BLASTX nr result
ID: Cocculus23_contig00048189
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00048189
(363 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera] 70 3e-10
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera] 67 3e-09
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 67 3e-09
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 65 1e-08
gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Ja... 64 2e-08
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot... 53 3e-08
gb|AAS49090.1| At2g06190 [Arabidopsis thaliana] 53 3e-08
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 64 3e-08
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 63 4e-08
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 63 4e-08
emb|CAN69890.1| hypothetical protein VITISV_005077 [Vitis vinifera] 63 5e-08
emb|CAN78587.1| hypothetical protein VITISV_043910 [Vitis vinifera] 55 8e-08
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 62 8e-08
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 62 8e-08
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 62 8e-08
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 62 8e-08
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 62 8e-08
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 62 8e-08
emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera] 51 1e-07
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part... 62 1e-07
>emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]
Length = 551
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW DLS DF + +G + F K +F +V+H+AKLFFKE+V L
Sbjct: 418 PWQDLSTDFVLGLPKTFKGHDSIFVVVDRFSK-MVHFIPCSKTLDVVHVAKLFFKEIVRL 476
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWNM 281
GL KTI+S DAKFMSYFWR+ W M
Sbjct: 477 HGLPKTIVSDQDAKFMSYFWRSLWKM 502
>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
Length = 665
Score = 67.0 bits (162), Expect = 3e-09
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = +3
Query: 36 PW*DLSMDF-----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVC 200
PW +LS+DF + R +++++ F K +F + +H+AKLFFKE+V
Sbjct: 421 PWQELSIDFVLGLPKTFRRHDSIFVMV-DRFSK-MVHFIPCSKTLDAVHVAKLFFKEIVR 478
Query: 201 LPGLSKTIISGGDAKFMSYFWRTFWNM 281
L GL KTI+S DAKFMSYFWR+ W M
Sbjct: 479 LHGLPKTIVSDQDAKFMSYFWRSLWKM 505
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW D+SMDF R RG+ + F K +F + HI+KLFFKEVV L
Sbjct: 1310 PWVDISMDFVLGLPRTQRGVDSIFVVVDRFSK-MAHFIPCHKVDDAFHISKLFFKEVVRL 1368
Query: 204 PGLSKTIISGGDAKFMSYFWRTFW 275
GL +TI+S DAKF+S+FW+T W
Sbjct: 1369 HGLPRTIVSDRDAKFLSHFWKTLW 1392
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +3
Query: 30 NLPW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVV 197
N PW D+SMDF R RG + F K +F + H+A LFF+EVV
Sbjct: 863 NAPWEDISMDFVLGLPRTRRGRDSIFVAVDRFSK-MAHFIPCNKSDDASHVADLFFREVV 921
Query: 198 CLPGLSKTIISGGDAKFMSYFWRTFW 275
L G+ +TI+S D KFMSYFW+T W
Sbjct: 922 RLHGVPRTIVSDRDVKFMSYFWKTLW 947
>gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Japonica Group]
Length = 540
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +3
Query: 30 NLPW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVV 197
++PW D+SMDF R RG + F K +F + +HIA +FF ++V
Sbjct: 184 SIPWADISMDFVLGLPRTKRGRDSIFVVVDRFSK-MAHFIPCHKSDDAVHIADMFFHKIV 242
Query: 198 CLPGLSKTIISGGDAKFMSYFWRTFWN 278
L G+ TI+S DAKF+S+FWRT WN
Sbjct: 243 RLHGMPSTIVSDSDAKFLSHFWRTLWN 269
>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
thaliana]
Length = 280
Score = 52.8 bits (125), Expect(2) = 3e-08
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 165 HIAKLFFKEVVCLPGLSKTIISGGDAKFMSYFWRTFWNM 281
+IAKLFFKEVV L G+ K+I S D KF+S+FW T W M
Sbjct: 41 NIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFWSTLWRM 79
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 56 GLPKTIKRHNSIYLVVDSFSKMT 124
GLP+T + +S+++VVD FSKMT
Sbjct: 6 GLPRTQRGVDSVFVVVDRFSKMT 28
>gb|AAS49090.1| At2g06190 [Arabidopsis thaliana]
Length = 148
Score = 52.8 bits (125), Expect(2) = 3e-08
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 165 HIAKLFFKEVVCLPGLSKTIISGGDAKFMSYFWRTFWNM 281
+IAKLFFKEVV L G+ K+I S D KF+S+FW T W M
Sbjct: 41 NIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFWSTLWRM 79
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 56 GLPKTIKRHNSIYLVVDSFSKMT 124
GLP+T + +S+++VVD FSKMT
Sbjct: 6 GLPRTQRGVDSVFVVVDRFSKMT 28
>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
Length = 1323
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW DLSMDF R RG + F K +F SN ++ LFFKEVV L
Sbjct: 937 PWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSK-MTHFIPCKKTSNASYVTALFFKEVVQL 995
Query: 204 PGLSKTIISGGDAKFMSYFWRTFW 275
GL ++I+S D KFMSYFW+T W
Sbjct: 996 HGLPQSIVSNRDVKFMSYFWKTLW 1019
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW D+SMDF R G + F K +F + IHIA LFF+EVV L
Sbjct: 1454 PWNDISMDFVVGLPRTRTGKDSIFVVVDRFSK-MAHFIPCHKTDDAIHIANLFFREVVRL 1512
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWN 278
G+ KTI+S D KF+SYFW+T W+
Sbjct: 1513 HGMPKTIVSDRDTKFLSYFWKTLWS 1537
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Frame = +3
Query: 30 NLPW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVV 197
N PW D+SMDF R RG ++ F K +F + +A+L+FKEVV
Sbjct: 1147 NQPWEDISMDFIVALPRTQRGKDSIMVVVDRFSK-MAHFIACKKTEDATSVAELYFKEVV 1205
Query: 198 CLPGLSKTIISGGDAKFMSYFWRTFWNMPK 287
L G+ K+I+S D+KFMS+FWRT W + K
Sbjct: 1206 KLHGIPKSIVSDRDSKFMSHFWRTLWKLLK 1235
>emb|CAN69890.1| hypothetical protein VITISV_005077 [Vitis vinifera]
Length = 552
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/86 (45%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +3
Query: 36 PW*DLSMDFQ----RLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW DLSMD + RG F K +F NV+H+AKLFFKE+V L
Sbjct: 413 PWQDLSMDCXFGSPKTFRGHDSIFXMVDHFSK-TVHFIPCSKTLNVVHVAKLFFKEIVRL 471
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWNM 281
GL KTI+S DA MSYFWR+ M
Sbjct: 472 QGLPKTIVSNQDANIMSYFWRSLRKM 497
>emb|CAN78587.1| hypothetical protein VITISV_043910 [Vitis vinifera]
Length = 565
Score = 55.5 bits (132), Expect(2) = 8e-08
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +3
Query: 156 NVIHIAKLFFKEVVCLPGLSKTIISGGDAKFMSYFWRTFW 275
NV H+ LFF+E++ L G+ +TI+S DAK +SYFW+T W
Sbjct: 511 NVSHVVDLFFREIIRLHGMPRTIVSNRDAKLLSYFWKTLW 550
Score = 26.6 bits (57), Expect(2) = 8e-08
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 56 GLPKTIKRHNSIYLVVDSFSKMT 124
GLP++ +SI++VVD FS MT
Sbjct: 479 GLPRSKCGRDSIFVVVDRFSMMT 501
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW D+SMDF R G + F K +F + +HIA LFF+EVV L
Sbjct: 829 PWNDISMDFVVGLPRTRTGKDSIFVVVDRFSK-MAHFIPCHKTDDAMHIANLFFREVVRL 887
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWN 278
G+ KTI+S D KF+SYFW+T W+
Sbjct: 888 HGMPKTIVSDRDTKFLSYFWKTLWS 912
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW DLSMDF + RG + F K +F ++ ++AKLFFKEVV L
Sbjct: 1056 PWKDLSMDFVLGLPKTSRGYDSIFVIVDRFSK-MAHFLPCAKNTDASYVAKLFFKEVVRL 1114
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWNM 281
GL +I+S D KF+SYFW+T W +
Sbjct: 1115 HGLPVSIVSDRDVKFVSYFWKTLWKL 1140
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW DLSMDF R RG ++ F K +F + + +A+LF KE+V L
Sbjct: 1161 PWEDLSMDFIVALPRTQRGKDSVMVVVDRFSK-MAHFVACKKTEDAVSVAELFLKEIVRL 1219
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWNMPK 287
G+ KTI+S D KFM YFW+T W + K
Sbjct: 1220 HGVPKTIVSDRDTKFMGYFWKTLWKLLK 1247
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW D+SMDF R RG + F K +F + HIA LFF E+V L
Sbjct: 1266 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSK-MAHFIPCHKSDDASHIASLFFSEIVRL 1324
Query: 204 PGLSKTIISGGDAKFMSYFWRTFW 275
G+ KTI+S D KF+SYFW+T W
Sbjct: 1325 HGMPKTIVSDRDTKFLSYFWKTLW 1348
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW D+SMDF R RG + F K +F + HIA LFF E+V L
Sbjct: 234 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSK-MAHFIPCHKSDDASHIASLFFSEIVRL 292
Query: 204 PGLSKTIISGGDAKFMSYFWRTFW 275
G+ KTI+S D KF+SYFW+T W
Sbjct: 293 HGMPKTIVSDRDTKFLSYFWKTLW 316
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW D+SMDF R RG + F K +F + HIA LFF E+V L
Sbjct: 234 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSK-MAHFIPCHKSDDASHIASLFFSEIVRL 292
Query: 204 PGLSKTIISGGDAKFMSYFWRTFW 275
G+ KTI+S D KF+SYFW+T W
Sbjct: 293 HGMPKTIVSDRDTKFLSYFWKTLW 316
>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
Length = 364
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +3
Query: 153 SNVIHIAKLFFKEVVCLPGLSKTIISGGDAKFMSYFWRTFW 275
++ HIA LFF+E+V L G+ K+I+S D KF+ YFW+ W
Sbjct: 275 NDATHIANLFFREIVWLYGVPKSIVSDRDVKFLRYFWKVLW 315
Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 56 GLPKTIKRHNSIYLVVDSFSKMTMLFLLQRPQIKCH 163
GLP++ +SI++VVD FSKMT I CH
Sbjct: 244 GLPRSRNGRDSIFVVVDRFSKMTHF-------ISCH 272
>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
gi|462418685|gb|EMJ22948.1| hypothetical protein
PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +3
Query: 36 PW*DLSMDF----QRLLRGITLYILW*ILFPK*QCYFFFKGLKSNVIHIAKLFFKEVVCL 203
PW DLSMDF + RG ++ F K +F ++ ++AKLFFKEV+ L
Sbjct: 340 PWKDLSMDFVLGLPKTARGHDSILVVVDRFSK-MAHFLPCSKAADASYVAKLFFKEVIHL 398
Query: 204 PGLSKTIISGGDAKFMSYFWRTFWNM 281
GL +I+S D KF+SYFW+T W +
Sbjct: 399 HGLPVSIVSDRDVKFVSYFWKTLWKL 424