BLASTX nr result
ID: Cocculus23_contig00050518
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00050518
(699 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007019279.1| Pentatricopeptide repeat (PPR) superfamily p... 95 3e-20
ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citr... 92 5e-20
ref|XP_002302206.2| pentatricopeptide repeat-containing family p... 93 1e-19
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-19
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 91 3e-19
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat... 91 3e-19
ref|XP_002520265.1| pentatricopeptide repeat-containing protein,... 94 1e-18
ref|XP_006364856.1| PREDICTED: putative pentatricopeptide repeat... 90 3e-18
ref|XP_004237912.1| PREDICTED: putative pentatricopeptide repeat... 88 1e-17
ref|XP_002887666.1| pentatricopeptide repeat-containing protein ... 84 2e-16
ref|XP_006390130.1| hypothetical protein EUTSA_v10018228mg [Eutr... 81 9e-16
gb|EYU32473.1| hypothetical protein MIMGU_mgv1a023907mg [Mimulus... 80 1e-15
ref|XP_006301154.1| hypothetical protein CARUB_v10021551mg [Caps... 80 4e-15
ref|NP_177827.1| pentatricopeptide repeat-containing protein [Ar... 78 9e-15
gb|EXB42572.1| Putative pentatricopeptide repeat-containing prot... 79 4e-14
ref|XP_004299926.1| PREDICTED: putative pentatricopeptide repeat... 78 4e-14
ref|XP_007224179.1| hypothetical protein PRUPE_ppa016584mg [Prun... 84 6e-14
ref|XP_004502561.1| PREDICTED: putative pentatricopeptide repeat... 72 8e-13
ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat... 72 2e-12
ref|XP_007137505.1| hypothetical protein PHAVU_009G132600g [Phas... 69 1e-11
>ref|XP_007019279.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508724607|gb|EOY16504.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 675
Score = 95.1 bits (235), Expect(2) = 3e-20
Identities = 65/159 (40%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G + G+ I M K E+ NS LMG +T + + L LF EMRNAG
Sbjct: 471 LVDFYCKCGLVEYGKKIFDTMTKSDEISWNSMLMGYATNGHGFEALALFNEMRNAGARPT 530
Query: 436 DI------SPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFL 597
DI S L++ GR+W + + ++ H +YSC++DL A AG L
Sbjct: 531 DITFTGVLSACDHCGLLE---EGRKWFDSMKWD----YHIDPGIEHYSCMVDLYARAGCL 583
Query: 598 KDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
++ NLIEQMPF+ DVS RGC+A G KSLG KV+
Sbjct: 584 EEAMNLIEQMPFKEDVSLWSSVLRGCVAHGDKSLGKKVA 622
Score = 30.0 bits (66), Expect(2) = 3e-20
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS + LG Q+ FA T+I LESDQ+IST
Sbjct: 441 ASISCIELGEQV-FAKATLIGLESDQVIST 469
>ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citrus clementina]
gi|557536449|gb|ESR47567.1| hypothetical protein
CICLE_v10000495mg [Citrus clementina]
Length = 681
Score = 92.4 bits (228), Expect(2) = 5e-20
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G I+ G+ + M+K E+ NS LMG +T D L LF EMRN GV
Sbjct: 477 LVDFYCKCGFIKSGRILFDAMIKSDEISWNSMLMGYATNGQGYDALALFNEMRNTGVKPT 536
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFLKDT 606
I+ + G++W + + + H +YSC++DL A AG L +
Sbjct: 537 IITFTAILSACDHCGLVKEGQKWFDAMKWQ----YHIDPEIEHYSCMVDLFARAGCLNEA 592
Query: 607 KNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
NLIEQMPFEADV RGC+A G K LG KV+
Sbjct: 593 VNLIEQMPFEADVGMWSSILRGCVAHGDKGLGRKVA 628
Score = 32.0 bits (71), Expect(2) = 5e-20
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +3
Query: 135 RLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIST 254
R+ K+ S CA L LG Q+ FA T+I L+SDQIIST
Sbjct: 433 RMDKFSLASVISACANISSLELGEQV-FARVTIIGLDSDQIIST 475
>ref|XP_002302206.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344485|gb|EEE81479.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 681
Score = 92.8 bits (229), Expect(2) = 1e-19
Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G I G+ + M+K E+ NS LMG +T + + L LF EMR+AGV
Sbjct: 477 LVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPT 536
Query: 436 DI------SPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFL 597
+I S L++ W RW + ++ H +YSC++DL A AG L
Sbjct: 537 EITFTGVLSACDHCGLVKEGW---RWFNIMQYD----YHIDPGIEHYSCMVDLFARAGCL 589
Query: 598 KDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
++ NLI++MPFEAD S RGCMA G+K LG KV+
Sbjct: 590 EEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVA 628
Score = 30.4 bits (67), Expect(2) = 1e-19
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG QI FA TV+ L+SD++IST
Sbjct: 447 ASISSLELGEQI-FARATVVGLDSDEVIST 475
>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 1390
Score = 90.9 bits (224), Expect(2) = 1e-19
Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G I+ G+ + M+K E+ NS LMG +T + L LF EMRN GV
Sbjct: 1186 LVDFYCKCGFIKNGRILFDAMIKSDEISWNSMLMGYATNGQGYEALALFNEMRNTGVKPT 1245
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFLKDT 606
I+ + G++W + + + H +YSC++DL A AG L +
Sbjct: 1246 IITFTAILSACDHCGLVKEGQKWFDAMKWQ----YHIDPEIEHYSCMVDLFARAGCLNEA 1301
Query: 607 KNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
NLIEQMPFEADV RGC+A G K LG KV+
Sbjct: 1302 VNLIEQMPFEADVGMWSSILRGCVAHGDKGLGRKVA 1337
Score = 32.0 bits (71), Expect(2) = 1e-19
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +3
Query: 135 RLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIST 254
R+ K+ S CA L LG Q+ FA T+I L+SDQIIST
Sbjct: 1142 RMDKFSLASVISACANISSLELGEQV-FARVTIIGLDSDQIIST 1184
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 90.9 bits (224), Expect(2) = 3e-19
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G + G+ + M+K EVP NS LMG +T + + L +F++MR+ GV
Sbjct: 478 LVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPT 537
Query: 436 DI------SPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFL 597
DI S L++ GR+W + + H +YSC++DL A AG L
Sbjct: 538 DITFVGVLSACDHCGLVE---EGRKWFYAMKLD----YHINPGIEHYSCMVDLYARAGLL 590
Query: 598 KDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
+D NLIEQMP +AD S RGC+A G LG KV+
Sbjct: 591 EDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVA 629
Score = 30.8 bits (68), Expect(2) = 3e-19
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG QI FA T+I LE DQIIST
Sbjct: 448 ASISSLELGEQI-FARATIIGLEFDQIIST 476
>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 90.9 bits (224), Expect(2) = 3e-19
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G + G+ + M+K EVP NS LMG +T + + L +F++MR+ GV
Sbjct: 478 LVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPT 537
Query: 436 DI------SPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFL 597
DI S L++ GR+W + + H +YSC++DL A AG L
Sbjct: 538 DITFVGVLSACDHCGLVE---EGRKWFYAMKLD----YHINPGIEHYSCMVDLYARAGLL 590
Query: 598 KDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
+D NLIEQMP +AD S RGC+A G LG KV+
Sbjct: 591 EDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVA 629
Score = 30.8 bits (68), Expect(2) = 3e-19
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG QI FA T+I LE DQIIST
Sbjct: 448 ASISSLELGEQI-FARATIIGLEFDQIIST 476
>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 681
Score = 94.4 bits (233), Expect(2) = 1e-18
Identities = 62/156 (39%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G I G+ + M+K EV NS LMG +T Y + L LF EM+ AG+
Sbjct: 478 LVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPT 537
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFLKDT 606
DI+ + GR+W + ++ H +YSC++DL A AG LK+
Sbjct: 538 DITFTGVLSACDHCGLVEEGRKWFNIMKYD----YHIDPGIEHYSCMVDLFARAGCLKEA 593
Query: 607 KNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
NL+E MPFEAD S RGC+A G K LG KV+
Sbjct: 594 LNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVA 629
Score = 25.4 bits (54), Expect(2) = 1e-18
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 135 RLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIST 254
R+ ++ S CA L LG Q+ FA + LESDQ +ST
Sbjct: 434 RMDRFSLASVISACACISSLELGEQV-FARAIITGLESDQAVST 476
>ref|XP_006364856.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Solanum tuberosum]
Length = 685
Score = 89.7 bits (221), Expect(2) = 3e-18
Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+D YC+ G + + + + M+K EV NS LMG +T Y + L LF EMR+AGVS
Sbjct: 481 LIDFYCKCGFVSDARKLFDQMMKSDEVSWNSMLMGYATNGYGNEALNLFHEMRSAGVSPT 540
Query: 436 DI------SPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFL 597
+I S L++ G+RW ++ H +YSC++DL A AG L
Sbjct: 541 NITFIGVLSACDHCGLLE---EGKRW----FYSMNYDYHIDPGIEHYSCMVDLYARAGCL 593
Query: 598 KDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
++ NLIE+MPF+AD S RGC+A G K LG V+
Sbjct: 594 EEAVNLIEKMPFDADSSMWLSILRGCVAHGNKILGQLVA 632
Score = 28.5 bits (62), Expect(2) = 3e-18
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 132 FRLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIST 254
FR+ K+ S CA + LG QI FA +I ++ DQIIST
Sbjct: 436 FRMDKFSFSSVISACASIASVELGEQI-FARAVIIGIDCDQIIST 479
>ref|XP_004237912.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like isoform 1 [Solanum
lycopersicum] gi|460384427|ref|XP_004237913.1|
PREDICTED: putative pentatricopeptide repeat-containing
protein At1g77010, mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 685
Score = 87.8 bits (216), Expect(2) = 1e-17
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+D YC+ G + + + + M+K EV NS LMG +T Y + L LF EMR+ GVS
Sbjct: 481 LIDFYCKCGFVSDARKLFDQMMKSDEVSWNSMLMGYATNGYGNEALNLFHEMRSVGVSPT 540
Query: 436 DI------SPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFL 597
+I S L++ G+RW ++ H +YSC++DL A AG L
Sbjct: 541 NITFIGVLSACDHCGLLE---EGKRW----FYSMNYDYHIDPGIEHYSCMVDLYARAGCL 593
Query: 598 KDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
++ NLI++MPFEAD S RGC+A G K LG V+
Sbjct: 594 EEAVNLIKKMPFEADSSMWLSILRGCVAHGNKILGQLVA 632
Score = 28.5 bits (62), Expect(2) = 1e-17
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 132 FRLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIST 254
FR+ K+ S CA + LG QI FA +I L+ DQII+T
Sbjct: 436 FRMDKFSFSSVISACASIASVELGEQI-FARVVIIGLDGDQIITT 479
>ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333507|gb|EFH63925.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 675
Score = 83.6 bits (205), Expect(2) = 2e-16
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+DLYC+ G + G+ + M+K EVP NS + G +T + + ++LF++M AG+
Sbjct: 471 LIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPT 530
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRALHR-AKN*GNYSCIIDLRAWAGFLKDTKN 612
I+ L + G + +LF + H + ++SC++DL A AG++++ +
Sbjct: 531 QIT--FMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAID 588
Query: 613 LIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
L+E+MPF+AD S RGC+A G K++G KV+
Sbjct: 589 LVEEMPFDADASMWSSVLRGCVANGYKAMGKKVA 622
Score = 28.5 bits (62), Expect(2) = 2e-16
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG Q+ FA T++ L+SDQI+S+
Sbjct: 441 ASISSLGLGEQV-FARATIVGLDSDQIVSS 469
>ref|XP_006390130.1| hypothetical protein EUTSA_v10018228mg [Eutrema salsugineum]
gi|557086564|gb|ESQ27416.1| hypothetical protein
EUTSA_v10018228mg [Eutrema salsugineum]
Length = 675
Score = 80.9 bits (198), Expect(2) = 9e-16
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+DLYC+ G + + + + M+K E+P NS + G +T Y + ++LF++M +G+
Sbjct: 471 LIDLYCKCGSVEDARRVFDTMVKSDEIPWNSMISGYATNGYGFEAIDLFKKMYVSGIRPT 530
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GN--------YSCIIDLRAWAG 591
I+ C L E R L A N +SC+IDL A AG
Sbjct: 531 RITFMGVLTACN---------YCGLVEEGRKLFAAMKLDNGFVPDREHFSCMIDLLARAG 581
Query: 592 FLKDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
+L++ L+E+MPF+AD S RGC+A G K++G KV+
Sbjct: 582 YLEEAIALVEEMPFDADASMWSSVLRGCVANGYKAMGKKVA 622
Score = 29.3 bits (64), Expect(2) = 9e-16
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG Q+ FA T++ L+SDQI+S+
Sbjct: 441 ASISSLELGEQV-FARATIVGLDSDQIVSS 469
>gb|EYU32473.1| hypothetical protein MIMGU_mgv1a023907mg [Mimulus guttatus]
Length = 620
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+D YC+ G +R GQ + M KF EV NS L+G +T + + L LF+EMR V+
Sbjct: 416 LIDFYCKCGLVRNGQKLFDQMTKFDEVVWNSMLVGYATNGFGIEALSLFQEMRRVNVTPN 475
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRALHRAKN*G--NYSCIIDLRAWAGFLK 600
+++ + G++W ++ NE N G +YSC+IDL A AG LK
Sbjct: 476 EVTFTAVLSACDHCGLVEEGKKWFY-VMKNEY-----CINPGIEHYSCMIDLFARAGCLK 529
Query: 601 DTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
+ +LI+++PF++D + RGC+ G+KSL KV+
Sbjct: 530 EAIDLIDEIPFQSDATMWSAVLRGCIENGEKSLSLKVA 567
Score = 29.6 bits (65), Expect(2) = 1e-15
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 138 LQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIST 254
+ KY + + CA L LG QI FA TVI ++SDQ+I+T
Sbjct: 373 MDKYSLASAITACAGIASLELGEQI-FARATVIGVDSDQVIAT 414
>ref|XP_006301154.1| hypothetical protein CARUB_v10021551mg [Capsella rubella]
gi|482569864|gb|EOA34052.1| hypothetical protein
CARUB_v10021551mg [Capsella rubella]
Length = 696
Score = 80.1 bits (196), Expect(2) = 4e-15
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 14/161 (8%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+DLYC+ G + G+ + M+K EVP NS + G +T + ++LF++M AG
Sbjct: 492 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGRGFEAIDLFKKMNVAG---- 547
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*GN--------YSCIIDLRAWAG 591
I P++ +++ C L E R A N +SC++DL A AG
Sbjct: 548 -IKPTRITFMVVLT----ACNYCGLVEEGRNFFEAMKLDNGFVPDKEHFSCMVDLLARAG 602
Query: 592 FLKDTKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
++++ +L+E+MPF+AD S RGC+A G K++G KV+
Sbjct: 603 YVEEAIDLVEEMPFDADASMWSSVLRGCIANGHKAMGKKVA 643
Score = 27.7 bits (60), Expect(2) = 4e-15
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
A+ +L LG Q+ FA T++ L+SDQ++S+
Sbjct: 462 ATISSLELGEQV-FARATIVGLDSDQVVSS 490
>ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein
[Arabidopsis thaliana] gi|332197804|gb|AEE35925.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 695
Score = 77.8 bits (190), Expect(2) = 9e-15
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+DLYC+ G + G+ + M+K EVP NS + G +T + ++LF++M AG+
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRALHR-AKN*GNYSCIIDLRAWAGFLKDTKN 612
I+ L + G + LF + H + ++SC++DL A AG++++ N
Sbjct: 551 QIT--FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 613 LIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
L+E+MPF+ D S RGC+A G K++G K +
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAA 642
Score = 28.9 bits (63), Expect(2) = 9e-15
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG Q+ FA T++ L+SDQ++S+
Sbjct: 461 ASISSLELGEQV-FARATIVGLDSDQVVSS 489
>gb|EXB42572.1| Putative pentatricopeptide repeat-containing protein [Morus
notabilis]
Length = 951
Score = 79.3 bits (194), Expect(2) = 4e-14
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
L+D YC+ G + GQ I M++ EVP N+ L G +T + + L LF EM AGV
Sbjct: 513 LLDFYCKCGLVENGQKIFDRMMRCDEVPWNAMLTGYATNGHGLEALALFNEMLQAGVLPN 572
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFLKDT 606
I+ + GRRW ++ + + +Y+ +IDL + AG L++
Sbjct: 573 GITFTGVLCACDHCGLVEEGRRW----FYSMKCDYNIDPSIEHYAGMIDLFSRAGCLEEA 628
Query: 607 KNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
N+IE+MPF+ADVS RGC+A G KSLG KV+
Sbjct: 629 MNMIEKMPFKADVSMLSSVLRGCVANGHKSLGKKVA 664
Score = 25.0 bits (53), Expect(2) = 4e-14
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +3
Query: 135 RLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIS 251
++ K+ + S CA L G QI FA +I LE D+IIS
Sbjct: 469 KMDKFSVASAISACAGISSLEFGEQI-FARAVIIGLEHDEIIS 510
>ref|XP_004299926.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 682
Score = 78.2 bits (191), Expect(2) = 4e-14
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G + + + M+K EVP NS L+G +T + ++ L LF EMR AGV
Sbjct: 478 LVDFYCKCGLVENARKLFDRMMKSNEVPWNSMLIGYATNGHGSEALALFNEMRLAGVKPN 537
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRALHRAKN*GNYSCIIDLRAWAGFLKDT 606
+I+ + GR+W + + H +Y+C+IDL + AG L++
Sbjct: 538 EITFTGVLSACDHCGLVEEGRKW----FYKMKQDYHIDPYIEHYACMIDLFSRAGCLEEA 593
Query: 607 KNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
+L+E MPFE D S RGC++ G K L K++
Sbjct: 594 ISLVEAMPFELDASILSSVLRGCVSHGHKDLAKKMA 629
Score = 26.2 bits (56), Expect(2) = 4e-14
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +3
Query: 135 RLQKY*SCQSASNCA----LRLGMQIIFAHTTVICLESDQIIS 251
R+ K+ S+CA L G Q+ FA T+I L+ D+I+S
Sbjct: 434 RMDKFSLASVLSSCASISSLEYGEQV-FARATIIGLDDDEIVS 475
>ref|XP_007224179.1| hypothetical protein PRUPE_ppa016584mg [Prunus persica]
gi|462421115|gb|EMJ25378.1| hypothetical protein
PRUPE_ppa016584mg [Prunus persica]
Length = 615
Score = 83.6 bits (205), Expect = 6e-14
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVDLYC+ G ++ G+ + M K EV NS L+G +T + + L LF EMR AGV
Sbjct: 411 LVDLYCKCGFVKNGRELFDRMAKSNEVAWNSMLIGYATNGHGIEALALFNEMRLAGVEPN 470
Query: 436 DISPSQAFYLMQPQW---SGRRWKECILFNETRA-LHRAKN*GNYSCIIDLRAWAGFLKD 603
+I+ + GR+W F++ + H +Y+C+IDL + AGFL++
Sbjct: 471 EITFTGVLSACDHCGLVEDGRKW-----FSKMKQDYHINPGIEHYACMIDLLSRAGFLEE 525
Query: 604 TKNLIEQMPFEADVS-----ARGCMARGKKSLGNKVS 699
NL+E MPF+AD S RGC+A K LG K++
Sbjct: 526 AVNLVEVMPFKADASILSSVLRGCVAHEHKDLGKKMA 562
>ref|XP_004502561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Cicer arietinum]
Length = 672
Score = 72.4 bits (176), Expect(2) = 8e-13
Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G + G+ + M+K EV N+ LMG +T Y + L LF EMR +GV
Sbjct: 468 LVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALRLFNEMRYSGVRPS 527
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRAL-HRAK-----N*G--NYSCIIDLRAWAG 591
I+ + C L E R L H K N G ++SC++DL A AG
Sbjct: 528 AITFTGVLSACD---------HCGLVEEGRNLFHTMKHEYDINPGIEHHSCMVDLFARAG 578
Query: 592 FLKDTKNLIEQMPFEADVS-----ARGCMARGKKSLG 687
+ NLIE+MPF+ D + RGC++ G K+ G
Sbjct: 579 CFGEAMNLIEEMPFQPDANMWLSVLRGCISHGNKTTG 615
Score = 27.7 bits (60), Expect(2) = 8e-13
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG Q+ F + LESDQIIST
Sbjct: 438 ASKSSLELGEQV-FGKAITLGLESDQIIST 466
>ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G + G+ + M+K EV N+ LMG +T Y + L LF EM GV
Sbjct: 474 LVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPS 533
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRALHRAKN*G--NYSCIIDLRAWAGFLKDTK 609
I+ + L SG + LF+ + + N G ++SC++DL A AG+ ++
Sbjct: 534 AITFTGV--LSACDHSGLVEEGRNLFHTMKHSYNI-NPGIEHFSCMVDLFARAGYFEEAM 590
Query: 610 NLIEQMPFEADVS-----ARGCMARGKKSLG 687
+LIE+MPF+AD + RGC+A G K++G
Sbjct: 591 DLIEEMPFQADANMWLSVLRGCIAHGNKTIG 621
Score = 26.9 bits (58), Expect(2) = 2e-12
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 168 SNCALRLGMQI---IFAHTTVICLESDQIIST 254
S CA R +++ +F I LESDQIIST
Sbjct: 441 SACACRSSLELGEQVFGKAITIGLESDQIIST 472
>ref|XP_007137505.1| hypothetical protein PHAVU_009G132600g [Phaseolus vulgaris]
gi|561010592|gb|ESW09499.1| hypothetical protein
PHAVU_009G132600g [Phaseolus vulgaris]
Length = 699
Score = 68.6 bits (166), Expect(2) = 1e-11
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Frame = +1
Query: 259 LVDLYCRSGDIREGQTISHVMLKF-EVP*NSPLMGNSTEDYRTDDLELFEEMRNAGVSSK 435
LVD YC+ G ++ G+ + M+K EV N+ LMG + + + L LF EMR GV
Sbjct: 495 LVDFYCKCGFVKIGRKVFDGMVKTDEVSWNTMLMGYAANGHGIEALTLFSEMRYCGVKPS 554
Query: 436 DISPSQAFYLMQPQWSGRRWKECILFNETRALHRAK------N*G--NYSCIIDLRAWAG 591
I+ + C L E R L N G +YSC++DL A AG
Sbjct: 555 AITFTGVLSACD---------HCGLVEEGRYLFHTMTHNYNINPGIEHYSCMVDLFARAG 605
Query: 592 FLKDTKNLIEQMPFEADVS-----ARGCMARGKKSLG 687
++ +L+ +MPF+AD + RGC+A G K +G
Sbjct: 606 CFEEAMDLMAEMPFQADANMWLSVLRGCIAHGNKIIG 642
Score = 27.7 bits (60), Expect(2) = 1e-11
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 165 ASNCALRLGMQIIFAHTTVICLESDQIIST 254
AS +L LG Q+ F I L+SDQIIST
Sbjct: 465 ASKSSLELGEQV-FGKAVTIGLDSDQIIST 493