BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00048139
         (276 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    64   3e-08
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...    63   5e-08
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun...    62   8e-08
ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prun...    62   8e-08
ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prun...    62   8e-08
ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun...    62   8e-08
ref|XP_007225095.1| hypothetical protein PRUPE_ppa016563mg, part...    62   1e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   2e-07
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    60   2e-07
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297...    59   5e-07
ref|XP_002466537.1| hypothetical protein SORBIDRAFT_01g009615 [S...    59   7e-07
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              58   1e-06
ref|XP_004292185.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    58   1e-06
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    58   1e-06
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          58   1e-06
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...    58   1e-06
gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]      57   2e-06
ref|XP_007212995.1| hypothetical protein PRUPE_ppa022768mg, part...    57   2e-06
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -3

Query: 238 ELCKAKKEGGMGCRSVEGFNKSHFHRG-WRLVTAPDSLMAQVFKAKYFPRTSFL 80
           +LCK+K +GGMG R ++ FN +   +  WRLV  P SL+A+VFKA+YFP+TSFL
Sbjct: 92  QLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFL 145


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 1152

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  +  ++LC +KKEGG+G R +  FNK+   + GWR++  P SL+AQV K KYFP +S
Sbjct: 593 KIHWIAWDKLCSSKKEGGLGFRDMHVFNKALLAKQGWRMLCRPQSLLAQVLKMKYFPTSS 652

Query: 85  FLQTQ 71
            +Q +
Sbjct: 653 LIQAE 657


>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
           gi|462424248|gb|EMJ28511.1| hypothetical protein
           PRUPE_ppa016553mg [Prunus persica]
          Length = 992

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  +  + LC  K+EGG+G R++  FN +   + GWRL+  PDSL+ +V KAKYFP  S
Sbjct: 480 KIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRS 539

Query: 85  FLQT 74
           FL+T
Sbjct: 540 FLET 543


>ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
           gi|462423643|gb|EMJ27906.1| hypothetical protein
           PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  +  + LC  K+EGG+G R++  FN +   + GWRL+  PDSL+ +V KAKYFP  S
Sbjct: 728 KIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLITKVLKAKYFPTRS 787

Query: 85  FLQT 74
           FL+T
Sbjct: 788 FLET 791


>ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
           gi|462413471|gb|EMJ18520.1| hypothetical protein
           PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  ++   LCKAK EGGMG R ++ FN +   + GWRLV  P SL +++ KAKYFP+T+
Sbjct: 773 KIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTN 832

Query: 85  F 83
           F
Sbjct: 833 F 833


>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
            gi|462398983|gb|EMJ04651.1| hypothetical protein
            PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -3

Query: 262  KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
            KI  ++   LCKAK EGGMG R ++ FN +   + GWRLV  P SL +++ KAKYFP+T+
Sbjct: 1253 KIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTN 1312

Query: 85   F 83
            F
Sbjct: 1313 F 1313


>ref|XP_007225095.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
           gi|462422031|gb|EMJ26294.1| hypothetical protein
           PRUPE_ppa016563mg, partial [Prunus persica]
          Length = 925

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  ++   LCKAK EGGMG R ++ FN +   + GWRLV  P SL +++ KAKYFP T+
Sbjct: 404 KIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPHTN 463

Query: 85  F 83
           F
Sbjct: 464 F 464


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = -3

Query: 223  KKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFLQTQ 71
            KKEGG+G R+ + FN++   +  WR++T PDSLMA+V K KYFPR++FL+ +
Sbjct: 857  KKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEAR 908


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = -3

Query: 238 ELCKAKKEGGMGCRSVEGFNKSHFHRG-WRLVTAPDSLMAQVFKAKYFPRTSFL 80
           +LCK+K  GGMG R ++ FN +   +  WRL   P SL+A+VFKA+YFP+TSFL
Sbjct: 92  QLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQTSFL 145


>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
           subsp. vesca]
          Length = 1096

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 238 ELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFLQTQ 71
           +LC  K EGG+G R +  FN +   + GWRL+  P+SL+AQV KA+YFP  SF++ +
Sbjct: 608 KLCTTKAEGGLGFRDMRLFNMALLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAE 664


>ref|XP_002466537.1| hypothetical protein SORBIDRAFT_01g009615 [Sorghum bicolor]
           gi|241920391|gb|EER93535.1| hypothetical protein
           SORBIDRAFT_01g009615 [Sorghum bicolor]
          Length = 229

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  L   ++ K K+EGG+G R +  FN +   +  WRL+  P+SL A+V KAKYFP TS
Sbjct: 66  KIHWLSKEQMLKPKEEGGLGFRDIHSFNLAMLAKQSWRLLQQPNSLCAKVLKAKYFPDTS 125

Query: 85  FLQTQP 68
            L  QP
Sbjct: 126 VLLAQP 131


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -3

Query: 241 NELCKAKKEGGMGCRSVEGFNKSHFHRG-WRLVTAPDSLMAQVFKAKYFPRTS 86
           N+LC +K +GG+G RSV  FN +   +  WRL+T PDSL A+VFK +YF +++
Sbjct: 692 NKLCSSKADGGLGFRSVNDFNSALLAKQLWRLITVPDSLFAKVFKGRYFRKSN 744


>ref|XP_004292185.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 464

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -3

Query: 235 LCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFLQTQ 71
           +C  K EGGMG + +  +N +   + GWR+++ P SL+AQ+FKA+Y+P +SFL+ +
Sbjct: 71  MCLTKAEGGMGFKIIYAYNLAMLAKQGWRILSKPHSLIAQIFKARYYPHSSFLEAE 126


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -3

Query: 241 NELCKAKKEGGMGCRSVEGFNKSHFHRG-WRLVTAPDSLMAQVFKAKYFPRTSFLQT 74
           ++LC +K +GG+G R+V+ FN +   +  WRL+TAPDSL A+VFK +YF +++ L +
Sbjct: 626 DKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDS 682


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -3

Query: 241  NELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFLQTQ 71
            ++LC +KK+GG+G R +  FN++   + GWRL+  PDSL+A++ KAKYFP   F++ +
Sbjct: 1129 SDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAE 1186


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/55 (45%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = -3

Query: 238 ELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFLQ 77
           +LC++K+ GG+G R ++ FN++   + GWRL+T P+SL A + +AKY+PR S L+
Sbjct: 83  KLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATILRAKYYPRKSPLE 137


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  L   +L K K+EGG+G R +  FN +   + GWRL+  P+SL A+V KAKY P  S
Sbjct: 145 KIHWLGKEQLLKPKEEGGLGFRDIHSFNMAMLAKQGWRLLKEPESLCARVLKAKYHPNGS 204

Query: 85  FLQTQP 68
            L  QP
Sbjct: 205 VLDAQP 210


>gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]
          Length = 1455

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -3

Query: 235 LCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFL 80
           LC+ K++ GMG R V  FN++   + GWR+++ P SL+A +FKAKYFP+  FL
Sbjct: 141 LCRPKRDRGMGFRDVGAFNQALLAKQGWRILSKPSSLVAIIFKAKYFPKGEFL 193


>ref|XP_007212995.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
           gi|462408860|gb|EMJ14194.1| hypothetical protein
           PRUPE_ppa022768mg, partial [Prunus persica]
          Length = 887

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = -3

Query: 262 KIL*LQCNELCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTS 86
           KI  +   +LCK K EGGMG R +  FN +   + GWR++T P S+ +++ +AKYFP +S
Sbjct: 416 KIHWISWEKLCKPKDEGGMGFRHLYAFNLAMLAKQGWRILTMPTSMASKLLQAKYFPTSS 475

Query: 85  FL 80
           FL
Sbjct: 476 FL 477


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = -3

Query: 235 LCKAKKEGGMGCRSVEGFNKSHFHR-GWRLVTAPDSLMAQVFKAKYFPRTSFLQTQ 71
           LC+AKK GG+G R +  FN++   +  WR++ AP+SL+A+V K KYF  + F++ Q
Sbjct: 255 LCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQ 310