BLASTX nr result

ID: Cocculus23_contig00046717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00046717
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007039780.1| Integrase-type DNA-binding superfamily prote...    58   2e-06
ref|XP_007215988.1| hypothetical protein PRUPE_ppa011735mg [Prun...    55   8e-06

>ref|XP_007039780.1| Integrase-type DNA-binding superfamily protein, putative [Theobroma
           cacao] gi|508777025|gb|EOY24281.1| Integrase-type
           DNA-binding superfamily protein, putative [Theobroma
           cacao]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/49 (51%), Positives = 37/49 (75%)
 Frame = +2

Query: 164 TQRTTKKGSVKVDKMIENAHDIKKRKENGGAEGKHPVYRGVRMRNWGKW 310
           ++ +T+  S KV+K ++NA++ K++ +N   EGKHP YRGVRMR WGKW
Sbjct: 24  SESSTRFKSKKVEK-VKNANESKRKVKNDEVEGKHPTYRGVRMRQWGKW 71


>ref|XP_007215988.1| hypothetical protein PRUPE_ppa011735mg [Prunus persica]
           gi|462412138|gb|EMJ17187.1| hypothetical protein
           PRUPE_ppa011735mg [Prunus persica]
          Length = 198

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 116 SKASSDLNNHNIPSPQTQRTTKKGSVKVDKMIENAHDIK-KRKENGGAEGKHPVYRGVRM 292
           S +SS L   +  SP     TK  + K     +  H +  KRK +  +  KHPVYRGVRM
Sbjct: 17  SSSSSRLLQTHPTSPSNSLKTKTKTHKASSQHQQQHQVALKRKRDDNSSSKHPVYRGVRM 76

Query: 293 RNWGKW 310
           R+WGKW
Sbjct: 77  RSWGKW 82


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