjct: 391 ADNYAFLEIHQKYFLIKDKVTRRTILEGPC-RRDLYP 426


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/88 (46%), Positives = 62/88 (70%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L  H+++ G D+I+  +GT + IS+ G++ +P+SSR L L++VLHVP    NLISV +  
Sbjct: 340 LTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSLHLRSVLHVPSTHKNLISVHRLT 399

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQG 33
            DN+VF+EFH S F++K+  +K VLL G
Sbjct: 400 NDNDVFIEFHSSHFLIKDRQTKAVLLHG 427


>emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]
          Length = 1092

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 44/97 (45%), Positives = 65/97 (67%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+ H+++ G D++V+GDGT L I+H G + + S SR L L+  LHVP I  NLIS  KF 
Sbjct: 217 LSIHSEYEGQDEVVLGDGTGLQIAHIGSTTLSSPSRSLMLKETLHVPLIHKNLISXHKFT 276

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGST*ERSLFP 6
            DNNV +EFHP F++VK+ ++   L++G   E  ++P
Sbjct: 277 HDNNVTIEFHPFFYLVKDRMTGAXLMRGRC-ENGVYP 312


>ref|XP_007014689.1| Uncharacterized protein TCM_040047 [Theobroma cacao]
           gi|508785052|gb|EOY32308.1| Uncharacterized protein
           TCM_040047 [Theobroma cacao]
          Length = 678

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 41/78 (52%), Positives = 58/78 (74%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+ + ++ G +KI VG GT+L I+H G S I ++++PL+L NVLHVP +  NLIS+SKFC
Sbjct: 58  LSLYTEYGGLEKIAVGGGTSLSINHIGFSIISTTNKPLKLTNVLHVPVMNRNLISISKFC 117

Query: 116 LDNNVFLEFHPSFFVVKN 63
             NNVF+EF P  F+VK+
Sbjct: 118 KTNNVFVEFFPFHFLVKD 135


>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
          Length = 515

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = -2

Query: 278 FAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFCLDNNVF 99
           ++G +++ +GDG +L I HTG       S+   L  VLHVP + +NLISVSKFC+DN VF
Sbjct: 341 YSGTNQVTIGDGNSLPILHTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFCMDNAVF 400

Query: 98  LEFHPSFFVVKNLISKKVLLQG 33
            EFH S+F VK+ ++KK+LL+G
Sbjct: 401 FEFHFSYFFVKDQVTKKILLKG 422


>emb|CAN77085.1| hypothetical protein VITISV_044282 [Vitis vinifera]
          Length = 1520

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/90 (50%), Positives = 61/90 (67%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L+ H ++ G D++V+GDGT L I++ G   + S SR L L+  LHVP IR NLI V KF 
Sbjct: 288 LSIHFEYEGQDEVVLGDGTGLQIAYIGSITLSSLSRSLMLKETLHVPLIRKNLIYVHKFT 347

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGST 27
            DNNV +EFHP F++VK+ I   VL+ GS+
Sbjct: 348 HDNNVTIEFHPFFYLVKDRIMGAVLMHGSS 377


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = -2

Query: 278 FAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFCLDNNVF 99
           ++G D++ +GDG +L I +TG       S+   L  VLHVP + +NLISVSKFC DN VF
Sbjct: 369 YSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFCTDNAVF 428

Query: 98  LEFHPSFFVVKNLISKKVLLQG 33
            EFH S+F VK+ ++KK+LL+G
Sbjct: 429 FEFHSSYFFVKDQVTKKILLKG 450


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1202

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/97 (40%), Positives = 60/97 (61%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L +  ++ G D+I    G  + I H GH+ +P+ SRPL L+NVLHVP+   NL+SV K  
Sbjct: 339 LTTKERYKGTDQIHTASGEGMSIKHVGHAIVPTPSRPLHLKNVLHVPEAAKNLVSVHKLV 398

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGST*ERSLFP 6
            DN  FLE H  +F++K+  +++ +L+G    R L+P
Sbjct: 399 ADNYAFLEIHGKYFLIKDKATRRTILEGPC-RRGLYP 434


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|31433472|gb|AAP54977.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1031

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/97 (40%), Positives = 60/97 (61%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L +  ++ G D+I    G  + I H GH+ +P+ SRPL L+NVLHVP+   NL+SV K  
Sbjct: 339 LTTKERYKGTDQIHTASGEGMSIKHVGHAIVPTPSRPLHLKNVLHVPEAAKNLVSVHKLV 398

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQGST*ERSLFP 6
            DN  FLE H  +F++K+  +++ +L+G    R L+P
Sbjct: 399 ADNYAFLEIHGKYFLIKDKATRRTILEGPC-RRGLYP 434


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/88 (48%), Positives = 60/88 (68%)
 Frame = -2

Query: 296 LNSHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFC 117
           L +   + GADK+ +G+G  L IS+TG + + S+    QL+ V HVP I +NLISV+KFC
Sbjct: 359 LTNATPYTGADKVTIGNGKHLTISNTGFTRLFSNPHSFQLKKVFHVPFISANLISVAKFC 418

Query: 116 LDNNVFLEFHPSFFVVKNLISKKVLLQG 33
            DNN  +EFH + F VK+L +K+VL QG
Sbjct: 419 SDNNALIEFHSNGFFVKDLHTKRVLAQG 446


>emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]
          Length = 828

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/80 (51%), Positives = 54/80 (67%)
 Frame = -2

Query: 272 GADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFCLDNNVFLE 93
           G D++ +GD  +L I HTG       S+   L  VLHVP + +NLISVSKFC DN VF E
Sbjct: 274 GTDQVTIGDSNSLPILHTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFCTDNVVFFE 333

Query: 92  FHPSFFVVKNLISKKVLLQG 33
           FH S+F VK+ ++KK+LL+G
Sbjct: 334 FHSSYFFVKDQVTKKILLKG 353


>emb|CAN65956.1| hypothetical protein VITISV_009071 [Vitis vinifera]
          Length = 474

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = -2

Query: 290 SHNQFAGADKIVVGDGTALCISHTGHSFIPSSSRPLQLQNVLHVPQIRSNLISVSKFCLD 111
           +H    G+D +++GDGT L ISHTG + +PSS+    L + L VP ++ NLIS+S+FC+ 
Sbjct: 17  THASTTGSDDVMIGDGTGLLISHTGSASLPSSTTTFTLNDALCVPSMKKNLISISQFCIS 76

Query: 110 NNVFLEFHPSFFVVKNLISKKVLLQGST 27
           NN  +EF PS F VK+L +  +LL G+T
Sbjct: 77  NNASVEFLPSCFHVKDLRTGAILLTGNT 104