BLASTX nr result
ID: Cocculus23_contig00048263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00048263
(359 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003094935.1| hypothetical protein CRE_29157 [Caenorhabdit... 64 2e-08
gb|EYC44817.1| hypothetical protein Y032_0448g1634 [Ancylostoma ... 62 6e-08
gb|EYC44816.1| hypothetical protein Y032_0448g1634 [Ancylostoma ... 62 6e-08
ref|XP_004488407.1| PREDICTED: uncharacterized protein LOC101502... 62 8e-08
gb|EYC40354.1| hypothetical protein Y032_0618g710 [Ancylostoma c... 61 2e-07
gb|EYC40353.1| hypothetical protein Y032_0618g710 [Ancylostoma c... 61 2e-07
gb|EXC28861.1| Retrovirus-related Pol polyprotein from transposo... 61 2e-07
gb|EYC04230.1| hypothetical protein Y032_0089g2297 [Ancylostoma ... 60 2e-07
emb|CDJ82085.1| RNA-directed DNA polymerase (reverse transcripta... 60 2e-07
gb|EPY52228.1| hypothetical protein SPOG_05677 [Schizosaccharomy... 60 2e-07
ref|XP_007541551.1| PREDICTED: tesmin [Poecilia formosa] 60 4e-07
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun... 59 5e-07
gb|ADB85258.1| putative retrotransposon protein [Phyllostachys e... 59 5e-07
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 59 9e-07
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
ref|XP_002340550.1| gag/polymerase/env polyprotein, putative [Ta... 58 1e-06
ref|XP_002431503.1| enzymatic polyprotein; Endonuclease; Reverse... 58 1e-06
ref|YP_008169843.1| gag-pol polyprotein [Koala retrovirus] gi|51... 58 2e-06
dbj|BAM67146.1| gag-pol precursor polyprotein [Koala retrovirus] 58 2e-06
sp|Q9TTC1.1|POL_KORV RecName: Full=Pro-Pol polyprotein; AltName:... 58 2e-06
>ref|XP_003094935.1| hypothetical protein CRE_29157 [Caenorhabditis remanei]
gi|308246388|gb|EFO90340.1| hypothetical protein
CRE_29157 [Caenorhabditis remanei]
Length = 2338
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PTS +SF+G ASY RRF+ ++++APL +L KK D+ W E HQ + K+K LVN
Sbjct: 1624 PTSPTAIRSFIGMASYFRRFIQNFSAIAAPLYDLTKKDVDFIWTEQHQDAFGKLKNALVN 1683
Query: 165 A 163
A
Sbjct: 1684 A 1684
>gb|EYC44817.1| hypothetical protein Y032_0448g1634 [Ancylostoma ceylanicum]
Length = 173
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT V E ++FLG Y R+ + G + ++ PL EL K KA +KWEE + + AK+KE L +
Sbjct: 88 PTCVAEMRAFLGLCGYYRKLVFGFSKIAQPLFELTKAKAPWKWEETQENAFAKLKECLKS 147
Query: 165 ALSFSQ 148
A SQ
Sbjct: 148 APVLSQ 153
>gb|EYC44816.1| hypothetical protein Y032_0448g1634 [Ancylostoma ceylanicum]
Length = 171
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT V E ++FLG Y R+ + G + ++ PL EL K KA +KWEE + + AK+KE L +
Sbjct: 86 PTCVAEMRAFLGLCGYYRKLVFGFSKIAQPLFELTKAKAPWKWEETQENAFAKLKECLKS 145
Query: 165 ALSFSQ 148
A SQ
Sbjct: 146 APVLSQ 151
>ref|XP_004488407.1| PREDICTED: uncharacterized protein LOC101502180 [Cicer arietinum]
Length = 1235
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT+VKE +SFLG A Y RRF+ + +++ L L KK +++W + ++S K+KE L +
Sbjct: 983 PTTVKEIRSFLGLAGYYRRFVKDFSKVASSLTRLTPKKVEFRWTDACEESFQKLKEYLTH 1042
Query: 165 ALSFSQHNSFLNGVIFS 115
+++ H+ + VIF+
Sbjct: 1043 EVNYPTHDLEMAAVIFA 1059
>gb|EYC40354.1| hypothetical protein Y032_0618g710 [Ancylostoma ceylanicum]
Length = 2133
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = -3
Query: 357 DHIEPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKE 178
D+ P +V E ++FLG ASY R+F+L A ++ L EL KA++KW E H+Q+ A++K+
Sbjct: 1040 DYPTPKNVGELRTFLGMASYYRKFILRFAKIAKCLYELTSTKAEWKWTEDHEQAFAELKK 1099
Query: 177 TLVNALSFSQHN 142
+ A Q N
Sbjct: 1100 AMSTAPVLGQPN 1111
>gb|EYC40353.1| hypothetical protein Y032_0618g710 [Ancylostoma ceylanicum]
Length = 1836
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = -3
Query: 357 DHIEPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKE 178
D+ P +V E ++FLG ASY R+F+L A ++ L EL KA++KW E H+Q+ A++K+
Sbjct: 743 DYPTPKNVGELRTFLGMASYYRKFILRFAKIAKCLYELTSTKAEWKWTEDHEQAFAELKK 802
Query: 177 TLVNALSFSQHN 142
+ A Q N
Sbjct: 803 AMSTAPVLGQPN 814
>gb|EXC28861.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Morus
notabilis]
Length = 836
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -3
Query: 342 TSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
T++KE KSFLGK SY+RRF+ GLA+ A L+KK A +KW HQ+ KI+ ++ N
Sbjct: 557 TTIKELKSFLGKLSYIRRFISGLAAQVAIFKPLLKKDAAFKWTGEHQRGFKKIQHSITN 615
>gb|EYC04230.1| hypothetical protein Y032_0089g2297 [Ancylostoma ceylanicum]
Length = 253
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = -3
Query: 339 SVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN-- 166
+ KE KSFLG A + RRF+ G AS++APL EL K + ++W Q++ +KE LV+
Sbjct: 128 TTKEVKSFLGMADFFRRFIQGFASIAAPLYELCKFRMVFQWGPTQQEAFTALKEALVSRP 187
Query: 165 ALSFSQHNSFL 133
L+F Q+ FL
Sbjct: 188 CLAFPQNQEFL 198
>emb|CDJ82085.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 641
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/69 (36%), Positives = 43/69 (62%)
Frame = -3
Query: 348 EPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLV 169
+PT++ E ++FLG SY R+F+L + ++ PL EL + K + W+ H ++ +K+KE L
Sbjct: 259 KPTNIAELRTFLGMCSYYRKFVLNFSKIAGPLFELTRTKIPWNWDTPHDEAFSKLKEVLS 318
Query: 168 NALSFSQHN 142
N +Q N
Sbjct: 319 NTPVLAQPN 327
>gb|EPY52228.1| hypothetical protein SPOG_05677 [Schizosaccharomyces cryophilus
OY26]
Length = 1053
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -3
Query: 348 EPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLV 169
+P +++ +SFLG +Y RRF+ L+ L+ PL +L KK +KW + HQQ+ ++K+TL
Sbjct: 364 QPNTLRRLRSFLGFVNYSRRFMPNLSRLARPLYDLTKKNVKFKWTDRHQQAFIQVKQTLE 423
Query: 168 NALSFSQH 145
N S +
Sbjct: 424 NVSILSHY 431
>ref|XP_007541551.1| PREDICTED: tesmin [Poecilia formosa]
Length = 819
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT+ K+ ++FLG +Y RRF+ G A L+APL L+KKKA+++W E Q++ ++K+ L
Sbjct: 478 PTNTKQLQAFLGLCNYYRRFVSGFAELAAPLNGLLKKKAEFQWGEAQQKAFLQLKQGLTV 537
Query: 165 A 163
A
Sbjct: 538 A 538
>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
gi|462395665|gb|EMJ01464.1| hypothetical protein
PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = -3
Query: 351 IEPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETL 172
++ TSV E +SFLG A Y RRF+ G +S++APL L +K ++W E +QS ++K+ L
Sbjct: 785 VQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEECEQSFQELKKRL 844
Query: 171 VNALSFSQHNSFLNGVIFS 115
A + ++ N VI+S
Sbjct: 845 TTAPVLALPDNAGNFVIYS 863
>gb|ADB85258.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1711
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = -3
Query: 348 EPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLV 169
+PTSV E +SFLG A Y RRF+ G + LS P+ L+KK+ Y+W E ++S ++K+ L
Sbjct: 1044 QPTSVTEVRSFLGLAGYYRRFIEGFSKLSKPMTHLLKKEKKYEWTEACEKSFQELKKKLT 1103
Query: 168 NA 163
A
Sbjct: 1104 YA 1105
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = -3
Query: 348 EPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLV 169
+P SV E +SFLG A Y RRF+ G + ++ P+ +L+KK+ ++W E ++SL ++K+ LV
Sbjct: 347 QPKSVTEVRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEKKFEWTEACEKSLQELKKRLV 406
Query: 168 NA 163
+A
Sbjct: 407 SA 408
>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
P SV E +SFLG A Y RRF+ G + ++ P+ +L+KKK + W E Q+S ++KE L +
Sbjct: 1129 PKSVTEIRSFLGLAGYYRRFIEGFSKIARPMTQLLKKKKKFVWSEQCQESFEQLKEKLTS 1188
Query: 165 A 163
A
Sbjct: 1189 A 1189
>ref|XP_002340550.1| gag/polymerase/env polyprotein, putative [Talaromyces stipitatus
ATCC 10500] gi|218723746|gb|EED23163.1|
gag/polymerase/env polyprotein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 804
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/72 (34%), Positives = 45/72 (62%)
Frame = -3
Query: 357 DHIEPTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKE 178
D +P ++KE +SF+G +Y RR++ A + P+ +L+KK+ Y+W E Q++ + K+
Sbjct: 433 DWPQPRNLKELQSFIGLINYYRRYIENYAKIMTPMFKLLKKEIPYEWNEEQQKAFEEAKK 492
Query: 177 TLVNALSFSQHN 142
L AL +QH+
Sbjct: 493 RLTTALILAQHD 504
>ref|XP_002431503.1| enzymatic polyprotein; Endonuclease; Reverse transcriptase,
putative [Pediculus humanus corporis]
gi|212516797|gb|EEB18765.1| enzymatic polyprotein;
Endonuclease; Reverse transcriptase, putative [Pediculus
humanus corporis]
Length = 805
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
P S K+ KSFLG Y RRF+ G A ++ PL L+KK D+KW Q++ K KE +++
Sbjct: 240 PKSTKDIKSFLGLVGYYRRFIKGFAKIAKPLTILLKKNQDFKWTNKEQEAFEKFKE-ILS 298
Query: 165 ALSFSQHNSFLNGVIFSYSMSN 100
Q+ F + + + SN
Sbjct: 299 TQPILQYPDFNSEFVLTTDASN 320
>ref|YP_008169843.1| gag-pol polyprotein [Koala retrovirus] gi|516464657|gb|AGO86849.1|
gag-pol polyprotein [Koala retrovirus]
Length = 1687
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT+ ++ + FLG A + R ++ G ASL+APL L ++K + W E HQ++ +IKE L++
Sbjct: 933 PTTPRQVREFLGTAGFCRLWIPGFASLAAPLYPLTREKVPFTWTEAHQEAFGRIKEALLS 992
Query: 165 A 163
A
Sbjct: 993 A 993
>dbj|BAM67146.1| gag-pol precursor polyprotein [Koala retrovirus]
Length = 1687
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT+ ++ + FLG A + R ++ G ASL+APL L ++K + W E HQ++ +IKE L++
Sbjct: 933 PTTPRQVREFLGTAGFCRLWIPGFASLAAPLYPLTREKVPFTWTEAHQEAFGRIKEALLS 992
Query: 165 A 163
A
Sbjct: 993 A 993
>sp|Q9TTC1.1|POL_KORV RecName: Full=Pro-Pol polyprotein; AltName: Full=Pr125Pol;
Contains: RecName: Full=Protease/Reverse
transcriptase/ribonuclease H; AltName:
Full=p87Pro-RT-RNaseH; Contains: RecName:
Full=Integrase; Short=IN; AltName: Full=p42In
gi|6524624|gb|AAF15098.1| pol protein [Phascolarctos
cinereus]
Length = 1127
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 345 PTSVKEWKSFLGKASYLRRFLLGLASLSAPLMELVKKKADYKWEEFHQQSLAKIKETLVN 166
PT+ ++ + FLG A + R ++ G ASL+APL L ++K + W E HQ++ +IKE L++
Sbjct: 373 PTTPRQVREFLGTAGFCRLWIPGFASLAAPLYPLTREKVPFTWTEAHQEAFGRIKEALLS 432
Query: 165 A 163
A
Sbjct: 433 A 433