BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00045633
         (315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          56   4e-06

>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +1

Query: 34  QGDPPIRSFAADGHLIYEAKVNGHFIWDVK-SGLCDEGCWCQYDIESNDE 180
           Q D PI  F +DG L+Y AK NGHF+WDV  SG CD  C C  D E +D+
Sbjct: 335 QEDLPITGFNSDGFLVYPAKQNGHFLWDVPGSGHCDPDCPCWDDWEEDDD 384