BLASTX nr result
ID: Cocculus23_contig00046530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00046530
(361 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana] 76 6e-12
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 75 7e-12
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 69 5e-10
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 66 4e-09
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu] 65 8e-09
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 65 1e-08
gb|ABA27027.1| TO70-3 [Taraxacum officinale] 64 2e-08
gb|AAY99339.1| pol-polyprotein [Silene latifolia] 62 1e-07
emb|CAN82529.1| hypothetical protein VITISV_028061 [Vitis vinifera] 61 2e-07
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 61 2e-07
gb|AAX96029.1| retrotransposon protein, putative, unclassified [... 60 3e-07
emb|CAN61771.1| hypothetical protein VITISV_041899 [Vitis vinifera] 60 4e-07
gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Ja... 59 5e-07
ref|XP_006596919.1| PREDICTED: uncharacterized protein LOC100804... 59 7e-07
ref|XP_003551524.1| PREDICTED: uncharacterized protein LOC100805... 59 7e-07
ref|XP_003530705.1| PREDICTED: uncharacterized protein LOC100812... 59 7e-07
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 59 7e-07
emb|CAN74048.1| hypothetical protein VITISV_017189 [Vitis vinifera] 59 7e-07
ref|XP_004506193.1| PREDICTED: uncharacterized protein LOC101494... 59 9e-07
ref|XP_004490487.1| PREDICTED: uncharacterized protein LOC101489... 59 9e-07
>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +3
Query: 21 KVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYKLND 200
++ + ++ + R R H GD VL+KV NT +P G LG N EG Y +++ ++PE Y+L D
Sbjct: 676 EMARHYNSNVRQRRFHEGDRVLQKVFQNTAEPNTGKLGTNWEGPYLISKIVRPEVYELAD 735
Query: 201 TTGRQLPRS*NVEHLKKYY 257
+G+ +PRS N HL+KYY
Sbjct: 736 LSGKAVPRSWNAMHLRKYY 754
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
+A+ Q++V + ++++ R R GD VL++V NT++P G LGP EG Y+V P
Sbjct: 1781 VAQCQQRVMRYYNKNVRVRQFRAGDWVLRRVNQNTRNPNHGALGPKWEGPYRVIRATGPG 1840
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
YKL GR + RS N EHLKKY+
Sbjct: 1841 AYKLAYQDGRDVKRSWNAEHLKKYF 1865
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
I YQ K +++ R VGD VL+KV NT + G LG N EGSYQV++ ++P
Sbjct: 1753 IQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPG 1812
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
Y+L +G +PR+ N HLK+YY
Sbjct: 1813 DYELLTMSGTAVPRTWNSMHLKRYY 1837
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
+ YQ+K+K+ +D+ + R + GD VL+KV+ ++P G LG N EG Y++T
Sbjct: 1021 MGSYQQKLKQAYDKGVKSRPLVPGDLVLRKVVGTARNPAWGKLGTNWEGPYRITSVAGIG 1080
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
Y+L D GR + R NV +L++YY
Sbjct: 1081 AYRLEDLDGRVVHRPWNVNNLRRYY 1105
>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
Length = 1542
Score = 65.5 bits (158), Expect = 8e-09
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +3
Query: 39 DRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYKLNDTTGRQL 218
+++ R R D VL KV NT+DP G LGP EG Y+V P YKL GR +
Sbjct: 1469 NKNLRVRQFRARDWVLGKVNQNTRDPNHGALGPKWEGPYRVIRATGPGAYKLAYPDGRDV 1528
Query: 219 PRS*NVEHLKKYY 257
RS N EHLKKY+
Sbjct: 1529 KRSRNAEHLKKYF 1541
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +3
Query: 39 DRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYKLNDTTGRQL 218
D S + GD VL+KV NT++P G LGP EG Y+V P YKL GR +
Sbjct: 1016 DGSCSEQGSGAGDWVLRKVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKLACQDGRDV 1075
Query: 219 PRS*NVEHLKKYY 257
RS N EHLKKY+
Sbjct: 1076 KRSWNAEHLKKYF 1088
>gb|ABA27027.1| TO70-3 [Taraxacum officinale]
Length = 97
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
IA +Q+++ ++++ R R +GD VL+K NTKDP G L P EG Y + K
Sbjct: 17 IAAHQQRIANSYNKNIRIRRFQIGDLVLRKTFQNTKDPADGKLAPKWEGPYVINSKAGKG 76
Query: 183 TYKLNDTTGRQLPRS*NVEHL 245
Y L D G LPRS N HL
Sbjct: 77 VYWLADMEGTLLPRSWNAIHL 97
>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
Length = 1307
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
+A YQ ++++ ++ R + VGD VL+K K G + N EG Y+V E+++P
Sbjct: 1222 LAVYQNRMRRAYNHRVHKRDLRVGDLVLRKSTATNKGNIHGKMTTNWEGPYKVVEEMRPG 1281
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYYL 260
TY+L D G L N ++L+KY++
Sbjct: 1282 TYRLTDMEGVPLMSHWNTDNLRKYFI 1307
>emb|CAN82529.1| hypothetical protein VITISV_028061 [Vitis vinifera]
Length = 936
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
+A+YQ++ ++R RPRS G VL+KVL NT + G N EG Y V++ E
Sbjct: 851 MADYQQRASAHYNRKVRPRSFKNGTLVLRKVLENTTEVGAGKFQANWEGPYIVSKASNNE 910
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
Y L G L R NV +LK+YY
Sbjct: 911 AYHLQKLDGTPLLRPWNVSNLKQYY 935
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
I YQ+ K +++ + R GD VL+KV NT + G LG + EG Y +++ +KP
Sbjct: 1702 IQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPG 1761
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
Y+L G +PRS N +LK+YY
Sbjct: 1762 VYELLTMDGTPIPRSWNSANLKRYY 1786
>gb|AAX96029.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77549917|gb|ABA92714.1| transposon
protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1058
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/85 (31%), Positives = 51/85 (60%)
Frame = +3
Query: 6 AEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPET 185
A YQ+ +++ +++ + R++ +GD VL++V L P EG Y +T+ L+P
Sbjct: 970 ASYQQALRRYYEKRIKARTLSIGDYVLRRV---QSQAGHNKLSPKWEGPYMITQVLRPGA 1026
Query: 186 YKLNDTTGRQLPRS*NVEHLKKYYL 260
+K+ D GR+L S N++ L+K+Y+
Sbjct: 1027 FKIADVDGRELANSWNIDQLRKFYV 1051
>emb|CAN61771.1| hypothetical protein VITISV_041899 [Vitis vinifera]
Length = 852
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
+A+YQ++ +DR RPRS+ G VL+KV NT + G N EG Y V++ +
Sbjct: 767 MADYQQRASAHYDRRVRPRSLKNGTLVLRKVFENTAEVGAGKFQANWEGPYIVSKASESG 826
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
Y L G L R NV +LK+YY
Sbjct: 827 AYHLQKLDGTPLLRPWNVSNLKQYY 851
>gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 2079
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = +3
Query: 6 AEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPET 185
A YQ+ +++ ++ R R + +GD VL++V + L P EG Y +T+ L+P
Sbjct: 1998 ASYQQALRRYHEKRIRARILSIGDYVLRRVQTQAG---RNKLSPKWEGPYTITQALRPGA 2054
Query: 186 YKLNDTTGRQLPRS*NVEHLKKYYL 260
YK+ D GR+L S N++ L+K+Y+
Sbjct: 2055 YKIADGDGRELANSWNIDQLRKFYV 2079
>ref|XP_006596919.1| PREDICTED: uncharacterized protein LOC100804218 [Glycine max]
Length = 1799
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 12 YQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYK 191
YQ+++K+ FD+ RPR GD VLKKVL D ++G PN EG Y V
Sbjct: 1718 YQQRMKQAFDKKVRPRVFQEGDLVLKKVLSFQPD-SRGKWTPNYEGPYVVKRTFSGGALT 1776
Query: 192 LNDTTGRQLPRS*NVEHLKKYYL 260
L G +LPR NV+ +KKY++
Sbjct: 1777 LTTMDGDELPRPVNVDAVKKYFV 1799
>ref|XP_003551524.1| PREDICTED: uncharacterized protein LOC100805548 [Glycine max]
Length = 2323
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 12 YQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYK 191
YQ+++K+ FD+ RPR GD VLKKVL D ++G PN EG Y V
Sbjct: 2242 YQQRMKQAFDKKVRPRVFQEGDLVLKKVLSFQPD-SRGKWTPNYEGPYVVKRTFSGGALT 2300
Query: 192 LNDTTGRQLPRS*NVEHLKKYYL 260
L G +LPR NV+ +KKY++
Sbjct: 2301 LTTMDGDELPRPVNVDAVKKYFV 2323
>ref|XP_003530705.1| PREDICTED: uncharacterized protein LOC100812971 [Glycine max]
Length = 2270
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 12 YQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYK 191
YQ+++K+ FD+ RPR GD VLKKVL D ++G PN EG Y V
Sbjct: 2189 YQQRMKQAFDKKVRPRVFQEGDLVLKKVLSFQPD-SRGKWTPNYEGPYVVKRTFSGGALT 2247
Query: 192 LNDTTGRQLPRS*NVEHLKKYYL 260
L G +LPR NV+ +KKY++
Sbjct: 2248 LTTMDGDELPRPVNVDAVKKYFV 2270
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
I YQ+ + ++ + R VGD VL++V N K+ G LG N EG Y +TE ++
Sbjct: 1018 IQNYQQAAARYYNSKVKSRPFFVGDYVLRRVFDNKKEEGAGKLGINWEGPYIITEVVRNG 1077
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYYL 260
Y+L D + R NV +LKK+Y+
Sbjct: 1078 VYRLKDLEDNPVKRPWNVINLKKFYV 1103
>emb|CAN74048.1| hypothetical protein VITISV_017189 [Vitis vinifera]
Length = 887
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +3
Query: 3 IAEYQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPE 182
+A+YQ++ ++R RPRS G VL+KV NT + G N EG Y V++ +
Sbjct: 802 MADYQQRASAHYNRKARPRSFKNGTLVLRKVFENTAEVGVGKFQANWEGPYIVSKASESG 861
Query: 183 TYKLNDTTGRQLPRS*NVEHLKKYY 257
TY L G L R NV +LK+YY
Sbjct: 862 TYHLQKLDGTPLLRPWNVSNLKQYY 886
>ref|XP_004506193.1| PREDICTED: uncharacterized protein LOC101494924 [Cicer arietinum]
Length = 2008
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +3
Query: 12 YQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYK 191
YQ+++KK +++ RPR G+ VLKK+LP KD ++G PN EG Y V +
Sbjct: 1927 YQKRLKKAYEKKVRPREFREGELVLKKILPIKKD-SRGKWTPNYEGPYVVKKAFSGGALI 1985
Query: 192 LNDTTGRQLPRS*NVEHLKKYY 257
L + G +LP N + +KKYY
Sbjct: 1986 LAEMDGDELPLPVNSDAVKKYY 2007
>ref|XP_004490487.1| PREDICTED: uncharacterized protein LOC101489483 [Cicer arietinum]
Length = 973
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +3
Query: 12 YQRKVKKRFDRSTRPRSIHVGDGVLKKVLPNTKDPTQGILGPN*EGSYQVTEKLKPETYK 191
YQ+++KK +++ RPR G+ VLKK+LP KD ++G PN EG Y V +
Sbjct: 892 YQKRLKKAYEKKVRPREFREGELVLKKILPIKKD-SRGKWTPNYEGPYVVKKAFSGGALI 950
Query: 192 LNDTTGRQLPRS*NVEHLKKYY 257
L + G +LP N + +KKYY
Sbjct: 951 LAEMDGDELPLPVNSDAVKKYY 972