BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00049348
         (270 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06

>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%)
 Frame = -2

Query: 260 GGLLRDKGGSVIFVFHKEVSPISVLYSEAEGLLEGLKITNQMGYCNIDIHVDSLLLYQMV 81
           GG++RDK G +I  F   +   S   +E E  L GL    ++G+ NI + +DS L+ Q +
Sbjct: 317 GGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWI 376

Query: 80  SKKIATPWRLKKQLLEIEALML 15
           S KIA PW L  QL  ++ +++
Sbjct: 377 SNKIAPPWNLTNQLERLQQIII 398


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 213

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%)
 Frame = -2

Query: 260 GGLLRDKGGSVIFVFHKEVSPISVLYSEAEGLLEGLKITNQMGYCNIDIHVDSLLLYQMV 81
           GG++RDK G +I  F   +   S   +E E  L GL    ++G+ NI + +DS L+ Q +
Sbjct: 62  GGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWI 121

Query: 80  SKKIATPWRLKKQLLEIEALML 15
           S KIA PW L  QL  ++ +++
Sbjct: 122 SNKIAPPWNLTNQLERLQQIII 143