BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00044110
         (541 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...    89   7e-16
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          86   6e-15
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...    86   7e-15
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    85   1e-14
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          83   4e-14
ref|XP_006470136.1| PREDICTED: uncharacterized protein LOC102610...    69   7e-10

>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 59/172 (34%), Positives = 85/172 (49%)
 Frame = +3

Query: 3   PTIVQIPKQIPRQKLTTFTPNVWFTNYQRFQESQQHARTTTCPLLQSQKEGTVKITYELP 182
           P+IVQIP++I R++LT   P  W TNY++ Q+ ++  ++      +S  + TVK  ++ P
Sbjct: 250 PSIVQIPRRISREELTQLIPLEWITNYEKRQQDRRPIQSQEATFRRSSVDKTVKTIFKNP 309

Query: 183 DPARXXXXXXXXXXXXXXXIQPIGGQPLYHGKTHIHSFTPDGKNVYEAKVNDHFIWDVHS 362
           D                  I+P+    L      IH+ T DGK VY  K++ HFIWDV  
Sbjct: 310 DEGSSSSSQIFQTLM----IEPV----LEEDWCPIHAVTTDGKPVYTDKIDGHFIWDVDP 361

Query: 363 GLCDPDCHCQYESDDDFDHDTPALILRMVFQQSKPHRKILSQQRCKFYDPTQ 518
             CDPDC C +  DD+ D      I+R       P RK  ++ RCK   P Q
Sbjct: 362 TKCDPDCDC-WMHDDEMDE----YIIR-------PKRK--NKGRCKPPPPPQ 399


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
 Frame = +3

Query: 3   PTIVQIPKQIPRQKLTTFTPNVWFTNYQRFQESQQHARTTTCPLLQSQKEGTVKITYELP 182
           PTI+QIP+QIPR +L    P  W +NY++F  +    +T+   + + + +GTV++T++ P
Sbjct: 252 PTIIQIPRQIPRHELLQLMPLEWISNYEQFHNNTAPVQTSE-SMFERRPDGTVRMTFKPP 310

Query: 183 DPARXXXXXXXXXXXXXXXIQPIGGQPLYHGKTHIHSFTPDGKNVYEAKVNDHFIWDV-H 359
             A                      + L      I  F  DG  VY AK N HF+WDV  
Sbjct: 311 PSAPQEPPQLSFTYSSMITAVQTAQEDL-----PITGFNSDGFLVYPAKQNGHFLWDVPG 365

Query: 360 SGLCDPDCHC--QYESDDDF 413
           SG CDPDC C   +E DDD+
Sbjct: 366 SGHCDPDCPCWDDWEEDDDY 385


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 58/172 (33%), Positives = 84/172 (48%)
 Frame = +3

Query: 3   PTIVQIPKQIPRQKLTTFTPNVWFTNYQRFQESQQHARTTTCPLLQSQKEGTVKITYELP 182
           P+IVQI ++I R++LT   P  W TNY++ Q+ ++  ++      +S  + TVK  ++ P
Sbjct: 250 PSIVQIHRKISREELTQLIPLEWITNYEKMQQDRRPIQSQEATFRRSSVDKTVKTIFKNP 309

Query: 183 DPARXXXXXXXXXXXXXXXIQPIGGQPLYHGKTHIHSFTPDGKNVYEAKVNDHFIWDVHS 362
           D                  IQP+    L      I++ T DGK VY  K++ HFIWDV  
Sbjct: 310 DEGSSSSSQIFQTLM----IQPV----LEEDWCPIYAVTTDGKPVYTDKIDGHFIWDVDP 361

Query: 363 GLCDPDCHCQYESDDDFDHDTPALILRMVFQQSKPHRKILSQQRCKFYDPTQ 518
             CDPDC C +  DD+ D      I+R       P RK  ++ RCK   P Q
Sbjct: 362 TKCDPDCDC-WMHDDEMDE----YIIR-------PKRK--NKGRCKPPPPPQ 399


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
           gi|565672276|gb|AHC13194.1| polyprotein [Citrus
           endogenous pararetrovirus]
          Length = 1812

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PTIVQIPKQIPRQKLTTFTPNVWFTNYQRFQESQQHARTTTCPLLQSQKEGTVKITYELP 182
           PTI+QIP+QIPR +L    P  W +NY++F  +    +T+   + + + +GTV++T++ P
Sbjct: 252 PTIIQIPRQIPRHELLKLMPLEWISNYEQFHNNTAPVQTSE-SMFERRPDGTVRMTFKPP 310

Query: 183 DPARXXXXXXXXXXXXXXXIQPIGGQPLYHGKTHIHSFTPDGKNVYEAKVNDHFIWDV-H 359
             A                      + L      I  FT +G  VY AK N HF+WDV  
Sbjct: 311 PSAPQEPPRLSFTYSSMITAVQTAQENL-----PITGFTSNGFPVYPAKQNGHFLWDVPG 365

Query: 360 SGLCDPDCHCQYESDDDFDHDTPALILRMVFQQSKPHRKILSQQRCKFYDPTQD 521
           SG CDPDC C  + ++D D+ T         ++ KP +K  +        P QD
Sbjct: 366 SGHCDPDCPCWDDWEEDNDYVTK--------KKKKPKKKSHASCHHSTSRPPQD 411


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   PTIVQIPKQIPRQKLTTFTPNVWFTNYQRFQESQQHARTTTCPLLQSQKEGTVKITYELP 182
           PTI+QIP+QIPR +L    P  W +NY++F  +    +T+   + + +++GTV++T++ P
Sbjct: 252 PTIIQIPRQIPRHELIKLMPLEWISNYEQFHNNTAPIQTSE-SMFERRQDGTVRMTFKPP 310

Query: 183 DPARXXXXXXXXXXXXXXXIQPIGGQPLYHGKTHIHSFTPDGKNVYEAKVNDHFIWDV-H 359
             A                      + L      I  F  +G  VY AK N HF+WD   
Sbjct: 311 PSAPQEPPRLSFTYSSMITAVQTAQEDL-----PITGFNSEGYPVYPAKHNGHFLWDAPG 365

Query: 360 SGLCDPDCHC--QYESDDDFDHDTPALILRMVFQQSKPHRKILSQQRCKFYDP 512
           SG+CDP C C   +E +DD+          +  ++ KP RK      C  YDP
Sbjct: 366 SGMCDPTCPCWDDWEEEDDY----------VPRRKRKPKRK-KPPVSCHHYDP 407


>ref|XP_006470136.1| PREDICTED: uncharacterized protein LOC102610034 [Citrus sinensis]
          Length = 477

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   PTIVQIPKQIPRQKLTTFTPNVWFTNYQRFQESQQHARTTTCPLLQSQKEGTVKITYELP 182
           PTI+QIP QIP+Q+L    P  W +NY++F ++ +  +T+     Q   +GT+ +T++ P
Sbjct: 332 PTIIQIPSQIPQQELIKLMPLEWLSNYEQFHQNSEPIQTSESH-FQKNSDGTIHLTFKPP 390

Query: 183 DPARXXXXXXXXXXXXXXXIQPIGGQPLYHGKTHIHSFTPDGKNVYEAKVNDHFIWDV-H 359
             +                      +P       I +F   G  +Y  K++ HF+WDV  
Sbjct: 391 PSS--------------------SSEPPRTKNLPIQAFNDQGFPIYLVKLHGHFLWDVPA 430

Query: 360 SGLCDP--DCHCQYESDDD 410
           SG CD    C    E DDD
Sbjct: 431 SGNCDACYPCWEDIEEDDD 449