BLASTX nr result

ID: Cocculus23_contig00045964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00045964
         (512 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006388711.1| hypothetical protein POPTR_0115s00270g [Popu...    55   8e-06

>ref|XP_006388711.1| hypothetical protein POPTR_0115s00270g [Populus trichocarpa]
            gi|550310693|gb|ERP47625.1| hypothetical protein
            POPTR_0115s00270g [Populus trichocarpa]
          Length = 1064

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 48/130 (36%), Positives = 68/130 (52%)
 Frame = +1

Query: 115  PALEELVIWDCPKLNIGFGAPTPSYPSLKSLWISGGEMNNNLDYLVTNRLLTSVTYLHIE 294
            P L EL + DCP LN       P  PS+KS+ I GG+ +     L + R LTS+T LHIE
Sbjct: 840  PRLRELRVGDCPVLN-----EIPIIPSVKSVHIRGGKDS----LLRSVRNLTSITSLHIE 890

Query: 295  GVSELKELPVEFMPNSNEDRQDLYIWRCPMFQGFLPCSSTSDDEMKQVLINTSSTVRKID 474
            G+  ++ELP  F+ N +   + L IW      G     S S+    +VL N S+ ++ ++
Sbjct: 891  GIRNVRELPDGFLQN-HTLLESLDIW------GMRDLESLSN----RVLDNLSA-LKSLE 938

Query: 475  INQCHSLLSL 504
            I  C  L SL
Sbjct: 939  IFYCGKLESL 948


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