BLASTX nr result
ID: Cocculus23_contig00045798
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00045798
(770 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containi... 110 6e-22
ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi... 110 6e-22
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi... 101 3e-19
emb|CBI32673.3| unnamed protein product [Vitis vinifera] 101 3e-19
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera] 101 3e-19
ref|XP_002533004.1| pentatricopeptide repeat-containing protein,... 100 6e-19
ref|XP_006345661.1| PREDICTED: pentatricopeptide repeat-containi... 99 2e-18
ref|XP_006480733.1| PREDICTED: pentatricopeptide repeat-containi... 95 3e-17
ref|XP_007207771.1| hypothetical protein PRUPE_ppa026403mg, part... 94 5e-17
ref|XP_004305224.1| PREDICTED: pentatricopeptide repeat-containi... 93 1e-16
ref|XP_006429006.1| hypothetical protein CICLE_v10013887mg, part... 91 5e-16
ref|XP_003549029.2| PREDICTED: pentatricopeptide repeat-containi... 90 8e-16
gb|EYU41678.1| hypothetical protein MIMGU_mgv1a022538mg, partial... 87 5e-15
ref|XP_007152193.1| hypothetical protein PHAVU_004G109300g [Phas... 87 9e-15
ref|XP_007027119.1| Pentatricopeptide repeat superfamily protein... 87 9e-15
ref|XP_004499783.1| PREDICTED: pentatricopeptide repeat-containi... 87 9e-15
ref|XP_006844282.1| hypothetical protein AMTR_s00145p00084930 [A... 80 1e-12
ref|XP_003564579.1| PREDICTED: pentatricopeptide repeat-containi... 78 3e-12
gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indi... 78 4e-12
ref|NP_001044753.1| Os01g0839400 [Oryza sativa Japonica Group] g... 78 4e-12
>ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 110 bits (275), Expect = 6e-22
Identities = 56/99 (56%), Positives = 66/99 (66%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I LDPGDVSSYVM+SNA SAAGKW SVS++ RIPGCSWIEIR+K
Sbjct: 417 ELAAQRILALDPGDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSK 476
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAE 474
VH FVTGDKNH + +EHLKE NF+++
Sbjct: 477 VHVFVTGDKNHHQKDEIYSALKFFVEHLKEREDFNFLSD 515
>ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 110 bits (275), Expect = 6e-22
Identities = 56/99 (56%), Positives = 66/99 (66%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I LDPGDVSSYVM+SNA SAAGKW SVS++ RIPGCSWIEIR+K
Sbjct: 417 ELAAQRILALDPGDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSK 476
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAE 474
VH FVTGDKNH + +EHLKE NF+++
Sbjct: 477 VHVFVTGDKNHHQKDEIYSALKFFVEHLKEREDFNFLSD 515
>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 101 bits (252), Expect = 3e-19
Identities = 50/90 (55%), Positives = 60/90 (66%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I LDP DVSSYVMLSNA SAAG+WQSVS+I +PG SWIEIR+K
Sbjct: 432 ELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSK 491
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKE 501
VH FVTGD+NH +C++HL+E
Sbjct: 492 VHIFVTGDRNHDQHDEIYQVLGFCIQHLRE 521
>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 101 bits (252), Expect = 3e-19
Identities = 50/90 (55%), Positives = 60/90 (66%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I LDP DVSSYVMLSNA SAAG+WQSVS+I +PG SWIEIR+K
Sbjct: 713 ELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSK 772
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKE 501
VH FVTGD+NH +C++HL+E
Sbjct: 773 VHIFVTGDRNHDQHDEIYQVLGFCIQHLRE 802
>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 101 bits (252), Expect = 3e-19
Identities = 50/90 (55%), Positives = 60/90 (66%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I LDP DVSSYVMLSNA SAAG+WQSVS+I +PG SWIEIR+K
Sbjct: 689 ELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSK 748
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKE 501
VH FVTGD+NH +C++HL+E
Sbjct: 749 VHIFVTGDRNHDQHDEIYQVLGFCIQHLRE 778
>ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527215|gb|EEF29379.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 100 bits (249), Expect = 6e-19
Identities = 50/100 (50%), Positives = 61/100 (61%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
++AA I LDP DVSSYVMLSNA SAAG+WQ VS I RIPGCSWIE+R+K
Sbjct: 420 DLAAQKILALDPEDVSSYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWIEVRSK 479
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAEY 471
+H F+ DKNH +C+E L+E+ F EY
Sbjct: 480 IHVFLNSDKNHHQKEEIYSFLKFCVEQLREIEGITFSIEY 519
>ref|XP_006345661.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Solanum tuberosum]
Length = 506
Score = 98.6 bits (244), Expect = 2e-18
Identities = 47/100 (47%), Positives = 61/100 (61%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E AA + L+PGDVSSYVMLSNA SAAG+WQSVS++ +PGCSW+EI+ K
Sbjct: 407 EYAAEKVLALEPGDVSSYVMLSNAHSAAGRWQSVSIVRNEMRGKGLKTVPGCSWVEIKCK 466
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAEY 471
+H FVTGDK H Y L+H + +F+ E+
Sbjct: 467 IHVFVTGDKRHANKPEIYELLGYFLKHAMKSQETDFLREF 506
>ref|XP_006480733.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Citrus sinensis]
Length = 521
Score = 94.7 bits (234), Expect = 3e-17
Identities = 48/90 (53%), Positives = 55/90 (61%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E AA I LDP DVSSYVMLSNA S AGKW +VS I R+PGCSWIEI++K
Sbjct: 429 EFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSK 488
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKE 501
VH FVTGD+NH C E ++E
Sbjct: 489 VHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
>ref|XP_007207771.1| hypothetical protein PRUPE_ppa026403mg, partial [Prunus persica]
gi|462403413|gb|EMJ08970.1| hypothetical protein
PRUPE_ppa026403mg, partial [Prunus persica]
Length = 451
Score = 94.0 bits (232), Expect = 5e-17
Identities = 47/71 (66%), Positives = 51/71 (71%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E AA I LDP DVSSYVMLSNA SAAG+WQSV+ I R+PGCSWIEIR +
Sbjct: 348 EFAARKILALDPEDVSSYVMLSNAHSAAGRWQSVATIRREMKEKGLKRVPGCSWIEIRNR 407
Query: 590 VHTFVTGDKNH 558
VH FVTGDKNH
Sbjct: 408 VHVFVTGDKNH 418
>ref|XP_004305224.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 507
Score = 92.8 bits (229), Expect = 1e-16
Identities = 46/71 (64%), Positives = 50/71 (70%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E AA I LDPGDVSSYVM+SNA SAAG+WQ+VS RIPGCSWIEIR+K
Sbjct: 417 EFAARKILALDPGDVSSYVMVSNAHSAAGRWQNVSTTRREMKDKGMKRIPGCSWIEIRSK 476
Query: 590 VHTFVTGDKNH 558
VH F T DKNH
Sbjct: 477 VHVFTTADKNH 487
>ref|XP_006429006.1| hypothetical protein CICLE_v10013887mg, partial [Citrus clementina]
gi|557531063|gb|ESR42246.1| hypothetical protein
CICLE_v10013887mg, partial [Citrus clementina]
Length = 436
Score = 90.9 bits (224), Expect = 5e-16
Identities = 45/71 (63%), Positives = 50/71 (70%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E AA I LDP DVSSYVMLSNA S AGKW +VS I R+PGCSWIEI++K
Sbjct: 343 EFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSK 402
Query: 590 VHTFVTGDKNH 558
VH FVTGD+NH
Sbjct: 403 VHVFVTGDRNH 413
>ref|XP_003549029.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Glycine max]
Length = 534
Score = 90.1 bits (222), Expect = 8e-16
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I LDP DVSSYVMLSNA SAAGKW V+ + RIPG SWIE+R +
Sbjct: 430 ELAARKILDLDPDDVSSYVMLSNAHSAAGKWSDVATVRTEMKEKGMKRIPGSSWIEVRGE 489
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAEY 471
VH F+TGD+NH + EHL+E ++ + Y
Sbjct: 490 VHAFLTGDQNHDKKDEIYLLLNFFFEHLRENEDSDLLNIY 529
>gb|EYU41678.1| hypothetical protein MIMGU_mgv1a022538mg, partial [Mimulus
guttatus]
Length = 423
Score = 87.4 bits (215), Expect = 5e-15
Identities = 47/96 (48%), Positives = 55/96 (57%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
EVA+ I LDP DVSSYVMLSNA SAAG+W VS + RIPG SW+EI +K
Sbjct: 328 EVASRRILELDPRDVSSYVMLSNAHSAAGRWGDVSNVRQNMKEKGLVRIPGSSWVEISSK 387
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANF 483
+H FVTGDK H L+H K +NF
Sbjct: 388 IHVFVTGDKRHCNKDEIYIALGNFLDHSKGGQDSNF 423
>ref|XP_007152193.1| hypothetical protein PHAVU_004G109300g [Phaseolus vulgaris]
gi|561025502|gb|ESW24187.1| hypothetical protein
PHAVU_004G109300g [Phaseolus vulgaris]
Length = 532
Score = 86.7 bits (213), Expect = 9e-15
Identities = 45/90 (50%), Positives = 53/90 (58%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA I +LDP DVSSYVMLSNA SAAGKW V+ + RIPG SWIE+R K
Sbjct: 428 ELAARKILSLDPEDVSSYVMLSNAHSAAGKWSDVATVRTEMKEKGMKRIPGSSWIEVRGK 487
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKE 501
H F+T D NH + EHL+E
Sbjct: 488 AHVFLTADHNHDRNYETNLLLHFFCEHLRE 517
>ref|XP_007027119.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508715724|gb|EOY07621.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 798
Score = 86.7 bits (213), Expect = 9e-15
Identities = 41/100 (41%), Positives = 60/100 (60%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E AA I LDP DVSSY+MLSNA AAG+W+ S + RIPGCSWIE+R +
Sbjct: 697 EFAAKKIMALDPEDVSSYIMLSNAHVAAGRWEIASTLRREMKEKQMKRIPGCSWIEVRNQ 756
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAEY 471
VH F++ D+ H +C++H ++ +++F+ E+
Sbjct: 757 VHVFLSRDRKHSQMDEIHRILRFCIQHSQDSEASSFLMEF 796
>ref|XP_004499783.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cicer arietinum]
Length = 537
Score = 86.7 bits (213), Expect = 9e-15
Identities = 46/100 (46%), Positives = 58/100 (58%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E+AA +I LDP DVSSYVMLSNA SAAG+W VS + RIPG SWIE+R K
Sbjct: 432 ELAARNILALDPDDVSSYVMLSNAYSAAGRWSDVSRLRTEMKEKGMQRIPGGSWIEVRGK 491
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCLEHLKELPSANFVAEY 471
VH F+T D +H EHL+E +++ + Y
Sbjct: 492 VHAFLTADWSHNKNDEIYVLLRIFFEHLRENENSDLLNNY 531
>ref|XP_006844282.1| hypothetical protein AMTR_s00145p00084930 [Amborella trichopoda]
gi|548846691|gb|ERN05957.1| hypothetical protein
AMTR_s00145p00084930 [Amborella trichopoda]
Length = 554
Score = 79.7 bits (195), Expect = 1e-12
Identities = 42/88 (47%), Positives = 47/88 (53%)
Frame = -1
Query: 764 AAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAKVH 585
AA + LDP DVSSYVMLSN + +WQ VS + RIPGCSWIEIR KVH
Sbjct: 451 AAQRLLDLDPEDVSSYVMLSNVFAVMDQWQDVSKVRRLMKNKGMKRIPGCSWIEIRDKVH 510
Query: 584 TFVTGDKNHXXXXXXXXXXXYCLEHLKE 501
FV GD+ H C LKE
Sbjct: 511 AFVNGDRRHPEIDEIYRALIECYLQLKE 538
>ref|XP_003564579.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Brachypodium distachyon]
Length = 456
Score = 78.2 bits (191), Expect = 3e-12
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -1
Query: 770 EVAAHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAK 591
E A IQ LDP D SSY++LSN SAAG WQSVS+I RI GCSWIE++
Sbjct: 362 ESVAERIQALDPKDTSSYILLSNVYSAAGSWQSVSMIRRQIKEKGLKRITGCSWIEVQND 421
Query: 590 VHTFVTGDKNHXXXXXXXXXXXYCL 516
VH F GD H CL
Sbjct: 422 VHVFFNGDSRHSQCDEIYMMLESCL 446
>gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indica Group]
Length = 456
Score = 77.8 bits (190), Expect = 4e-12
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = -1
Query: 761 AHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAKVHT 582
A HI LDP D SSY++LSN SAAG WQ VS+I RI GCSWIE++ +VH
Sbjct: 365 AKHIHALDPKDTSSYILLSNVYSAAGSWQDVSMIRREIKEKGLKRITGCSWIEVQNQVHV 424
Query: 581 FVTGDKNHXXXXXXXXXXXYCL 516
F GD+ H CL
Sbjct: 425 FFNGDRRHPKSDDIYMMLESCL 446
>ref|NP_001044753.1| Os01g0839400 [Oryza sativa Japonica Group]
gi|15623829|dbj|BAB67888.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|21104616|dbj|BAB93208.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113534284|dbj|BAF06667.1|
Os01g0839400 [Oryza sativa Japonica Group]
gi|125572581|gb|EAZ14096.1| hypothetical protein
OsJ_04019 [Oryza sativa Japonica Group]
Length = 456
Score = 77.8 bits (190), Expect = 4e-12
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = -1
Query: 761 AHHIQTLDPGDVSSYVMLSNASSAAGKWQSVSLIXXXXXXXXXXRIPGCSWIEIRAKVHT 582
A HI LDP D SSY++LSN SAAG WQ VS+I RI GCSWIE++ +VH
Sbjct: 365 AKHIHALDPKDTSSYILLSNVYSAAGSWQDVSMIRREIKEKGLKRITGCSWIEVQNQVHV 424
Query: 581 FVTGDKNHXXXXXXXXXXXYCL 516
F GD+ H CL
Sbjct: 425 FFNGDRRHPKSDDIYMMLESCL 446