BLASTX nr result
ID: Cocculus23_contig00049162
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00049162
(376 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 62 5e-20
gb|AFB73911.1| polyprotein [Citrus sinensis] 60 3e-18
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 59 5e-17
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 59 5e-17
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 59 6e-17
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 59 1e-16
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 56 6e-16
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 60 3e-15
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 43 7e-09
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 43 7e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 43 7e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 43 9e-09
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 44 1e-08
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 44 1e-08
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 43 2e-08
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 42 2e-08
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 42 2e-08
emb|CAN66075.1| hypothetical protein VITISV_026161 [Vitis vinifera] 56 3e-08
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 42 7e-08
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 44 7e-08
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 62.0 bits (149), Expect(2) = 5e-20
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQE 160
T HM +RREW YEP SG SV + D+ALE+AGI TIK+ M+DG I+E
Sbjct: 299 TWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEE 350
Score = 61.2 bits (147), Expect(2) = 5e-20
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH GLK +LLSL Q+D GCKT V++GIMK VKGALV+ I ANL+ML G
Sbjct: 351 VRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKICANLFMLKG 405
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQE 160
T HM +RREW YEP SG SV + D+ALE+AGI TIK+ M+DG I E
Sbjct: 299 TWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIGE 350
Score = 57.0 bits (136), Expect(2) = 3e-18
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH GLK +LLSL Q+D G KT V++GIMK VKGALV+ I ANL+ML G
Sbjct: 351 VRHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIVKGALVLMKVEKIGANLFMLKG 405
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 59.3 bits (142), Expect(2) = 5e-17
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH KGLK +LLS+ QLD+LGCK + GI+K VKG LVV I +NLYML G
Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLG 404
Score = 53.9 bits (128), Expect(2) = 5e-17
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQ 157
T HM R+W +YEP S SV + D+ALE+AG+ TI+L M+DG IQ
Sbjct: 298 TWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 59.3 bits (142), Expect(2) = 5e-17
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH KGLK +LLS+ QLD+LGCK + GI+K VKG LVV I +NLYML G
Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLG 404
Score = 53.9 bits (128), Expect(2) = 5e-17
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQ 157
T HM R+W +YEP S SV + D+ALE+AG+ TI+L M+DG IQ
Sbjct: 298 TWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 59.3 bits (142), Expect(2) = 6e-17
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH KGLK +LLS+ QLD+LGCK + GI+K VKG LVV I +NLYML G
Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLG 404
Score = 53.5 bits (127), Expect(2) = 6e-17
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQ 157
T HM R+W +YEP S SV + D+ALE+AG+ TI+L M+DG IQ
Sbjct: 298 TWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 58.5 bits (140), Expect(2) = 1e-16
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH KGLK +LLS+ QLD+LGCK + GI+K VKG LVV I +NLYML G
Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYMLLG 404
Score = 53.5 bits (127), Expect(2) = 1e-16
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQ 157
T HM R+W +YEP S SV + D+ALE+AG+ TI+L M+DG IQ
Sbjct: 298 TWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 56.2 bits (134), Expect(2) = 6e-16
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQE 160
T HM RR+W YEP S +V + D+ALE+ GI T+K+ MYDG +QE
Sbjct: 298 TWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQE 349
Score = 53.1 bits (126), Expect(2) = 6e-16
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH K L +LLS+ QLD+LG K ++ GI+K VKG+LVV +AANLYML G
Sbjct: 350 VRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYMLLG 404
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 59.7 bits (143), Expect(2) = 3e-15
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDGVDHIIQE 160
T HM +R+EW +YEP SG SV D+ALE+ GI TIKL MYDG +Q+
Sbjct: 289 TYHMTSRKEWFHHYEPISGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQD 340
Score = 47.4 bits (111), Expect(2) = 3e-15
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLNG 309
VRH KGLK +LLS LD + + G+MK +GALVV IAANLYML G
Sbjct: 341 VRHVKGLKKNLLSYGILDNSATQIETQKGVMKIFQGALVVMKGEKIAANLYMLKG 395
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 43.1 bits (100), Expect(2) = 7e-09
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L G
Sbjct: 394 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG 448
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 342 TYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDG 386
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 43.1 bits (100), Expect(2) = 7e-09
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L G
Sbjct: 394 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG 448
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 342 TYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDG 386
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 43.1 bits (100), Expect(2) = 7e-09
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L G
Sbjct: 359 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQG 413
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 307 TYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 351
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 42.7 bits (99), Expect(2) = 9e-09
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 216 TYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 260
Score = 42.4 bits (98), Expect(2) = 9e-09
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVIA-----ANLYMLNG 309
VRH LK L+SL LD G K DGI+K KG+LVV+ ANLY L G
Sbjct: 268 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRG 322
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 139 CGSHYPRVRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYML 303
C S VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L
Sbjct: 184 CISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 243
Query: 304 NG 309
G
Sbjct: 244 RG 245
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI +++ M+DG
Sbjct: 139 TYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDG 183
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 139 CGSHYPRVRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYML 303
C S VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L
Sbjct: 184 CISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 243
Query: 304 NG 309
G
Sbjct: 244 RG 245
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI +++ M+DG
Sbjct: 139 TYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDG 183
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 273 TYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 317
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+S LD G K DGI+K KG+LVV+ +ANLY L G
Sbjct: 325 VRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG 379
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 292 TYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 336
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L G
Sbjct: 344 VRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQG 398
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AGI T+++ M+DG
Sbjct: 124 TYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 168
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+SL LD G K DGI+K KG+LVV+ +ANLY L G
Sbjct: 176 VRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQG 230
>emb|CAN66075.1| hypothetical protein VITISV_026161 [Vitis vinifera]
Length = 277
Score = 56.2 bits (134), Expect(2) = 3e-08
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
Frame = +1
Query: 154 PRVRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVV-----IAANLYMLN 306
P+VRH KGLK ++LS+ QLD+L + VK GIMK ++G VV IAANLYML+
Sbjct: 28 PKVRHVKGLKKNMLSMGQLDDLRYEFHVKRGIMKVIRGTFVVMKVEKIAANLYMLH 83
Score = 26.9 bits (58), Expect(2) = 3e-08
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 83 DYALELAGIDTIKLMMYDGV 142
D+ALE+ GI +IK M DGV
Sbjct: 4 DHALEIVGIGSIKAKMDDGV 23
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 42.4 bits (98), Expect(2) = 7e-08
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YEP G +V + + ++AG+ TI++ M+DG
Sbjct: 249 TYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDG 293
Score = 39.7 bits (91), Expect(2) = 7e-08
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVIA-----ANLYMLNG 309
VRH LK +L+SL LD G + DGI+K KG+LVV+ A+LY L G
Sbjct: 301 VRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQG 355
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 43.5 bits (101), Expect(2) = 7e-08
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 5 TRHMITRREWLLNYEPTSGRSVQLAYDYALELAGIDTIKLMMYDG 139
T HM R+W YE G +V + D E+AG++T+++ M+DG
Sbjct: 307 TYHMCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDG 351
Score = 38.5 bits (88), Expect(2) = 7e-08
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 160 VRHEKGLKTDLLSL*QLDELGCKTLVKDGIMKTVKGALVVI-----AANLYMLNG 309
VRH LK L+SL LD K DGI+K KG+LVV+ +ANLY + G
Sbjct: 359 VRHIPNLKRSLISLCTLDRKVYKYSGGDGILKVTKGSLVVMKADIKSANLYHVRG 413