BLASTX nr result

ID: Cocculus23_contig00045895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00045895
         (254 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...    55   8e-06
emb|CBI28441.3| unnamed protein product [Vitis vinifera]               55   8e-06
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]    55   8e-06

>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%)
 Frame = +2

Query: 5   VSPISIPQALKVAVFNLQTSSSELISGHHINNFCSDSINPTVNTYEILLRRYERSCTSEE 184
           ++P    ++L+  V + +TS+S           C+ ++  +  T+E L+ RY+ SC SEE
Sbjct: 40  LNPNQCTKSLQDLVDHYKTSTSH----------CNTTLFSSSETFESLINRYQGSCCSEE 89

Query: 185 AKRFHLNIIKCGFDGNLFLSN 247
           A+  HL  IK GF GNLFLSN
Sbjct: 90  ARELHLQSIKYGFVGNLFLSN 110


>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%)
 Frame = +2

Query: 5   VSPISIPQALKVAVFNLQTSSSELISGHHINNFCSDSINPTVNTYEILLRRYERSCTSEE 184
           ++P    ++L+  V + +TS+S           C+ ++  +  T+E L+ RY+ SC SEE
Sbjct: 68  LNPNQCTKSLQDLVDHYKTSTSH----------CNTTLFSSSETFESLINRYQGSCCSEE 117

Query: 185 AKRFHLNIIKCGFDGNLFLSN 247
           A+  HL  IK GF GNLFLSN
Sbjct: 118 ARELHLQSIKYGFVGNLFLSN 138


>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%)
 Frame = +2

Query: 5   VSPISIPQALKVAVFNLQTSSSELISGHHINNFCSDSINPTVNTYEILLRRYERSCTSEE 184
           ++P    ++L+  V + +TS+S           C+ ++  +  T+E L+ RY+ SC SEE
Sbjct: 513 LNPNQCTKSLQDLVDHYKTSTSH----------CNTTLFSSSETFESLINRYQGSCCSEE 562

Query: 185 AKRFHLNIIKCGFDGNLFLSN 247
           A+  HL  IK GF GNLFLSN
Sbjct: 563 ARELHLQSIKYGFVGNLFLSN 583


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