BLASTX nr result

ID: Cocculus23_contig00045924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00045924
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006296495.1| hypothetical protein CARUB_v10025686mg, part...    59   5e-07
ref|XP_006375178.1| hypothetical protein POPTR_0014s05000g [Popu...    59   9e-07
ref|XP_006397653.1| hypothetical protein EUTSA_v10001799mg [Eutr...    58   1e-06
ref|XP_007052375.1| Ankyrin repeat family protein [Theobroma cac...    58   2e-06

>ref|XP_006296495.1| hypothetical protein CARUB_v10025686mg, partial [Capsella rubella]
           gi|482565203|gb|EOA29393.1| hypothetical protein
           CARUB_v10025686mg, partial [Capsella rubella]
          Length = 432

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/53 (45%), Positives = 37/53 (69%)
 Frame = +2

Query: 29  YSLLLIFNTTGFLTSIVIISLLTSRFPLKPWLRLAVVALMTTYASALCFIAPN 187
           ++L   FN  GF TS+ +ISLLT  FPL+ W+RL +++++  Y  A+ +IAPN
Sbjct: 363 FTLYAAFNAVGFFTSVTMISLLTKGFPLRNWIRLCIISIVAIYLLAIVYIAPN 415


>ref|XP_006375178.1| hypothetical protein POPTR_0014s05000g [Populus trichocarpa]
           gi|550323497|gb|ERP52975.1| hypothetical protein
           POPTR_0014s05000g [Populus trichocarpa]
          Length = 459

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/84 (34%), Positives = 50/84 (59%)
 Frame = +2

Query: 2   APITSHLSCYSLLLIFNTTGFLTSIVIISLLTSRFPLKPWLRLAVVALMTTYASALCFIA 181
           A +T     +++  +FN  GF  SI +ISLLTS FPL+  LRLA++++  TY  A+ +++
Sbjct: 348 AVMTGDPEVFAVFTVFNAVGFFASIAMISLLTSGFPLRAGLRLAILSMTATYVIAVIYMS 407

Query: 182 PNNLRSAGHLLHTKDFQMLAFFLR 253
           P   ++   ++ +    +LA F R
Sbjct: 408 PTERKTIDAVVWSVGLLVLAEFAR 431


>ref|XP_006397653.1| hypothetical protein EUTSA_v10001799mg [Eutrema salsugineum]
           gi|557098726|gb|ESQ39106.1| hypothetical protein
           EUTSA_v10001799mg [Eutrema salsugineum]
          Length = 449

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/53 (45%), Positives = 38/53 (71%)
 Frame = +2

Query: 29  YSLLLIFNTTGFLTSIVIISLLTSRFPLKPWLRLAVVALMTTYASALCFIAPN 187
           ++L   FN  GFL S+ +ISLLT  FPL+ W+RL +++++ TY  A+ +IAP+
Sbjct: 355 FTLYASFNAIGFLASVTMISLLTKGFPLRNWMRLCIISIVATYLIAIFYIAPD 407


>ref|XP_007052375.1| Ankyrin repeat family protein [Theobroma cacao]
           gi|508704636|gb|EOX96532.1| Ankyrin repeat family
           protein [Theobroma cacao]
          Length = 472

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 40/55 (72%)
 Frame = +2

Query: 29  YSLLLIFNTTGFLTSIVIISLLTSRFPLKPWLRLAVVALMTTYASALCFIAPNNL 193
           +S+L++FNT GF+ S+ +I LLTS FPL+  LRLA+ +++ TY  A+ +I P  +
Sbjct: 379 FSVLIVFNTIGFIASVAMIFLLTSGFPLRAGLRLAMFSMIGTYVVAISYIGPTKM 433


Top