BLASTX nr result

ID: Cocculus23_contig00048364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00048364
         (821 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304...    59   3e-06
ref|XP_004301926.1| PREDICTED: uncharacterized protein LOC101300...    58   4e-06

>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
           subsp. vesca]
          Length = 1687

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 25/60 (41%), Positives = 39/60 (65%)
 Frame = -3

Query: 192 LSWNVRGIKNTRAFKELWTVVQAQIPEIVFLIETRLSASQAISFCTKLGYSSCTVVGKEG 13
           +SWNVRG+ N   F+ L   ++A+ P++VFL+ET+    +  + C  LG+  C+VVGK G
Sbjct: 4   VSWNVRGLGNPHTFRALKKFLRAKDPDLVFLMETKKKKQEMANICFDLGFEGCSVVGKVG 63


>ref|XP_004301926.1| PREDICTED: uncharacterized protein LOC101300737 [Fragaria vesca
           subsp. vesca]
          Length = 193

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = -3

Query: 192 LSWNVRGIKNTRAFKELWTVVQAQIPEIVFLIETRLSASQAISFCTKLGYSSCTVVGKEG 13
           +SWNVRG+ N   F+ L   ++A+ P +VFL+ET+ S ++    C  LG+  C VVGK G
Sbjct: 4   VSWNVRGLGNPHNFRALKRFLRAKDPYLVFLMETKKSKAEMTDICYDLGFGGCCVVGKVG 63

Query: 12  NA*G 1
            + G
Sbjct: 64  RSSG 67


Top