BLASTX nr result
ID: Cocculus23_contig00046762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00046762
(665 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-105
gb|EYU34118.1| hypothetical protein MIMGU_mgv1a003395mg [Mimulus... 380 e-103
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr... 379 e-103
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis] 377 e-102
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps... 376 e-102
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ... 375 e-102
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar... 374 e-101
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana] 374 e-101
ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prun... 373 e-101
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi... 372 e-101
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi... 371 e-100
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi... 370 e-100
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr... 370 e-100
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,... 369 e-100
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi... 368 e-100
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu... 367 1e-99
ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfam... 365 7e-99
gb|EPS61903.1| hypothetical protein M569_12888 [Genlisea aurea] 361 1e-97
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi... 357 1e-96
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi... 356 4e-96
>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product
[Vitis vinifera]
Length = 675
Score = 385 bits (988), Expect = e-105
Identities = 188/221 (85%), Positives = 207/221 (93%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDWI EEASY PSVFAYNV+IRNVLRAKQW+LA GLF+EMRQRA++PDR+TY
Sbjct: 134 DWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTY 193
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLITHFGKEG+FDSAL+WLQ+ME+DRV+GDLVLYSNLIELSRKL DYSKAISIFSRLK
Sbjct: 194 STLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 253
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GI+PDLVAYNSMINVFGKAKLFREAR LL EMR G+ PDTVSYSTLL+MYVEN ++VE
Sbjct: 254 SGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVE 313
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM EV CPLDLTTCN+MIDVYGQLDM KEADRLFW
Sbjct: 314 ALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFW 354
Score = 98.6 bits (244), Expect = 2e-18
Identities = 59/220 (26%), Positives = 119/220 (54%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L EMR + PD +Y
Sbjct: 240 DYSKAISIFSRL-KRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSY 298
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL++ + + G + AL+ +M E R DL + +I++ +L +A +F ++
Sbjct: 299 STLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRK 358
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P +V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y ++ +
Sbjct: 359 MGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEK 418
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++ + + A LF
Sbjct: 419 ATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLF 458
Score = 89.4 bits (220), Expect = 9e-16
Identities = 56/209 (26%), Positives = 103/209 (49%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP + +YN ++R A+ + A LF M+++ I + TY
Sbjct: 344 DMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K +A +F +L+
Sbjct: 404 NTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRS 463
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GI D V Y +MI + +A L A++LL E++ PD + T +T+ R E
Sbjct: 464 SGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEE 519
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D+T MID++ +
Sbjct: 520 ATWVFRQAFDAGEVKDITVFGCMIDLFSR 548
Score = 77.0 bits (188), Expect = 5e-12
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P +Y+TL+ +G+ LF A+ + M+ + ++V
Sbjct: 342 QLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I+++ KA A L ++
Sbjct: 402 TYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKL 461
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y A + E+K
Sbjct: 462 RSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 497
>gb|EYU34118.1| hypothetical protein MIMGU_mgv1a003395mg [Mimulus guttatus]
Length = 588
Score = 380 bits (977), Expect = e-103
Identities = 186/221 (84%), Positives = 204/221 (92%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDWI EEA Y PSVFAYNV++RNVLRAKQW++A GLFDEMRQRA+SPDR+TY
Sbjct: 63 DWQRSLALLDWINEEALYTPSVFAYNVVLRNVLRAKQWEIAHGLFDEMRQRALSPDRYTY 122
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLITHFGKEGLFD AL+WLQ+ME DRV GDLVLYSNLIELSRKL DYSKAISIFSRLK
Sbjct: 123 STLITHFGKEGLFDDALSWLQKMEHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 182
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINVFGKAKLFREAR L+ EMR AG+ PDTVSY+TLLTMYVEN+RF E
Sbjct: 183 SGITPDLVAYNSMINVFGKAKLFREARSLISEMRNAGVTPDTVSYTTLLTMYVENQRFPE 242
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM++V+C LDLTTCNIMIDVYG LDM KEAD+LFW
Sbjct: 243 ALSVFSEMRDVNCLLDLTTCNIMIDVYGHLDMAKEADKLFW 283
Score = 100 bits (248), Expect = 5e-19
Identities = 58/220 (26%), Positives = 118/220 (53%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L EMR ++PD +Y
Sbjct: 169 DYSKAISIFSRL-KRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRNAGVTPDTVSY 227
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+TL+T + + F AL+ +M + DL + +I++ L +A +F ++
Sbjct: 228 TTLLTMYVENQRFPEALSVFSEMRDVNCLLDLTTCNIMIDVYGHLDMAKEADKLFWGMRK 287
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P++V+YN+++ V+G A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 288 LGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEK 347
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM + + T + +I ++G++ + A LF
Sbjct: 348 ANNLIQEMHSRNIEPNAITYSTIISIWGKVGKLDRAAMLF 387
Score = 82.4 bits (202), Expect = 1e-13
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 31/248 (12%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M+++ I + TY
Sbjct: 273 DMAKEADKLFWGMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTY 332
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M + + + YS +I + K+ +A +F +L+
Sbjct: 333 NTMIMIYGKTMEHEKANNLIQEMHSRNIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRS 392
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMR-------------------------- 462
AGI D V Y +MI + +A L A++LL E++
Sbjct: 393 AGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRATAIRILAGAGRIEEATWV 452
Query: 463 -----EAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
+AG D + ++ ++ + R++ + +F M+ + D ++++ YG+
Sbjct: 453 FRQAVDAGEIKDIKVFEHMIHLFSKYRKYANVIEVFERMRAIGYFPDSNVIALVLNGYGK 512
Query: 628 LDMVKEAD 651
L ++AD
Sbjct: 513 LQEFEKAD 520
>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
gi|557106704|gb|ESQ47019.1| hypothetical protein
EUTSA_v10028245mg [Eutrema salsugineum]
Length = 683
Score = 379 bits (974), Expect = e-103
Identities = 182/221 (82%), Positives = 211/221 (95%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ EEA Y PSVFAYNV++RNVLRAKQ+D+A GLFDEMRQRA++PDR+TY
Sbjct: 139 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 198
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSAL+WLQ+ME+DRV+GDLVLYSNLIELSR+L DYSKAISIFSRLK
Sbjct: 199 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKK 258
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINV+GKAKLFREAR L+ EM+EAG+ P+TVSYSTLL++YVEN++F+E
Sbjct: 259 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLE 318
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EMKEV+CPLDLTTCN+MIDVYGQLDMVKEADRLFW
Sbjct: 319 ALSVFAEMKEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFW 359
Score = 91.3 bits (225), Expect = 2e-16
Identities = 56/220 (25%), Positives = 118/220 (53%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + +++ P + AYN +I +AK + AR L EM++ + P+ +Y
Sbjct: 245 DYSKAISIFSRL-KKSGITPDLVAYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSY 303
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL++ + + F AL+ +M+E DL + +I++ +L +A +F ++
Sbjct: 304 STLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRK 363
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++V+YN+++ V+G+A L EA L M+ + + V+Y+T++ MY + +
Sbjct: 364 MDIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQRKDIEQNVVTYNTMIKMYGKTLEHEK 423
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 424 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 463
Score = 90.5 bits (223), Expect = 4e-16
Identities = 54/209 (25%), Positives = 99/209 (47%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +I+ + + + A L EM+ R I P+ TYST+I+ +GK G
Sbjct: 395 LMQRKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 454
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYN 393
D A Q++ V D VLY +I ++ A + LK PD +
Sbjct: 455 KLDRAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQELK----QPDNIPRE 510
Query: 394 SMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEV 573
+ I + KA EA + + E+G D + ++++Y N+R+V + +F +M+
Sbjct: 511 TAITILAKAGRIEEATWVFRQAFESGEVKDITVFGCMISLYSRNQRYVNVIEVFEKMRSA 570
Query: 574 HCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D I+++ YG+ ++AD ++
Sbjct: 571 GYFPDSNAIAIVLNAYGKQREFEKADTVY 599
Score = 88.2 bits (217), Expect = 2e-15
Identities = 56/201 (27%), Positives = 101/201 (50%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN I+R A A LF M+++ I + TY+T+I +G
Sbjct: 357 LFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQRKDIEQNVVTYNTMIKMYG 416
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q+M+ + + + YS +I + K +A ++F +L+ +G+ D V
Sbjct: 417 KTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRRSGVEIDQV 476
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + + L A++LL E+++ PD + T +T+ + R EA +F +
Sbjct: 477 LYQTMIVAYERVGLMGHAKRLLQELKQ----PDNIPRETAITILAKAGRIEEATWVFRQA 532
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
E D+T MI +Y +
Sbjct: 533 FESGEVKDITVFGCMISLYSR 553
>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
Length = 688
Score = 377 bits (968), Expect = e-102
Identities = 184/221 (83%), Positives = 205/221 (92%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLA+LDWI E+A Y PSVFAYNV +RNVLRAKQW +A GLFDEMRQRA++PDR+TY
Sbjct: 145 DWQRSLAILDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTY 204
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT+FGKEG+FD+AL+WLQ+ME+DRV+GDLVLYSNLIELSRKL DYSKAISIFSRLK
Sbjct: 205 STLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKW 264
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINVFGKAKLFREAR L+ EMR AG+ PDTVSYSTLLTMYVEN++F+E
Sbjct: 265 SGITPDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIE 324
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM EV C LDLTTCNIMIDVYGQLDM KEADRLFW
Sbjct: 325 ALSVFSEMNEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFW 365
Score = 99.4 bits (246), Expect = 9e-19
Identities = 60/201 (29%), Positives = 111/201 (55%)
Frame = +1
Query: 58 PSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAW 237
P + AYN +I +AK + AR L EMR + PD +YSTL+T + + F AL+
Sbjct: 269 PDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSV 328
Query: 238 LQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGK 417
+M E R DL + +I++ +L +A +F ++ GI P++V+YN+++ V+G+
Sbjct: 329 FSEMNEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGE 388
Query: 418 AKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTT 597
A+LF EA L M+ + + V+Y+T++ +Y ++ +A ++ EM++ + T
Sbjct: 389 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAIT 448
Query: 598 CNIMIDVYGQLDMVKEADRLF 660
+ +I ++G+ + A LF
Sbjct: 449 YSTIISIWGKAGKLDRAAILF 469
Score = 89.0 bits (219), Expect = 1e-15
Identities = 55/209 (26%), Positives = 106/209 (50%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M+++ I + TY
Sbjct: 355 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 414
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M++ + + + YS +I + K +A +F +L+
Sbjct: 415 NTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRS 474
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + KA L A++LL E++ PD + T +T+ R E
Sbjct: 475 SGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRLEE 530
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D++ + MI+++ +
Sbjct: 531 ATWVFRQASDAGEIKDISVFSCMIELFSK 559
Score = 78.6 bits (192), Expect = 2e-12
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P+ +Y+TL+ +G+ LF A+ + M+ + ++V
Sbjct: 353 QLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVV 412
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I+++GKA A L ++
Sbjct: 413 TYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKL 472
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y + A + E+K
Sbjct: 473 RSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK 508
Score = 64.3 bits (155), Expect = 3e-08
Identities = 52/245 (21%), Positives = 103/245 (42%), Gaps = 38/245 (15%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
+++ EP+ Y+ II +A + D A LF ++R + D+ Y T+I + K GL
Sbjct: 437 MQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRSSGVEIDQVLYQTMIVAYEKAGL 496
Query: 217 FDSALAWLQQME-------EDRVT------------------------GDLVLYSNLIEL 303
A L +++ E +T D+ ++S +IEL
Sbjct: 497 VAHAKRLLHELKRPDNIPRETAITILAGAGRLEEATWVFRQASDAGEIKDISVFSCMIEL 556
Query: 304 SRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPD 483
K + Y+ +F +++G G PD ++N +GK + F +A + EM+E G
Sbjct: 557 FSKNKKYANLTEVFDKMRGVGYFPDSNVIALVLNAYGKLRDFEKADAVYKEMQEEGCVFS 616
Query: 484 TVSYSTLLTMYVENRRFVEALSIFSEM-------KEVHCPLDLTTCNIMIDVYGQLDMVK 642
+ ++++Y + F +F + KE+H ++ +Y + + +
Sbjct: 617 DEVHFQMISLYGARKDFKMVEELFERLESDPNINKELHL--------VVAGIYERANKLN 668
Query: 643 EADRL 657
+A R+
Sbjct: 669 DASRI 673
>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
gi|482554761|gb|EOA18954.1| hypothetical protein
CARUB_v10007588mg [Capsella rubella]
Length = 679
Score = 376 bits (966), Expect = e-102
Identities = 182/221 (82%), Positives = 210/221 (95%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ EEA Y PSV+AYNV++RNVLRAKQ+D+A GLFDEMRQRA++PDR+TY
Sbjct: 136 DWQRSLALLDWVHEEAKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 195
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSAL+WLQ+ME+DRV+GDLVLYSNLIELSR+L DYSKAISIFSRLK
Sbjct: 196 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKK 255
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINV+GKAKLFREAR L+ EM EAG+ P+TVSYSTLL++YVEN++F+E
Sbjct: 256 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLE 315
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EMKEV+CPLDLTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 316 ALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW 356
Score = 104 bits (260), Expect = 2e-20
Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
L W+ +E+ + Y+ +I R + A +F +++ I+PD Y+++I
Sbjct: 212 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMINV 271
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
+GK LF A +++M E V + V YS L+ + + + + +A+S+F+ +K D
Sbjct: 272 YGKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLD 331
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + +EA +L +R+ + P+ VSY+T+L +Y E F EA+ +F
Sbjct: 332 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 391
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 392 LMQRKDIEQNVVTYNTMIKIYGK 414
Score = 91.7 bits (226), Expect = 2e-16
Identities = 57/220 (25%), Positives = 119/220 (54%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + +++ P + AYN +I +AK + AR L EM + + P+ +Y
Sbjct: 242 DYSKAISIFSRL-KKSGITPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSY 300
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL++ + + F AL+ +M+E DL + +I++ +L +A +F L+
Sbjct: 301 STLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 360
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 361 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 420
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 421 ATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 460
Score = 85.9 bits (211), Expect = 1e-14
Identities = 54/201 (26%), Positives = 103/201 (51%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN I+R A+ + A LF M+++ I + TY+T+I +G
Sbjct: 354 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 413
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +++M+ + + + YS +I + K +A ++F +L+ +G+ D V
Sbjct: 414 KTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 473
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + + L A++LL E++ PD + T +T+ + R EA +F +
Sbjct: 474 LYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQA 529
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
E D++ MI++Y +
Sbjct: 530 FESGEVKDISVFGCMINLYSR 550
Score = 77.4 bits (189), Expect = 4e-12
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +I+ + + + A L EM+ R I P+ TYST+I+ +GK G
Sbjct: 392 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAG 451
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLI-------------------------------E 300
D A Q++ V D VLY +I
Sbjct: 452 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 511
Query: 301 LSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNP 480
+ K +A +F + +G D+ + MIN++ + + + ++ +MR AG P
Sbjct: 512 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 571
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D+ + + +L Y + R F +A +++ EM+E C M+ +Y + + LF
Sbjct: 572 DSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVETLF 631
>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316573|gb|EFH46996.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 680
Score = 375 bits (963), Expect = e-102
Identities = 181/221 (81%), Positives = 209/221 (94%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ EEA Y PSVFAYNV++RNVLRAKQ+ +A GLFDEMRQRA++PDR+TY
Sbjct: 136 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTY 195
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSAL+WLQ+ME+DRV+GDLVLYSNLIELSR+L DYSKAISIFSRLK
Sbjct: 196 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 255
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINV+GKAKLF+EAR L+ EM EAG++P+TVSYSTLL++YVEN +F+E
Sbjct: 256 SGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLE 315
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EMKEV+CPLDLTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 316 ALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW 356
Score = 106 bits (264), Expect = 7e-21
Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
L W+ +E+ + Y+ +I R + A +F +++ I+PD Y+++I
Sbjct: 212 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 271
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
+GK LF A +++M E V+ + V YS L+ + + + +A+S+F+ +K D
Sbjct: 272 YGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLD 331
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + +EA +L +R+ + P+ VSY+T+L +Y E F EA+ +F
Sbjct: 332 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 391
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 392 LMQRKDIEQNVVTYNTMIKIYGK 414
Score = 95.1 bits (235), Expect = 2e-17
Identities = 58/220 (26%), Positives = 119/220 (54%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L EM + +SP+ +Y
Sbjct: 242 DYSKAISIFSRL-KRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSY 300
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL++ + + F AL+ +M+E DL + +I++ +L +A +F L+
Sbjct: 301 STLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 360
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 361 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 420
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 421 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 460
Score = 86.7 bits (213), Expect = 6e-15
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 31/243 (12%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN I+R A+ + A LF M+++ I + TY+T+I +G
Sbjct: 354 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 413
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q+M+ + + + YS +I + K +A ++F +L+ +G+ D V
Sbjct: 414 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 473
Query: 385 AYNSMINVFGKAKLFREARQLLLEMR-------------------------------EAG 471
Y +MI + + L A++LL E++ E+G
Sbjct: 474 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFESG 533
Query: 472 LNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEAD 651
D + ++ +Y N+R+V + +F +M+ D ++++ YG+ ++AD
Sbjct: 534 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKAD 593
Query: 652 RLF 660
++
Sbjct: 594 TVY 596
Score = 79.0 bits (193), Expect = 1e-12
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +I+ + + + A L EM+ R I P+ TYST+I+ +GK G
Sbjct: 392 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 451
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLI-------------------------------E 300
D A Q++ V D VLY +I
Sbjct: 452 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 511
Query: 301 LSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNP 480
+ K +A +F + +G D+ + MIN++ + + + ++ +MR AG P
Sbjct: 512 ILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 571
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D+ + + +L Y + R F +A +++ EM+E C M+ +Y + + LF
Sbjct: 572 DSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF 631
>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product
[Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 678
Score = 374 bits (961), Expect = e-101
Identities = 182/221 (82%), Positives = 208/221 (94%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ EEA Y PSVFAYNV++RNVLRAKQ+D+A GLFDEMRQRA++PDR+TY
Sbjct: 134 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 193
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSAL+WLQ+ME+DRV+GDLVLYSNLIELSR+L DYSKAISIFSRLK
Sbjct: 194 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 253
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINV+GKAKLFREAR L+ EM EAG+ P+TVSYSTLL++YVEN +F+E
Sbjct: 254 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 313
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EMKEV+C LDLTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Score = 105 bits (261), Expect = 2e-20
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
L W+ +E+ + Y+ +I R + A +F +++ I+PD Y+++I
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
+GK LF A +++M E V + V YS L+ + + + +A+S+F+ +K D
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + +EA +L +R+ + P+ VSY+T+L +Y E F EA+ +F
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGK 412
Score = 92.4 bits (228), Expect = 1e-16
Identities = 57/220 (25%), Positives = 118/220 (53%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L EM + + P+ +Y
Sbjct: 240 DYSKAISIFSRL-KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL++ + + F AL+ +M+E DL + +I++ +L +A +F L+
Sbjct: 299 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Score = 87.4 bits (215), Expect = 4e-15
Identities = 55/201 (27%), Positives = 103/201 (51%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN I+R A+ + A LF M+++ I + TY+T+I +G
Sbjct: 352 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q+M+ + + + YS +I + K +A ++F +L+ +G+ D V
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + + L A++LL E++ PD + T +T+ + R EA +F +
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
E D++ MI++Y +
Sbjct: 528 FESGEVKDISVFGCMINLYSR 548
Score = 77.0 bits (188), Expect = 5e-12
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +I+ + + + A L EM+ R I P+ TYST+I+ +GK G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLI-------------------------------E 300
D A Q++ V D VLY +I
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 509
Query: 301 LSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNP 480
+ K +A +F + +G D+ + MIN++ + + + ++ +MR AG P
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 569
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D+ + +L Y + R F +A +++ EM+E C M+ +Y + + LF
Sbjct: 570 DSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF 629
>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 374 bits (961), Expect = e-101
Identities = 182/221 (82%), Positives = 208/221 (94%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ EEA Y PSVFAYNV++RNVLRAKQ+D+A GLFDEMRQRA++PDR+TY
Sbjct: 2 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 61
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSAL+WLQ+ME+DRV+GDLVLYSNLIELSR+L DYSKAISIFSRLK
Sbjct: 62 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 121
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINV+GKAKLFREAR L+ EM EAG+ P+TVSYSTLL++YVEN +F+E
Sbjct: 122 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 181
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EMKEV+C LDLTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 182 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 222
Score = 105 bits (261), Expect = 2e-20
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
L W+ +E+ + Y+ +I R + A +F +++ I+PD Y+++I
Sbjct: 78 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 137
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
+GK LF A +++M E V + V YS L+ + + + +A+S+F+ +K D
Sbjct: 138 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 197
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + +EA +L +R+ + P+ VSY+T+L +Y E F EA+ +F
Sbjct: 198 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 257
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 258 LMQRKDIEQNVVTYNTMIKIYGK 280
Score = 92.4 bits (228), Expect = 1e-16
Identities = 57/220 (25%), Positives = 118/220 (53%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L EM + + P+ +Y
Sbjct: 108 DYSKAISIFSRL-KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 166
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL++ + + F AL+ +M+E DL + +I++ +L +A +F L+
Sbjct: 167 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 226
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 227 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 286
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 287 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 326
Score = 87.4 bits (215), Expect = 4e-15
Identities = 55/201 (27%), Positives = 103/201 (51%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN I+R A+ + A LF M+++ I + TY+T+I +G
Sbjct: 220 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 279
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q+M+ + + + YS +I + K +A ++F +L+ +G+ D V
Sbjct: 280 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 339
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + + L A++LL E++ PD + T +T+ + R EA +F +
Sbjct: 340 LYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQA 395
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
E D++ MI++Y +
Sbjct: 396 FESGEVKDISVFGCMINLYSR 416
Score = 77.0 bits (188), Expect = 5e-12
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +I+ + + + A L EM+ R I P+ TYST+I+ +GK G
Sbjct: 258 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 317
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLI-------------------------------E 300
D A Q++ V D VLY +I
Sbjct: 318 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 377
Query: 301 LSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNP 480
+ K +A +F + +G D+ + MIN++ + + + ++ +MR AG P
Sbjct: 378 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 437
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D+ + +L Y + R F +A +++ EM+E C M+ +Y + + LF
Sbjct: 438 DSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF 497
>ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
gi|462411171|gb|EMJ16220.1| hypothetical protein
PRUPE_ppa003340mg [Prunus persica]
Length = 584
Score = 373 bits (958), Expect = e-101
Identities = 183/221 (82%), Positives = 202/221 (91%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLA+LDWI EEA Y PSVFAYNV+IRNVLRAKQW++A GLF+EMRQRA++PDR+TY
Sbjct: 43 DWQRSLAILDWINEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTY 102
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGK G+FDSAL+WLQ+ME+D V+GDLVLYSNLIELSRKL DYSKAISIFSRLK
Sbjct: 103 STLITSFGKAGMFDSALSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 162
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI PDLVAYNSMINVFGKAKLFREAR LL EMR G+ PDTVSYSTLL+MY+EN++FVE
Sbjct: 163 LGIMPDLVAYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVE 222
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM EV CPLDLTTCNIMIDVYGQLDM KEADRLFW
Sbjct: 223 ALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFW 263
Score = 94.7 bits (234), Expect = 2e-17
Identities = 57/201 (28%), Positives = 109/201 (54%)
Frame = +1
Query: 58 PSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAW 237
P + AYN +I +AK + AR L EMR + PD +YSTL++ + + F AL+
Sbjct: 167 PDLVAYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSV 226
Query: 238 LQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGK 417
+M E + DL + +I++ +L +A +F ++ G+ P++V+YN+++ V+G
Sbjct: 227 FSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGD 286
Query: 418 AKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTT 597
A+LF EA L M+ + + V+Y+T++ +Y ++ +A ++ EM+ + T
Sbjct: 287 AELFGEAIHLFRLMQRMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMT 346
Query: 598 CNIMIDVYGQLDMVKEADRLF 660
+ +I ++G+ + A LF
Sbjct: 347 YSTIISIWGKAGKLDRAAMLF 367
Score = 84.7 bits (208), Expect = 2e-14
Identities = 54/209 (25%), Positives = 102/209 (48%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M++ I + TY
Sbjct: 253 DMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRMDIEQNVVTY 312
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K +A +F +L+
Sbjct: 313 NTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRS 372
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + + L A++LL E++ PD + T +T+ R E
Sbjct: 373 SGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEE 428
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D++ MID++ +
Sbjct: 429 ATWVFRQAFDAGEVKDISVFGCMIDLFSR 457
Score = 77.4 bits (189), Expect = 4e-12
Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ + P+ +Y+TL+ +G LF A+ + M+ + ++V
Sbjct: 251 QLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRMDIEQNVV 310
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ +GI P+ + Y+++I+++GKA A L ++
Sbjct: 311 TYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKL 370
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y A + E+K
Sbjct: 371 RSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELK 406
Score = 63.2 bits (152), Expect = 7e-08
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 39/246 (15%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ + +P+ Y+ II +A + D A LF ++R + D+ Y T+I + + GL
Sbjct: 335 MQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGL 394
Query: 217 FDSALAWLQQME-------EDRVT------------------------GDLVLYSNLIEL 303
A L +++ E +T D+ ++ +I+L
Sbjct: 395 VAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDISVFGCMIDL 454
Query: 304 SRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPD 483
+ R Y+ I +F +++ AG P + ++N FGK + F +A L EM+E G
Sbjct: 455 FSRNRKYANCIEVFEKMRVAGYFPASNVIDLVLNAFGKLREFEKADALYREMQEEGCVFS 514
Query: 484 TVSYSTLLTMYVENRRFVEALSIFSEM--------KEVHCPLDLTTCNIMIDVYGQLDMV 639
+ +LT+Y + F ++F + KE+H ++ +Y + + +
Sbjct: 515 DEVHFQMLTLYGARKDFKMVEALFKRLMCDPNINKKELHL--------VVASIYERSNRL 566
Query: 640 KEADRL 657
+A R+
Sbjct: 567 NDASRI 572
>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 372 bits (955), Expect = e-101
Identities = 181/221 (81%), Positives = 205/221 (92%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLA+LDWI EEA Y PSV+AYNV++RNVLRAKQW+LA GLFDEMRQRA++ DR+TY
Sbjct: 138 DWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTY 197
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT+FGKEG+FD+AL+WLQ+ME+DRV+GDLVLYSNLIELSRKL DYSKAISIFSRLK
Sbjct: 198 STLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 257
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPD+VAYN+MINVFGKAKLFREAR LL EMR + PDTVSYSTLL M+VEN +F+E
Sbjct: 258 SGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLE 317
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+ SEMKEV+CPLDLTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 318 ALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW 358
Score = 110 bits (274), Expect = 5e-22
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Frame = +1
Query: 19 ALLDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLI 192
A L W+ +E+ + Y+ +I + + A +F +++ I+PD Y+T+I
Sbjct: 212 AALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMI 271
Query: 193 THFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGIT 372
FGK LF A L++M V D V YS L+ + + + +A+S+ S +K
Sbjct: 272 NVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCP 331
Query: 373 PDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSI 552
DL N MI+V+G+ + +EA +L MR+ G+ P+ VSY+T+L +Y E F EA+ +
Sbjct: 332 LDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHL 391
Query: 553 FSEMKEVHCPLDLTTCNIMIDVYGQ 627
F M+ ++ T N MI +YG+
Sbjct: 392 FRLMQRKEIKQNVVTYNTMIKIYGK 416
Score = 99.4 bits (246), Expect = 9e-19
Identities = 59/220 (26%), Positives = 121/220 (55%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L EMR + PD +Y
Sbjct: 244 DYSKAISIFSRL-KRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSY 302
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL+ F + F AL+ + +M+E DL + +I++ +L +A +F R++
Sbjct: 303 STLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRK 362
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P++V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 363 IGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEK 422
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ +M++ + T + +I ++G+ + + LF
Sbjct: 423 ATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLF 462
Score = 87.8 bits (216), Expect = 3e-15
Identities = 55/201 (27%), Positives = 104/201 (51%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN I+R A+ + A LF M+++ I + TY+T+I +G
Sbjct: 356 LFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYG 415
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q M++ + + + YS +I + K ++ +F +L+ +G D V
Sbjct: 416 KTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQV 475
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + KA L A++LL E+++ PD + +T +T+ + R EA +F +
Sbjct: 476 LYQTMIVAYEKAGLVGHAKRLLHELKQ----PDNIPRTTAITILAKAGRIEEATWVFRQA 531
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
+ D++ MID++ +
Sbjct: 532 FDAGELKDISVFECMIDLFSR 552
>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum lycopersicum]
Length = 665
Score = 371 bits (952), Expect = e-100
Identities = 183/221 (82%), Positives = 201/221 (90%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDWI E A Y PSVFAYNV +RNVLRAKQW LA GLFDEMRQRA+SPDR+TY
Sbjct: 126 DWQRSLALLDWINEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTY 185
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT+FGKEGLFD AL+WLQ+ME+D V+GDLVLY NLIELSRKL DY+KAISIFSRLK
Sbjct: 186 STLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKT 245
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYN+MINVFGKAKLFREA+ L+ EMR G+ PDTVSYSTLLTMYVEN++F+E
Sbjct: 246 SGITPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLE 305
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM EV CPLDLTTCNIMIDVYGQLDM KEADRLFW
Sbjct: 306 ALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFW 346
Score = 97.4 bits (241), Expect = 3e-18
Identities = 57/208 (27%), Positives = 113/208 (54%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ + P + AYN +I +AK + A+ L EMR + PD +YSTL+T + +
Sbjct: 243 LKTSGITPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQK 302
Query: 217 FDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNS 396
F AL+ +M E + DL + +I++ +L +A +F ++ GI P++V+YN+
Sbjct: 303 FLEALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNT 362
Query: 397 MINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVH 576
++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +A ++ EM+ +
Sbjct: 363 LLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIG 422
Query: 577 CPLDLTTCNIMIDVYGQLDMVKEADRLF 660
+ T + +I ++ ++ + A LF
Sbjct: 423 IEPNAITYSTIISIWAKVGKLDRAAMLF 450
Score = 88.6 bits (218), Expect = 2e-15
Identities = 55/209 (26%), Positives = 105/209 (50%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M+++ I + TY
Sbjct: 336 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTY 395
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K+ +A +F +L+
Sbjct: 396 NTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRS 455
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + +A L A++LL E++ PD + T +T+ + R E
Sbjct: 456 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGSGRIEE 511
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D+ MI++Y +
Sbjct: 512 ATWVFRQAFDAGELKDIAVFECMIELYSR 540
Score = 77.0 bits (188), Expect = 5e-12
Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P+ +Y+TL+ +G+ LF A+ + M+ + ++V
Sbjct: 334 QLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVV 393
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I+++ K A L ++
Sbjct: 394 TYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKL 453
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y A + E+K
Sbjct: 454 RSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 489
Score = 62.0 bits (149), Expect = 2e-07
Identities = 50/246 (20%), Positives = 101/246 (41%), Gaps = 39/246 (15%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ EP+ Y+ II + + D A LF ++R + D+ Y T+I + + GL
Sbjct: 418 MQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 477
Query: 217 FDSALAWLQQME-------EDRVT------------------------GDLVLYSNLIEL 303
A L +++ E +T D+ ++ +IEL
Sbjct: 478 VAHAKRLLHELKRPDNIPRETAITILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIEL 537
Query: 304 SRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPD 483
+ R Y+ I +F ++ GAG P+ ++N +GK + F +A + EM E G
Sbjct: 538 YSRNRKYTNLIEVFEKMSGAGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFS 597
Query: 484 TVSYSTLLTMYVENRRFVEALSIFSEM--------KEVHCPLDLTTCNIMIDVYGQLDMV 639
+ +L++Y R + +++ + KE+H ++ +Y + + +
Sbjct: 598 DEVHFQMLSLYGARRNYEMVETLYKVLDSDPNVNKKELHL--------VVAAIYEKANRM 649
Query: 640 KEADRL 657
+A R+
Sbjct: 650 NDASRI 655
>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Citrus sinensis]
Length = 677
Score = 370 bits (951), Expect = e-100
Identities = 178/221 (80%), Positives = 204/221 (92%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
++QRS+A+LDWI EEA Y PSVFAYNV++RNVLRAKQW+LA GLFDEMRQR I+PDR+TY
Sbjct: 133 NYQRSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 192
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSA++WLQQME+DRV+GDLVLYSNLIEL+RKL DYSKAISIFSRLK
Sbjct: 193 STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 252
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GI PDLVAYN+MINVFGKAKLF+EAR L+ EMRE G+ PDTVSYSTLL +YVEN +FVE
Sbjct: 253 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 312
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EM EV+CPLDLTTCNIMIDVYGQLDM K+ADRLFW
Sbjct: 313 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 353
Score = 112 bits (279), Expect = 1e-22
Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
+ W+ +E+ + Y+ +I + + A +F ++ I PD Y+T+I
Sbjct: 209 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 268
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
FGK LF A +++M E V D V YS L+ L + + +A+S+F+ + D
Sbjct: 269 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 328
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + ++A +L MR+ G++P VSY+TLL +Y E F EA+ +F
Sbjct: 329 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 388
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 389 LMQRKEIEQNVVTYNTMIKIYGK 411
Score = 99.0 bits (245), Expect = 1e-18
Identities = 59/220 (26%), Positives = 119/220 (54%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L +EMR++ + PD +Y
Sbjct: 239 DYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 297
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL+ + + F AL+ +M E DL + +I++ +L A +F ++
Sbjct: 298 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 357
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P +V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y ++ +
Sbjct: 358 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 417
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 418 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 457
Score = 87.8 bits (216), Expect = 3e-15
Identities = 54/209 (25%), Positives = 105/209 (50%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + +PSV +YN ++R A+ + A LF M+++ I + TY
Sbjct: 343 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 402
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K +A +F +L+
Sbjct: 403 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 462
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + + L A++LL E+R+ P+T+ T +T+ R E
Sbjct: 463 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 518
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D++ MI+++ +
Sbjct: 519 ATWVFRQAFDAGEVKDISVFGCMIELFSR 547
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P +Y+TL+ +G+ LF A+ + M+ + ++V
Sbjct: 341 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 400
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I ++GKA A L ++
Sbjct: 401 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 460
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKE 570
R +G+ D V Y T++ Y A + E+++
Sbjct: 461 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 497
Score = 62.4 bits (150), Expect = 1e-07
Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 39/246 (15%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ EP+ Y+ II +A + D A LF ++R + D Y T+I + + GL
Sbjct: 425 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 484
Query: 217 FDSALAWLQQMEEDRV-------------------------------TGDLVLYSNLIEL 303
A L ++ + D+ ++ +IEL
Sbjct: 485 VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 544
Query: 304 SRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPD 483
+ + Y+ I +F +++ AG PD ++N +GK + F A L EM+E G
Sbjct: 545 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 604
Query: 484 TVSYSTLLTMYVENRRFVEALSIFSEM--------KEVHCPLDLTTCNIMIDVYGQLDMV 639
+ +L++Y + F S+F + KE+H +++ +Y + + +
Sbjct: 605 DQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH--------HVVAGIYERANRL 656
Query: 640 KEADRL 657
+A R+
Sbjct: 657 NDASRI 662
>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
gi|557533112|gb|ESR44295.1| hypothetical protein
CICLE_v10011224mg [Citrus clementina]
Length = 677
Score = 370 bits (951), Expect = e-100
Identities = 178/221 (80%), Positives = 204/221 (92%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
++QRS+A+LDWI EEA Y PSVFAYNV++RNVLRAKQW+LA GLFDEMRQR I+PDR+TY
Sbjct: 133 NYQRSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 192
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGKEG+FDSA++WLQQME+DRV+GDLVLYSNLIEL+RKL DYSKAISIFSRLK
Sbjct: 193 STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 252
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GI PDLVAYN+MINVFGKAKLF+EAR L+ EMRE G+ PDTVSYSTLL +YVEN +FVE
Sbjct: 253 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 312
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EM EV+CPLDLTTCNIMIDVYGQLDM K+ADRLFW
Sbjct: 313 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 353
Score = 112 bits (279), Expect = 1e-22
Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
+ W+ +E+ + Y+ +I + + A +F ++ I PD Y+T+I
Sbjct: 209 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 268
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
FGK LF A +++M E V D V YS L+ L + + +A+S+F+ + D
Sbjct: 269 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 328
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + ++A +L MR+ G++P VSY+TLL +Y E F EA+ +F
Sbjct: 329 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 388
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 389 LMQRKEIEQNVVTYNTMIKIYGK 411
Score = 99.0 bits (245), Expect = 1e-18
Identities = 59/220 (26%), Positives = 119/220 (54%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +AK + AR L +EMR++ + PD +Y
Sbjct: 239 DYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 297
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL+ + + F AL+ +M E DL + +I++ +L A +F ++
Sbjct: 298 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 357
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P +V+YN+++ V+G+A+LF EA L M+ + + V+Y+T++ +Y ++ +
Sbjct: 358 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 417
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 418 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 457
Score = 89.7 bits (221), Expect = 7e-16
Identities = 55/209 (26%), Positives = 105/209 (50%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + +PSV +YN ++R A+ + A LF M+++ I + TY
Sbjct: 343 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 402
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K +A +F +L+
Sbjct: 403 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 462
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + + L A++LL E+R+ PDT+ T +T+ R E
Sbjct: 463 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PDTIPRETAITILARAGRIEE 518
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D++ MI+++ +
Sbjct: 519 ATWVFRQAFDAGEVKDISVFGCMIELFSR 547
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P +Y+TL+ +G+ LF A+ + M+ + ++V
Sbjct: 341 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 400
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I ++GKA A L ++
Sbjct: 401 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 460
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKE 570
R +G+ D V Y T++ Y A + E+++
Sbjct: 461 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 497
Score = 62.0 bits (149), Expect = 2e-07
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 39/246 (15%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ EP+ Y+ II +A + D A LF ++R + D Y T+I + + GL
Sbjct: 425 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 484
Query: 217 FDSALAWLQQMEED----RVTG---------------------------DLVLYSNLIEL 303
A L ++ + R T D+ ++ +IEL
Sbjct: 485 VAHAKRLLHELRQPDTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 544
Query: 304 SRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPD 483
+ + Y+ I +F +++ AG PD ++N +GK + F A L EM+E G
Sbjct: 545 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 604
Query: 484 TVSYSTLLTMYVENRRFVEALSIFSEM--------KEVHCPLDLTTCNIMIDVYGQLDMV 639
+ +L++Y + F S+F + KE+H +++ +Y + + +
Sbjct: 605 DQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH--------HVVAGIYERANRL 656
Query: 640 KEADRL 657
+A R+
Sbjct: 657 NDASRI 662
>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 369 bits (946), Expect = e-100
Identities = 181/221 (81%), Positives = 200/221 (90%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDWI E A Y PSVFAYNV++RNVLRAK+WDLA GLFDEMRQRA+SPDR+TY
Sbjct: 113 DWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTY 172
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGK G+FD +L WLQQME+DRV+GDLVLYSNLIELSRKL DYSKAISIF RLK
Sbjct: 173 STLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKR 232
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYNSMINVFGKA+LFREAR L+ EMRE G+ PDTVSYSTLL++YVEN +FVE
Sbjct: 233 SGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVE 292
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EM E +C LDL TCNIMIDVYGQLDMVKEADRLFW
Sbjct: 293 ALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFW 333
Score = 108 bits (271), Expect = 1e-21
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
L W+ +E+ + Y+ +I + + A +F +++ I+PD Y+++I
Sbjct: 189 LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINV 248
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
FGK LF A + +M E V D V YS L+ + + + +A+S+F+ + A + D
Sbjct: 249 FGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLD 308
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L+ N MI+V+G+ + +EA +L MR+ G+ P+ VSY+TLL +Y E F EA+ +F
Sbjct: 309 LMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFR 368
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI +YG+
Sbjct: 369 LMQRKEIEQNVVTYNTMIKIYGK 391
Score = 97.4 bits (241), Expect = 3e-18
Identities = 57/208 (27%), Positives = 116/208 (55%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ + P + AYN +I +A+ + AR L EMR+ + PD +YSTL++ + +
Sbjct: 230 LKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEK 289
Query: 217 FDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNS 396
F AL+ +M E + DL+ + +I++ +L +A +F ++ GI P++V+YN+
Sbjct: 290 FVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNT 349
Query: 397 MINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVH 576
++ V+G+A+LF EA L M+ + + V+Y+T++ +Y ++ +A ++ EM++
Sbjct: 350 LLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRG 409
Query: 577 CPLDLTTCNIMIDVYGQLDMVKEADRLF 660
+ T + +I ++G+ + A LF
Sbjct: 410 IEPNAITYSTIISIWGKAGKLDRAAMLF 437
Score = 83.2 bits (204), Expect = 7e-14
Identities = 51/208 (24%), Positives = 104/208 (50%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
+ EA+ + N++I + A LF MR+ I P+ +Y+TL+ +G+ L
Sbjct: 300 MNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAEL 359
Query: 217 FDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNS 396
F A+ + M+ + ++V Y+ +I++ K ++ KA ++ ++ GI P+ + Y++
Sbjct: 360 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYST 419
Query: 397 MINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVH 576
+I+++GKA A L ++R +G+ D V Y T++ Y A + ++K
Sbjct: 420 IISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLK--- 476
Query: 577 CPLDLTTCNIMIDVYGQLDMVKEADRLF 660
CP D+ + I + + ++EA +F
Sbjct: 477 CP-DIIPRDTAIKILARAGRIEEATWVF 503
Score = 82.8 bits (203), Expect = 9e-14
Identities = 51/209 (24%), Positives = 101/209 (48%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +I+ ++ + + A L EM++R I P+ TYST+I+ +GK G
Sbjct: 369 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAG 428
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYN 393
D A Q++ V D VLY +I + + A + LK PD++ +
Sbjct: 429 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLK----CPDIIPRD 484
Query: 394 SMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEV 573
+ I + +A EA + + +AG D + ++ ++ N+R + +F +M+
Sbjct: 485 TAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGA 544
Query: 574 HCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D ++++ YG+L ++AD ++
Sbjct: 545 GYFPDSDVIALVLNAYGKLREFEKADAVY 573
Score = 81.6 bits (200), Expect = 2e-13
Identities = 50/201 (24%), Positives = 102/201 (50%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + EP+V +YN +++ A+ + A LF M+++ I + TY+T+I +G
Sbjct: 331 LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 390
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q+M++ + + + YS +I + K +A +F +L+ +G+ D V
Sbjct: 391 KSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 450
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + +A L A++LL +++ PD + T + + R EA +F +
Sbjct: 451 LYQTMIVAYERAGLVAHAKRLLHDLK----CPDIIPRDTAIKILARAGRIEEATWVFRQA 506
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
+ D++ MI+++ +
Sbjct: 507 FDAGEVKDISVFRCMIELFSR 527
Score = 62.0 bits (149), Expect = 2e-07
Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 40/247 (16%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
+++ EP+ Y+ II +A + D A LF ++R + D+ Y T+I + + GL
Sbjct: 405 MQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 464
Query: 217 F------------------DSAL------------AWL-QQMEEDRVTGDLVLYSNLIEL 303
D+A+ W+ +Q + D+ ++ +IEL
Sbjct: 465 VAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIEL 524
Query: 304 SRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAG-LNP 480
+ + + + +F +++GAG PD ++N +GK + F +A + EM+E + P
Sbjct: 525 FSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFP 584
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEM--------KEVHCPLDLTTCNIMIDVYGQLDM 636
D V + +L++Y + F+ S+F ++ KE+H ++ +Y + +
Sbjct: 585 DEVHFQ-MLSLYGARKDFIMVESLFEKLDSDPNINKKELHL--------VVASIYERQNR 635
Query: 637 VKEADRL 657
+ +A R+
Sbjct: 636 LNDASRI 642
>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum tuberosum]
Length = 668
Score = 368 bits (945), Expect = e-100
Identities = 182/221 (82%), Positives = 200/221 (90%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDWI E A Y PSVFAYNV +RNVLRAKQW LA GLFDEMRQRA+SPDR+TY
Sbjct: 129 DWQRSLALLDWINEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTY 188
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT+FGKEGLFD AL+WLQ+ME+D V+GDLVLY NLIELSRKL DY+KAISIFSRLK
Sbjct: 189 STLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKT 248
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYN+MINVFGKAKLFREA+ L+ EMR G+ PDTVSYSTLLTMYVEN++F+E
Sbjct: 249 SGITPDLVAYNTMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLE 308
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM EV C LDLTTCNIMIDVYGQLDM KEADRLFW
Sbjct: 309 ALSVFSEMNEVKCSLDLTTCNIMIDVYGQLDMAKEADRLFW 349
Score = 100 bits (250), Expect = 3e-19
Identities = 58/208 (27%), Positives = 115/208 (55%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ + P + AYN +I +AK + A+ L EMR + PD +YSTL+T + +
Sbjct: 246 LKTSGITPDLVAYNTMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQK 305
Query: 217 FDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNS 396
F AL+ +M E + + DL + +I++ +L +A +F ++ GI P++V+YN+
Sbjct: 306 FLEALSVFSEMNEVKCSLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNT 365
Query: 397 MINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVH 576
++ V+G+A+LF EA L M+ + + V+Y+T++ +Y + +A ++ EM+ +
Sbjct: 366 LLRVYGEAELFGEAIHLFRLMQRKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIG 425
Query: 577 CPLDLTTCNIMIDVYGQLDMVKEADRLF 660
+ T + +I ++G++ + A LF
Sbjct: 426 IEPNAITYSTIISIWGKVGKLDRAAMLF 453
Score = 87.4 bits (215), Expect = 4e-15
Identities = 56/251 (22%), Positives = 117/251 (46%), Gaps = 31/251 (12%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M++++I + TY
Sbjct: 339 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKSIEQNVVTY 398
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K+ +A +F +L+
Sbjct: 399 NTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRS 458
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMR-------------------------- 462
+G+ D V Y +MI + +A L A++LL E++
Sbjct: 459 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILAGSGRIEEATWV 518
Query: 463 -----EAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
+AG D + ++ +Y NR++ + +F +M+ + ++++ YG+
Sbjct: 519 FRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMRGTGYFPNSNVIALVLNAYGK 578
Query: 628 LDMVKEADRLF 660
L ++AD ++
Sbjct: 579 LQEFEKADMVY 589
Score = 79.0 bits (193), Expect = 1e-12
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P+ +Y+TL+ +G+ LF A+ + M+ + ++V
Sbjct: 337 QLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKSIEQNVV 396
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I+++GK A L ++
Sbjct: 397 TYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 456
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y A + E+K
Sbjct: 457 RSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 492
>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
gi|550320029|gb|EEF04162.2| hypothetical protein
POPTR_0017s11210g [Populus trichocarpa]
Length = 639
Score = 367 bits (943), Expect = 1e-99
Identities = 178/221 (80%), Positives = 199/221 (90%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDWI + A Y PSVFAYNV++RNVLRAKQWD A GLFDEMR RA++PDR+TY
Sbjct: 96 DWQRSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTY 155
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLITHFGK G+FD++L WLQQME+DRV+GDLVLYSNLIELSRKL DYSKAISIF RLK
Sbjct: 156 STLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKR 215
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GI PDLVAYNSMINVFGKAKLFREA+ L+ EMRE G+ PDTVSYSTLL++YVEN +FVE
Sbjct: 216 SGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVE 275
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EM E CPLDLTTCN+MIDVYGQLDM KEADRLFW
Sbjct: 276 ALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFW 316
Score = 108 bits (270), Expect = 2e-21
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Frame = +1
Query: 19 ALLDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLI 192
A L W+ +E+ + Y+ +I + + A +F +++ I PD Y+++I
Sbjct: 170 ASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMI 229
Query: 193 THFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGIT 372
FGK LF A +++M E V D V YS L+ + + + +A+S+F+ + A
Sbjct: 230 NVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCP 289
Query: 373 PDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSI 552
DL N MI+V+G+ + +EA +L MR+ G+ P+ VSY+TLL +Y E F EA+ +
Sbjct: 290 LDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHL 349
Query: 553 FSEMKEVHCPLDLTTCNIMIDVYGQ 627
F M++ ++ T N MI VYG+
Sbjct: 350 FRLMQKKDIEQNVVTYNTMIKVYGK 374
Score = 95.9 bits (237), Expect = 1e-17
Identities = 56/208 (26%), Positives = 114/208 (54%)
Frame = +1
Query: 37 IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEGL 216
++ + P + AYN +I +AK + A+ L EMR+ + PD +YSTL++ + +
Sbjct: 213 LKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEK 272
Query: 217 FDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNS 396
F AL+ +M E + DL + +I++ +L +A +F ++ GI P++V+YN+
Sbjct: 273 FVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNT 332
Query: 397 MINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEVH 576
++ V+G+ +LF EA L M++ + + V+Y+T++ +Y ++ +A ++ EM+
Sbjct: 333 LLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRG 392
Query: 577 CPLDLTTCNIMIDVYGQLDMVKEADRLF 660
+ T + +I ++G+ + A LF
Sbjct: 393 IEPNAITYSTIISIWGKAGKLDRAAMLF 420
Score = 84.7 bits (208), Expect = 2e-14
Identities = 51/209 (24%), Positives = 104/209 (49%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R + + A LF M+++ I + TY
Sbjct: 306 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTY 365
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K +A +F +L+
Sbjct: 366 NTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 425
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + ++ L A++LL E++ +PD++ T + + R E
Sbjct: 426 SGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELK----HPDSIPRETAIKILARAGRIEE 481
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D++ M+D++ +
Sbjct: 482 ATWVFRQAFDAGEVKDISVFGCMVDLFSR 510
Score = 83.6 bits (205), Expect = 5e-14
Identities = 52/209 (24%), Positives = 99/209 (47%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
++++ E +V YN +I+ ++ + + A L EM+ R I P+ TYST+I+ +GK G
Sbjct: 352 LMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAG 411
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYN 393
D A Q++ V D VLY +I + + A + LK PD +
Sbjct: 412 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKH----PDSIPRE 467
Query: 394 SMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEV 573
+ I + +A EA + + +AG D + ++ ++ NR+ + +F +M+
Sbjct: 468 TAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGA 527
Query: 574 HCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
D ++++ YG+L ++AD L+
Sbjct: 528 GYFPDSNVIALVLNAYGKLHEFEKADALY 556
Score = 81.6 bits (200), Expect = 2e-13
Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P+ +Y+TL+ +G+ LF A+ + M++ + ++V
Sbjct: 304 QLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVV 363
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I+++GKA A L ++
Sbjct: 364 TYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKL 423
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y + A + E+K
Sbjct: 424 RSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELK 459
>ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508711449|gb|EOY03346.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 672
Score = 365 bits (937), Expect = 7e-99
Identities = 174/221 (78%), Positives = 201/221 (90%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ EEA Y PS+FAYNV+IRNV++AKQW +A GLF+EMR++ ++PDRFTY
Sbjct: 131 DWQRSLALLDWVNEEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTY 190
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT+FGKEG+FDSAL+WLQ+ME D V+GDLVL+SNLIELSRKLRDYSKAISIF++LK
Sbjct: 191 STLITYFGKEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKR 250
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GI PDLV YNSMINVFGKAKLFREAR L+ EMR+ G+ PDTVSYST+L MYVEN +FVE
Sbjct: 251 SGIVPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVE 310
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+F+EM EV CPLDLTTCNIMIDVYGQLDM KEADRLFW
Sbjct: 311 ALSVFAEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFW 351
Score = 92.4 bits (228), Expect = 1e-16
Identities = 56/220 (25%), Positives = 118/220 (53%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + + P + YN +I +AK + AR L EMR + PD +Y
Sbjct: 237 DYSKAISIFNKL-KRSGIVPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSY 295
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
ST++ + + F AL+ +M E + DL + +I++ +L +A +F ++
Sbjct: 296 STVLNMYVENHKFVEALSVFAEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRK 355
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P++V+YN+++ V+G+A+L+ EA L M + + V+Y+T++ +Y ++ +
Sbjct: 356 MGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEK 415
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + +I ++G+ + A LF
Sbjct: 416 AYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLF 455
Score = 85.9 bits (211), Expect = 1e-14
Identities = 53/209 (25%), Positives = 104/209 (49%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN +++ A+ + A LF M ++ I + TY
Sbjct: 341 DMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTY 400
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M+ + + + YS +I + K +A +F +L+
Sbjct: 401 NTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 460
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + +A L A++LL E+++ PD + T + + R E
Sbjct: 461 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQ----PDNLPRDTAIMILARAGRIEE 516
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + + D++ +MID++ +
Sbjct: 517 ATWVFRQACDAGEVKDISVFGLMIDLFSR 545
Score = 78.2 bits (191), Expect = 2e-12
Identities = 42/157 (26%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P+ +Y+TL+ +G+ L+ A+ + M + ++V
Sbjct: 339 QLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVV 398
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I++ K ++ KA ++ ++ GI P+ + Y+++I+++GKA A L ++
Sbjct: 399 TYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKL 458
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKE 570
R +G+ D V Y T++ Y A + E+K+
Sbjct: 459 RSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQ 495
>gb|EPS61903.1| hypothetical protein M569_12888 [Genlisea aurea]
Length = 611
Score = 361 bits (926), Expect = 1e-97
Identities = 173/221 (78%), Positives = 201/221 (90%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQRSLALLDW+ + A Y+PSV+AYNV++RNVLRAKQW++A GLFDEMRQRAISPDR+TY
Sbjct: 113 DWQRSLALLDWMNDIARYDPSVYAYNVVLRNVLRAKQWEIAHGLFDEMRQRAISPDRYTY 172
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLITH GKEGLFD AL+WLQ+MEED V GDLVLYSNLIELSRKLRDYSKAISIFS+LK
Sbjct: 173 STLITHSGKEGLFDDALSWLQKMEEDGVPGDLVLYSNLIELSRKLRDYSKAISIFSKLKR 232
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+GITPDLVAYN+MINVFGKA+LF EAR L+ EM +G+ PDTVSYSTLL +YVEN++F +
Sbjct: 233 SGITPDLVAYNTMINVFGKARLFHEARSLIGEMTTSGIIPDTVSYSTLLAIYVENKKFTD 292
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM+++ CPLDLTTCN+MIDVYG LDM KEAD+LFW
Sbjct: 293 ALSVFSEMRKMKCPLDLTTCNMMIDVYGLLDMAKEADKLFW 333
Score = 88.6 bits (218), Expect = 2e-15
Identities = 54/220 (24%), Positives = 113/220 (51%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + + P + AYN +I +A+ + AR L EM I PD +Y
Sbjct: 219 DYSKAISIFSKL-KRSGITPDLVAYNTMINVFGKARLFHEARSLIGEMTTSGIIPDTVSY 277
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL+ + + F AL+ +M + + DL + +I++ L +A +F ++
Sbjct: 278 STLLAIYVENKKFTDALSVFSEMRKMKCPLDLTTCNMMIDVYGLLDMAKEADKLFWSMRK 337
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++++YN+++ V+G A+LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 338 IEIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTMEHEK 397
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM+ + T + MI ++ ++ + A F
Sbjct: 398 ADNLLREMQGKKIEPNSITYSTMISIWSKVGKLDRAAMFF 437
Score = 79.0 bits (193), Expect = 1e-12
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M+++ I + TY
Sbjct: 323 DMAKEADKLFWSMRKIEIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTY 382
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T++ +GK + A L++M+ ++ + + YS +I + K+ +A F +L+
Sbjct: 383 NTMMMIYGKTMEHEKADNLLREMQGKKIEPNSITYSTMISIWSKVGKLDRAAMFFQKLRR 442
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMR-------------------------- 462
+G+ D + Y +MI + KA L ++LL E++
Sbjct: 443 SGVEIDQILYQTMIVAYEKAGLVGHLKRLLAELKFPDNIPRESAVLVLAGAGRIEEAAWV 502
Query: 463 -----EAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEV-HCPLDLTTCNIMIDVYG 624
+ G + +++++ R++ + +F M+E H P D T +++ YG
Sbjct: 503 FRRAVDGGEIKTIGVFKRMISLFYRYRKYGNVIEVFDRMREAGHFP-DSKTIGFVLNAYG 561
Query: 625 QLDMVKEADRLF 660
+ + +A+ LF
Sbjct: 562 KRSEIDKAENLF 573
Score = 68.9 bits (167), Expect = 1e-09
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 31/235 (13%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN ++ + + + A L EM+ + I P+ TYST+I+ + K G
Sbjct: 369 LMQRKDIEQNVVTYNTMMMIYGKTMEHEKADNLLREMQGKKIEPNSITYSTMISIWSKVG 428
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLI----------ELSRKLRDYS------------ 327
D A + Q++ V D +LY +I L R L +
Sbjct: 429 KLDRAAMFFQKLRRSGVEIDQILYQTMIVAYEKAGLVGHLKRLLAELKFPDNIPRESAVL 488
Query: 328 ---------KAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNP 480
+A +F R G + + MI++F + + + ++ MREAG P
Sbjct: 489 VLAGAGRIEEAAWVFRRAVDGGEIKTIGVFKRMISLFYRYRKYGNVIEVFDRMREAGHFP 548
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKE 645
D+ + +L Y + +A ++F EM+E C L + M+++ G + ++
Sbjct: 549 DSKTIGFVLNAYGKRSEIDKAENLFREMQEEGCVLSSDVHSQMLNLVGMKKLTEK 603
>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 357 bits (917), Expect = 1e-96
Identities = 174/221 (78%), Positives = 197/221 (89%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DWQR+LALLDWI ++A Y PS+FAYNV++RNVLRAKQW LA GLFDEMRQ+ +SPDR+TY
Sbjct: 123 DWQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTY 182
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGK GLFDS+L WLQQME+D V+GDLVLYSNLI+L+RKL DYSKAISIFSRLK
Sbjct: 183 STLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKA 242
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+ ITPDL+AYNSMINVFGKAKLFREAR LL EMR+ + PDTVSYSTLL +YV+N++FVE
Sbjct: 243 STITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVE 302
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
ALS+FSEM E CPLDLTTCNIMIDVYGQL M KEADRLFW
Sbjct: 303 ALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFW 343
Score = 112 bits (279), Expect = 1e-22
Identities = 64/203 (31%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Frame = +1
Query: 25 LDWI--IEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITH 198
L W+ +E+ + + Y+ +I + + A +F ++ I+PD Y+++I
Sbjct: 199 LFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINV 258
Query: 199 FGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPD 378
FGK LF A LQ+M ++ V D V YS L+ + + + +A+S+FS + A D
Sbjct: 259 FGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLD 318
Query: 379 LVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFS 558
L N MI+V+G+ + +EA +L MR+ G+ P+ +SY+TLL +Y E F EA+ +F
Sbjct: 319 LTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFR 378
Query: 559 EMKEVHCPLDLTTCNIMIDVYGQ 627
M+ ++ T N MI++YG+
Sbjct: 379 LMQSKDVQQNVVTYNTMINIYGK 401
Score = 96.7 bits (239), Expect = 6e-18
Identities = 58/220 (26%), Positives = 117/220 (53%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++++ + + ++ P + AYN +I +AK + AR L EMR A+ PD +Y
Sbjct: 229 DYSKAISIFSRL-KASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSY 287
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL+ + F AL+ +M E + DL + +I++ +L +A +F ++
Sbjct: 288 STLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRK 347
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI P++++YN+++ V+G+A LF EA L M+ + + V+Y+T++ +Y + +
Sbjct: 348 MGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEK 407
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM + + T + +I ++ + + A LF
Sbjct: 408 ATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILF 447
Score = 81.6 bits (200), Expect = 2e-13
Identities = 49/201 (24%), Positives = 98/201 (48%)
Frame = +1
Query: 25 LDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFG 204
L W + + +P+V +YN ++R A + A LF M+ + + + TY+T+I +G
Sbjct: 341 LFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYG 400
Query: 205 KEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLV 384
K + A +Q+M + + + + YS +I + K +A +F +L+ +G+ D V
Sbjct: 401 KTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEV 460
Query: 385 AYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEM 564
Y +MI + + L A++LL E++ PD + T + + R EA +F +
Sbjct: 461 LYQTMIVAYERTGLVAHAKRLLHELK----RPDNIPRDTAIAILARAGRIEEATWVFRQA 516
Query: 565 KEVHCPLDLTTCNIMIDVYGQ 627
+ D++ MI+++ +
Sbjct: 517 FDAREVKDISVFGCMINLFSK 537
Score = 72.4 bits (176), Expect = 1e-10
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ + +V YN +I + + + A L EM +R I P+ TYST+I+ + K G
Sbjct: 379 LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAG 438
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLI-----------------ELSRK---LRDYSKA 333
D A Q++ V D VLY +I EL R RD + A
Sbjct: 439 KLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIA 498
Query: 334 IS-----------IFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNP 480
I +F + A D+ + MIN+F K K + ++ +MRE G P
Sbjct: 499 ILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFP 558
Query: 481 DTVSYSTLLTMYVENRRFVEALSIFSEMKEVHCPLDLTTCNIMIDVYG 624
D+ + +L + + R F +A +++ +M E C M+ +YG
Sbjct: 559 DSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYG 606
>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 672
Score = 356 bits (913), Expect = 4e-96
Identities = 173/221 (78%), Positives = 196/221 (88%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
DW+RSLA+LDWI + A Y PSVFAYNV++RNVLRA QWDLA GLFDEMR RA++PDR+TY
Sbjct: 131 DWRRSLAILDWINDVALYTPSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTY 190
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STLIT FGK G+FD+AL+WLQ+ME+DRV+GDLVLYSNLIELSRKL DY+KAI+IFSRLK
Sbjct: 191 STLITAFGKAGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKR 250
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
GI PDLVA+NSMINVFGKAKLFREAR LL EMR G+ PDTVSYSTLLTMYVEN +F+E
Sbjct: 251 MGIVPDLVAFNSMINVFGKAKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLE 310
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLFW 663
AL +F EM EV C LD+TTCN+MIDVYGQLDM KEADRLFW
Sbjct: 311 ALGVFREMSEVKCGLDITTCNVMIDVYGQLDMAKEADRLFW 351
Score = 96.7 bits (239), Expect = 6e-18
Identities = 59/220 (26%), Positives = 120/220 (54%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D+ +++A+ + + P + A+N +I +AK + ARGL EMR ++PD +Y
Sbjct: 237 DYTKAIAIFSRL-KRMGIVPDLVAFNSMINVFGKAKLFREARGLLKEMRAVGVAPDTVSY 295
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
STL+T + + F AL ++M E + D+ + +I++ +L +A +F ++
Sbjct: 296 STLLTMYVENEKFLEALGVFREMSEVKCGLDITTCNVMIDVYGQLDMAKEADRLFWSMRK 355
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
I P++V+YN+++ V+G A+LF EA L M+ + + V+Y+T++ +Y ++ +
Sbjct: 356 MVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQNVVTYNTMIRIYGKSLEHEK 415
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
A ++ EM++ + T + +I ++G+ + A LF
Sbjct: 416 ATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLF 455
Score = 84.3 bits (207), Expect = 3e-14
Identities = 53/209 (25%), Positives = 103/209 (49%)
Frame = +1
Query: 1 DWQRSLALLDWIIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTY 180
D + L W + + EP+V +YN ++R A+ + A LF M++ + + TY
Sbjct: 341 DMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQNVVTY 400
Query: 181 STLITHFGKEGLFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKG 360
+T+I +GK + A +Q+M++ + + + YS +I + + +A +F +L+
Sbjct: 401 NTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLFQKLRN 460
Query: 361 AGITPDLVAYNSMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVE 540
+G+ D V Y +MI + + L A++LL E++ PD + T +T+ R E
Sbjct: 461 SGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELK----RPDNIPRETAITILARAGRVEE 516
Query: 541 ALSIFSEMKEVHCPLDLTTCNIMIDVYGQ 627
A +F + E D++ MI++Y +
Sbjct: 517 ATWVFRQAFEAGQVKDISVFGCMIELYSR 545
Score = 84.3 bits (207), Expect = 3e-14
Identities = 52/209 (24%), Positives = 99/209 (47%)
Frame = +1
Query: 34 IIEEASYEPSVFAYNVIIRNVLRAKQWDLARGLFDEMRQRAISPDRFTYSTLITHFGKEG 213
+++ E +V YN +IR ++ + + A L EM++R I P+ TYST+I+ +G+ G
Sbjct: 387 MMQRMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAG 446
Query: 214 LFDSALAWLQQMEEDRVTGDLVLYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYN 393
D A Q++ V D VLY +I ++ + A + LK PD +
Sbjct: 447 KLDRAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELK----RPDNIPRE 502
Query: 394 SMINVFGKAKLFREARQLLLEMREAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMKEV 573
+ I + +A EA + + EAG D + ++ +Y NR++ + +F M+
Sbjct: 503 TAITILARAGRVEEATWVFRQAFEAGQVKDISVFGCMIELYSRNRKYANCIEVFENMRVA 562
Query: 574 HCPLDLTTCNIMIDVYGQLDMVKEADRLF 660
++++ YG+L ++AD ++
Sbjct: 563 GYFPASHVIGLVLNAYGKLREFEKADAVY 591
Score = 77.0 bits (188), Expect = 5e-12
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +1
Query: 109 QWDLARG---LFDEMRQRAISPDRFTYSTLITHFGKEGLFDSALAWLQQMEEDRVTGDLV 279
Q D+A+ LF MR+ I P+ +Y+TL+ +G LF A+ + M+ V ++V
Sbjct: 339 QLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQNVV 398
Query: 280 LYSNLIELSRKLRDYSKAISIFSRLKGAGITPDLVAYNSMINVFGKAKLFREARQLLLEM 459
Y+ +I + K ++ KA ++ ++ GI P+ + Y+++I+++G+A A L ++
Sbjct: 399 TYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLFQKL 458
Query: 460 REAGLNPDTVSYSTLLTMYVENRRFVEALSIFSEMK 567
R +G+ D V Y T++ Y A + E+K
Sbjct: 459 RNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELK 494