BLASTX nr result
ID: Cocculus23_contig00047786
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00047786
(428 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006847835.1| hypothetical protein AMTR_s00029p00055730 [A... 75 7e-12
emb|CBI29027.3| unnamed protein product [Vitis vinifera] 75 9e-12
ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera] 75 9e-12
ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006437608.1| hypothetical protein CICLE_v10031339mg [Citr... 70 4e-10
ref|XP_003592711.1| Pentatricopeptide repeat-containing protein ... 67 2e-09
ref|XP_007043264.1| Pentatricopeptide repeat superfamily protein... 67 3e-09
ref|XP_007142776.1| hypothetical protein PHAVU_007G016000g [Phas... 66 4e-09
ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prun... 66 4e-09
ref|XP_007050939.1| Pentatricopeptide repeat (PPR) superfamily p... 65 1e-08
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250... 64 2e-08
emb|CBI36868.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_006646265.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
emb|CBI28140.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006359300.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_002310070.2| hypothetical protein POPTR_0007s07610g [Popu... 64 3e-08
>ref|XP_006847835.1| hypothetical protein AMTR_s00029p00055730 [Amborella trichopoda]
gi|548851140|gb|ERN09416.1| hypothetical protein
AMTR_s00029p00055730 [Amborella trichopoda]
Length = 122
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKK PG SSVEV G IH FIAHD+THP S E+YLML+DL Q+KL D +T + D
Sbjct: 62 RGVKKVPGFSSVEVDGAIHRFIAHDRTHPCSKEVYLMLNDLGRQIKLQDCLET----VLD 117
Query: 181 IEENG 195
+E G
Sbjct: 118 TDEEG 122
>emb|CBI29027.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKKSPG S VEV G +H FIAHDKTH +IY+ML+ + QM +D + +T+E G YD
Sbjct: 322 RGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMVDVDFETQERGFYD 381
Query: 181 IE 186
IE
Sbjct: 382 IE 383
>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKKSPG S VEV G +H FIAHDKTH +IY+ML+ + QM +D + +T+E G YD
Sbjct: 477 RGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMVDVDFETQERGFYD 536
Query: 181 IE 186
IE
Sbjct: 537 IE 538
>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKKSPG S VEV G +H FIAHDKTH +IY+ML+ + QM +D + +T+E G YD
Sbjct: 470 RGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMVDVDFETQERGFYD 529
Query: 181 IE 186
IE
Sbjct: 530 IE 531
>ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Citrus sinensis]
Length = 537
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKK PG S VE+ G +H FIAHD+THP S IY ML+ +A QMKLD + + +E YD
Sbjct: 474 RGVKKYPGWSFVEMSGNLHRFIAHDETHPDSKNIYAMLNFIASQMKLDVDHENQEPCFYD 533
Query: 181 IE 186
++
Sbjct: 534 MK 535
>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKKSPG S VE+ G++H FIAHDKTHP S E Y ML+ + QMKL + +E L D
Sbjct: 479 RGVKKSPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMKLSCHEDNQERSLND 538
>ref|XP_006437608.1| hypothetical protein CICLE_v10031339mg [Citrus clementina]
gi|557539804|gb|ESR50848.1| hypothetical protein
CICLE_v10031339mg [Citrus clementina]
Length = 491
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGV+K PG S VE+ G +H FIAHD+THP S IY ML+ + QMKLD + + +E YD
Sbjct: 428 RGVQKYPGWSFVEMSGNLHRFIAHDETHPDSKNIYAMLNFIVSQMKLDVDHENQEPCFYD 487
Query: 181 IE 186
++
Sbjct: 488 MK 489
>ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 550
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGL 174
RGVKKSPG S VE+ + H FIAHDKTHP S E Y MLH + QMK Q +ED L
Sbjct: 479 RGVKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQMKHGCPQDNQEDNL 536
>ref|XP_007043264.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508707199|gb|EOX99095.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 530
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RG+KKS G S VE+ G +H F+AHD+THP S +IY ML + QMKLD + +E LY+
Sbjct: 467 RGLKKSAGFSCVEMPGALHSFVAHDETHPNSEDIYTMLKFIVSQMKLDVHKDNQEYLLYE 526
Query: 181 IE 186
++
Sbjct: 527 MK 528
>ref|XP_007142776.1| hypothetical protein PHAVU_007G016000g [Phaseolus vulgaris]
gi|561015966|gb|ESW14770.1| hypothetical protein
PHAVU_007G016000g [Phaseolus vulgaris]
Length = 548
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/60 (55%), Positives = 39/60 (65%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKKSPG S VE+ G++H FIAHDKTHP S E ML+ + QMK + EE L D
Sbjct: 479 RGVKKSPGFSFVEISGVLHRFIAHDKTHPDSEETNCMLNFVFRQMKFSWYKDNEEKSLED 538
>ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prunus persica]
gi|462399001|gb|EMJ04669.1| hypothetical protein
PRUPE_ppa024598mg [Prunus persica]
Length = 722
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
R VKK+PGCS +EV G++H F+ D +HPQST IY ML D+ E++K + + L D
Sbjct: 582 RNVKKAPGCSLIEVDGIVHEFVKGDSSHPQSTHIYEMLQDMIERLKKAGYVPEKSEVLLD 641
Query: 181 IEE 189
I+E
Sbjct: 642 IDE 644
>ref|XP_007050939.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|590718992|ref|XP_007050940.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao] gi|508703200|gb|EOX95096.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao] gi|508703201|gb|EOX95097.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 525
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RG+KK PGCS VE+GG++H F D + P+S EIY+ML ++ +++KL+ ++ L D
Sbjct: 429 RGIKKVPGCSLVEMGGVLHEFFVGDDSLPESREIYMMLDEIMKRLKLEGYVGNTKEVLLD 488
Query: 181 IEENG 195
++E G
Sbjct: 489 LDEEG 493
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RG+KK PGC+++EV ++H F+ DK HPQS +IY ML ++ EQ+K+ + LYD
Sbjct: 594 RGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYD 653
Query: 181 IEE 189
++E
Sbjct: 654 MDE 656
>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/64 (39%), Positives = 45/64 (70%)
Frame = +1
Query: 4 GVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDI 183
G+KK PGCS +EVGG++H F D +HP++ +I++ML ++ E++K++ ++ L D+
Sbjct: 433 GIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDL 492
Query: 184 EENG 195
+E G
Sbjct: 493 DEEG 496
>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/64 (39%), Positives = 45/64 (70%)
Frame = +1
Query: 4 GVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYDI 183
G+KK PGCS +EVGG++H F D +HP++ +I++ML ++ E++K++ ++ L D+
Sbjct: 402 GIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDL 461
Query: 184 EENG 195
+E G
Sbjct: 462 DEEG 465
>ref|XP_006646265.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Oryza brachyantha]
Length = 502
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
+GVKK PGCS++EVGG +H F KTHP+ EI +ML ++ ++++L ++ L+D
Sbjct: 362 KGVKKVPGCSAIEVGGKVHEFFVGSKTHPRYREIEIMLAEMTQRLRLHGYIANTKEVLFD 421
Query: 181 IEE 189
IEE
Sbjct: 422 IEE 424
>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
R +KK PGCS++EVGG++H F+ D +HPQS+EIY L D+ ++K + + L+D
Sbjct: 440 RNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFD 499
Query: 181 IEE 189
++E
Sbjct: 500 MDE 502
>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
R +KK PGCS++EVGG++H F+ D +HPQS+EIY L D+ ++K + + L+D
Sbjct: 571 RNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFD 630
Query: 181 IEE 189
++E
Sbjct: 631 MDE 633
>ref|XP_006359300.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Solanum tuberosum]
Length = 559
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKK PG S VE+ G +H FIAHDK HP+S +IY +L + QMKL + + +E L D
Sbjct: 479 RGVKKLPGFSVVEIFGALHRFIAHDKAHPESDQIYTILDFVLWQMKLGRDCEEQEQLLCD 538
Query: 181 I 183
I
Sbjct: 539 I 539
>ref|XP_002310070.2| hypothetical protein POPTR_0007s07610g [Populus trichocarpa]
gi|550334350|gb|EEE90520.2| hypothetical protein
POPTR_0007s07610g [Populus trichocarpa]
Length = 494
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 1 RGVKKSPGCSSVEVGGLIHMFIAHDKTHPQSTEIYLMLHDLAEQMKLDDEQQTEEDGLYD 180
RGVKK+PG S +E+ G H FIAHDK+HP S +IY ML + QM+ ++ +E LY
Sbjct: 431 RGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIVSQMQFGVLKEGQEHCLYG 490
Query: 181 IE 186
IE
Sbjct: 491 IE 492