BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00047673
         (256 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...    91   2e-16
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...    90   3e-16
ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer ar...    90   4e-16
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...    89   6e-16
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar...    87   2e-15
ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer ar...    79   5e-13
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...    79   8e-13
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          78   1e-12
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          78   1e-12
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    78   1e-12
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             76   5e-12
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    76   5e-12
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    76   5e-12
ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus]         75   9e-12
ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Popu...    71   1e-10
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...    69   7e-10
ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer ar...    69   7e-10
ref|XP_006398168.1| hypothetical protein EUTSA_v10001178mg, part...    68   1e-09
ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer ar...    67   3e-09
ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer ar...    66   6e-09

>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 48/87 (55%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTWN 170
            KR+LQTDA D YWGA+LIEE  G + YCGHASG FK +E HYHT +KE        Q ++
Sbjct: 1637 KRILQTDASDHYWGAVLIEEINGVKYYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFD 1696

Query: 171  FEI*FLRQHQFEVQMDNFHL*RSLNIK 251
            F    LR +QFEVQMDN    R L  K
Sbjct: 1697 FH---LRGYQFEVQMDNSSFPRILEFK 1720


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 48/87 (55%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTWN 170
            KR+LQTDA D YWGA+LIEE  G + YCGHASG FK +E HYHT +KE        Q ++
Sbjct: 970  KRILQTDASDHYWGAVLIEEINGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFD 1029

Query: 171  FEI*FLRQHQFEVQMDNFHL*RSLNIK 251
            F    LR +QFEVQMDN    R L  K
Sbjct: 1030 FH---LRGYQFEVQMDNSSFPRILEFK 1053


>ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 313

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTWN 170
           KR+LQTD  D YWGA+LIEE  G + YCGHASG FK +E HYHT +KE        Q ++
Sbjct: 208 KRILQTDVSDHYWGAVLIEEINGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFD 267

Query: 171 FEI*FLRQHQFEVQMDNFHL*RSLNIK 251
           F    LR +QFEVQMDN +  R L  K
Sbjct: 268 FH---LRGYQFEVQMDNSYFPRILEFK 291


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 48/85 (56%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFE 176
           KR+LQTDA D YWGAILIEE +G + YCGHASG FK +E HYHT +KE          F+
Sbjct: 713 KRILQTDAIDHYWGAILIEEIDGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIHKFD 772

Query: 177 I*FLRQHQFEVQMDNFHL*RSLNIK 251
              LR +QFEVQMDN    R L  K
Sbjct: 773 F-HLRGYQFEVQMDNSSFPRILEFK 796


>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 279

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
 Frame = +3

Query: 6   QKRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTW 167
           +KR+LQTDA D YWGA+LIEE  G + YCGHASG FK +E HYHT +KE        Q +
Sbjct: 202 EKRILQTDASDHYWGAVLIEEINGVKYYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKF 261

Query: 168 NFEI*FLRQHQFEVQMDNF 224
           +F    LR +QFEVQM+ F
Sbjct: 262 DFH---LRGYQFEVQMELF 277


>ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 181

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFE 176
           KR+LQTDA D YWG ILIEE +G + YCGHASG FK +E HYHT +KE         NF+
Sbjct: 112 KRILQTDASDHYWGTILIEEIKGIKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQNFD 171

Query: 177 I*FLRQHQFEV 209
              LR +QFEV
Sbjct: 172 F-HLRGYQFEV 181


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFE 176
           KR+LQTDA D+YWGAIL+EE++  +  CG+ SG FK SE HYH+ FKEI         F+
Sbjct: 290 KRILQTDASDEYWGAILLEERDNHRQICGYKSGHFKDSEKHYHSTFKEILAVKRGIEKFQ 349

Query: 177 I*FLRQHQFEVQMDNFHL*RSLNIK 251
           I  L  H F+++MD     R L+ K
Sbjct: 350 I-HLIGHHFQIEMDMSSFPRMLHFK 373


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFE 176
            K++LQTDA DQYW A+L+EE  GK+ +C HASG FK SE +YH I+KEI         FE
Sbjct: 1525 KKILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFE 1584

Query: 177  I*FLRQHQFEVQMDNFHL*RSLNIK 251
               L  H F + MDN    R  + K
Sbjct: 1585 F-HLISHTFLINMDNSSFPRIFDFK 1608


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFE 176
            K++LQTDA DQYW A+L+EE  GK+ +C HASG FK SE +YH I+KEI         FE
Sbjct: 1623 KKILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFE 1682

Query: 177  I*FLRQHQFEVQMDNFHL*RSLNIK 251
               L  H F + MDN    R  + K
Sbjct: 1683 F-HLISHTFLINMDNSSFPRIFDFK 1706


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFE 176
            K++LQTDA DQYW A+L+EE  GK+ +C HASG FK SE +YH I+KEI         FE
Sbjct: 1636 KKILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFE 1695

Query: 177  I*FLRQHQFEVQMDNFHL*RSLNIK 251
               L  H F + MDN    R  + K
Sbjct: 1696 F-HLISHTFLINMDNSSFPRIFDFK 1719


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTWN 170
            K++LQTDA DQYW A+L+EE  GK+  CG ASG FK SE HYH+ FKEI       + +N
Sbjct: 1683 KKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFN 1742

Query: 171  FEI*FLRQHQFEVQMD 218
            F   FL    F V+MD
Sbjct: 1743 F---FLIHTNFLVEMD 1755


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTWN 170
            K++LQTDA DQYW A+L+EE  GK+  CG ASG FK SE HYH+ FKEI       + +N
Sbjct: 1683 KKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFN 1742

Query: 171  FEI*FLRQHQFEVQMD 218
            F   FL    F V+MD
Sbjct: 1743 F---FLIHTNFLVEMD 1755


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI------SQTWN 170
            K++LQTDA DQYW A+L+EE  GK+  CG ASG FK SE HYH+ FKEI       + +N
Sbjct: 1682 KKILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFN 1741

Query: 171  FEI*FLRQHQFEVQMD 218
            F   FL    F V+MD
Sbjct: 1742 F---FLIHTNFLVEMD 1754


>ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus]
          Length = 124

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = +3

Query: 15  VLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEISQT----WNFEI* 182
           +LQTDA DQYW A+L+EE  GK+ +C HASG FK SE +YH I+KEI         FE  
Sbjct: 1   ILQTDASDQYWSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEF- 59

Query: 183 FLRQHQFEVQMDNFHL*RSLNIK 251
            L  H F + MDN    R  + K
Sbjct: 60  HLISHTFLINMDNSSFPRIFDFK 82


>ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Populus trichocarpa]
           gi|550349213|gb|EEE85243.2| hypothetical protein
           POPTR_0001s38890g [Populus trichocarpa]
          Length = 309

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = +3

Query: 3   TQKRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI 155
           TQ R+LQTD  D+YW  +L+E+K G +  CG+ SGSFK SE HYH+ FKEI
Sbjct: 21  TQARILQTDVSDKYWSDVLLEDKNGHRHICGYKSGSFKESETHYHSTFKEI 71


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
 Frame = +3

Query: 9    KRVLQTDARDQYWGAILIEEKE-GKQLYCGHASGSFKPSELHYHTIFKEISQT----WNF 173
            KR+LQTDA D YWGA+L+E+ E GK+  CG+ SG FK SE HYH+ +KEI         F
Sbjct: 1529 KRILQTDASDCYWGAVLLEKDEKGKRSICGYKSGVFKDSEKHYHSTYKEILAVKRGIEKF 1588

Query: 174  EI*FLRQHQFEVQMD 218
            E   + QH F ++MD
Sbjct: 1589 ESHIVGQH-FLIEMD 1602


>ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 159

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKE 152
           KR+LQT+A D YWGA+LIE+  G + Y GHASG FK +E HYHT +KE
Sbjct: 94  KRILQTNASDHYWGALLIEDINGVKHYYGHASGQFKEAEKHYHTSYKE 141


>ref|XP_006398168.1| hypothetical protein EUTSA_v10001178mg, partial [Eutrema
           salsugineum] gi|557099257|gb|ESQ39621.1| hypothetical
           protein EUTSA_v10001178mg, partial [Eutrema salsugineum]
          Length = 278

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKEI 155
           K+   TDA D+YWGAIL EE  GK+  CG+ SG FK SE+HYH+ FKEI
Sbjct: 19  KQTEATDASDKYWGAILFEEINGKRQICGYKSGRFKDSEMHYHSTFKEI 67


>ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 168

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYHTIFKE 152
           KR LQTD  D Y GA+LIEE  G + YCGHA G FK +E HYHT +KE
Sbjct: 112 KRTLQTDVSDHYRGAVLIEEINGVKHYCGHACGQFKEAEKHYHTTYKE 159


>ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 441

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 9   KRVLQTDARDQYWGAILIEEKEGKQLYCGHASGSFKPSELHYH 137
           KR+LQT+  D YWGA+LIEE  G + YCGHASG FK +E HYH
Sbjct: 384 KRILQTNVIDHYWGALLIEEINGVKHYCGHASGQFKEAEKHYH 426