BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00048413
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHM26643.1| a-b binding protein [Pyrus x bretschneideri]            82   8e-14
dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...    80   3e-13
gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-bind...    80   3e-13
gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-bind...    80   3e-13
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...    78   1e-12
pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-har...    78   1e-12
ref|XP_002316737.1| Chlorophyll a-b binding protein 2 [Populus t...    78   1e-12
gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-bind...    78   1e-12
gb|EYU19613.1| hypothetical protein MIMGU_mgv1a011885mg [Mimulus...    78   1e-12
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...    78   1e-12
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...    78   1e-12
sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding pro...    78   1e-12
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...    78   1e-12
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1...    78   1e-12
ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1...    78   1e-12
ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 5...    78   1e-12
ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 4...    78   1e-12
ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 4...    78   1e-12
ref|XP_007211869.1| hypothetical protein PRUPE_ppa010099mg [Prun...    78   1e-12
ref|XP_007211864.1| hypothetical protein PRUPE_ppa010081mg [Prun...    78   1e-12

>gb|AHM26643.1| a-b binding protein [Pyrus x bretschneideri]
          Length = 264

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPVANNAWNYATNF PGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFVPGK 264


>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPVANNAW+YATNF PGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 266


>gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus]
          Length = 116

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPVANNAW+YATNF PGK
Sbjct: 79  FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116


>gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus] gi|159138423|gb|ABW89214.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138425|gb|ABW89215.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138429|gb|ABW89217.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138433|gb|ABW89219.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138437|gb|ABW89221.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138439|gb|ABW89222.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138441|gb|ABW89223.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138443|gb|ABW89224.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138445|gb|ABW89225.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138447|gb|ABW89226.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138451|gb|ABW89228.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138453|gb|ABW89229.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138455|gb|ABW89230.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138457|gb|ABW89231.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus]
          Length = 116

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPVANNAW+YATNF PGK
Sbjct: 79  FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAWN+ATNF PGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267


>pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168890|pdb|1RWT|C Chain C, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168891|pdb|1RWT|D Chain D,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168893|pdb|1RWT|F Chain F, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168894|pdb|1RWT|G Chain G,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168896|pdb|1RWT|I Chain I, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168897|pdb|1RWT|J Chain J,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
          Length = 232

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAWN+ATNF PGK
Sbjct: 195 FVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 232


>ref|XP_002316737.1| Chlorophyll a-b binding protein 2 [Populus trichocarpa]
           gi|222859802|gb|EEE97349.1| Chlorophyll a-b binding
           protein 2 [Populus trichocarpa]
          Length = 264

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/38 (94%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW YATNFAPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFAPGK 264


>gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus] gi|159138431|gb|ABW89218.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138435|gb|ABW89220.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus]
          Length = 116

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPG 202
           FVQAIVTGKGPLENLADHLADPVANNAW+YATNF PG
Sbjct: 79  FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPG 115


>gb|EYU19613.1| hypothetical protein MIMGU_mgv1a011885mg [Mimulus guttatus]
          Length = 267

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
           AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
           Precursor gi|20479|emb|CAA26213.1| unnamed protein
           product [Petunia sp.]
          Length = 267

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 232 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269


>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 50, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 263

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 263


>ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 263

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 263


>ref|XP_007211869.1| hypothetical protein PRUPE_ppa010099mg [Prunus persica]
           gi|462407734|gb|EMJ13068.1| hypothetical protein
           PRUPE_ppa010099mg [Prunus persica]
          Length = 264

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 264


>ref|XP_007211864.1| hypothetical protein PRUPE_ppa010081mg [Prunus persica]
           gi|462407729|gb|EMJ13063.1| hypothetical protein
           PRUPE_ppa010081mg [Prunus persica]
          Length = 265

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -2

Query: 312 FVQAIVTGKGPLENLADHLADPVANNAWNYATNFAPGK 199
           FVQAIVTGKGPLENLADHLADPV NNAW+YATNF PGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265