BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00043650
         (643 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam...   323   3e-86
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   322   5e-86
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     320   2e-85
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              318   7e-85
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   318   7e-85
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part...   317   2e-84
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   316   3e-84
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   316   3e-84
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   314   1e-83
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi...   311   1e-82
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   306   3e-81
gb|EXB37231.1| hypothetical protein L484_020290 [Morus notabilis]     303   3e-80
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phas...   299   6e-79
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   293   4e-77
ref|XP_006304700.1| hypothetical protein CARUB_v10011958mg [Caps...   288   1e-75
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   288   1e-75

>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508704486|gb|EOX96382.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 724

 Score =  323 bits (828), Expect = 3e-86
 Identities = 160/215 (74%), Positives = 189/215 (87%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LG+ RNLNAARNLL SIEK+S GSVKL+D+FFNSL+RSYG+AGL QESIKVF  MK +GV
Sbjct: 132 LGKERNLNAARNLLLSIEKRSNGSVKLEDQFFNSLIRSYGKAGLFQESIKVFETMKGIGV 191

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVV+FN+LL+ILL+RGRT MAK VFDEM S+ GV PDV+TFNILIRGFCMNSMVD+GF
Sbjct: 192 SPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMVDEGF 251

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM RF+ DPDVVTYNT+VDGLCRAGKV  A N+V+GM +K +DLNPNVVT+TTL+R
Sbjct: 252 RFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVR 311

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ +DEAL VF+E+ +  ++PNRITYNTLI+
Sbjct: 312 GYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIK 346



 Score =  101 bits (251), Expect = 2e-19
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           FN L+R +    ++ E  + F  M+     P VVT+N+++  L R G+  +A+ V   M 
Sbjct: 234 FNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMS 293

Query: 370 SSGVP--PDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
              +   P+V T+  L+RG+CM   +D+    F EM    + P+ +TYNTL+ GL    +
Sbjct: 294 KKSLDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHE 353

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
                 +++GM  +     P+  T  TL+  +C  + +DEAL VF+ ++   + P+  TY
Sbjct: 354 YEKIKEILEGM-GEDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNVLPDSATY 412

Query: 16  NTLIQ 2
           + +I+
Sbjct: 413 SVIIR 417



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 8/221 (3%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRF--FNSLMRSYGRAGLIQESIKVFTMMKSV 470
           L R   +  ARN++  + KKS   + L      + +L+R Y     I E++ VF  M S 
Sbjct: 276 LCRAGKVGIARNVVRGMSKKS---LDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISR 332

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDD 293
            + P+ +T+N+L+  L      +  K++ + M   G   PD  T N LI   C    +D+
Sbjct: 333 RLRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDE 392

Query: 292 GFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVV 128
               F  MS   V PD  TY+ ++  LC+ G    A      +  K + L+     P V 
Sbjct: 393 ALNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVA 452

Query: 127 TWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
            +  +    C      +A  VF ++   G + +   Y TLI
Sbjct: 453 AYNPMFEYLCGNGKTKKAEIVFRQLMKRG-RQDPPAYKTLI 492



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
 Frame = -1

Query: 547 NSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPS 368
           N+L+ ++  A  + E++ VF  M  + V P   T++ ++  L +RG  + A++ FDE+  
Sbjct: 378 NTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAE 437

Query: 367 S-------GVPPDVFTFNILIRGFCMNSMVDDGFRFFME-MSRFEVDPDVVTYNTLVDGL 212
                   G  P V  +N +    C N         F + M R   DP    Y TL+ G 
Sbjct: 438 KEILLSDVGCTPLVAAYNPMFEYLCGNGKTKKAEIVFRQLMKRGRQDPPA--YKTLILGH 495

Query: 211 CRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEK 92
           CR G  +  + L+  M R+  D  P    + +L+ G  +K
Sbjct: 496 CREGTFKDGYELLVLMLRR--DFEPGFEIYDSLICGLLQK 533


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  322 bits (826), Expect = 5e-86
 Identities = 159/215 (73%), Positives = 186/215 (86%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLN ARN LFSI+++S G+VKL+DRFFNSL+RSYG+AGL QES++VF  MKSVGV
Sbjct: 128 LGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGV 187

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSLLLILL+RGRT MA+ VFDEM S+ GV PD +TFNILIRGFC NSMVD+GF
Sbjct: 188 SPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGF 247

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EMSRF+ DPD+VTYNTLVDGLCRAGKV  AHN+V GM +K  +LNP+VVT+TTL+R
Sbjct: 248 RFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVR 307

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC K  +DEAL VFEE+ + G+KPN ITYNTLI+
Sbjct: 308 GYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIK 342



 Score =  109 bits (272), Expect = 8e-22
 Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEM- 374
           FN L+R + +  ++ E  + F  M      P +VT+N+L+  L R G+  +A  V + M 
Sbjct: 230 FNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMV 289

Query: 373 -PSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
             S+ + PDV T+  L+RG+CM   +D+    F EM    + P+ +TYNTL+ GLC   K
Sbjct: 290 KKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQK 349

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +     + +G         P+  T  TLM  +C    +++ALEVFE++    ++P+  TY
Sbjct: 350 IDKIKQIFEGALGGG-GFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATY 408

Query: 16  NTLIQ 2
           + LI+
Sbjct: 409 SVLIR 413



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +N A N++  + KKS  ++      + +L+R Y     I E++ VF  M S G+
Sbjct: 272 LCRAGKVNIAHNVVNGMVKKST-NLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGL 330

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFD-EMPSSGVPPDVFTFNILIRGFCMNSMVDDGF 287
            P+ +T+N+L+  L    +    K++F+  +   G  PD  T N L+   C    ++D  
Sbjct: 331 KPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDAL 390

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDL-----NPNVVTW 122
             F +M    V PD  TY+ L+  LC+ G    A  L   +  K + L      P V  +
Sbjct: 391 EVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAY 450

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
            ++    C      +A  VF ++   G + + +++  LI+
Sbjct: 451 KSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIK 489



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
 Frame = -1

Query: 628 NLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFT-------MMKSV 470
           NLN A  +    EK    +V+     ++ L+R+  + G  + + ++F        +++  
Sbjct: 385 NLNDALEVF---EKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDD 441

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDG 290
           G +P V  + S+   L R G+T  A++VF ++   G   D  +F ILI+G C     + G
Sbjct: 442 GCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAG 500

Query: 289 FRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCR 158
           +   + M R +  PD+ TY +L+DGL + G+   A+  ++ M +
Sbjct: 501 YELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIK 544


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  320 bits (821), Expect = 2e-85
 Identities = 157/215 (73%), Positives = 185/215 (86%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR+RNLNAARN LFSIEKKS GSVKL+DRFFNSL+RSYG AGL QES+K+F+ MK + +
Sbjct: 180 LGRSRNLNAARNFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQESVKLFSTMKELAI 239

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           +PSVVTFNSLLL+LL+RGRT MA+ VFDEM  + GV PD FTFN+LIRGFCMNSMVD+GF
Sbjct: 240 APSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNSMVDEGF 299

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
            FF EMSRF+ +PDVVTYNTLVDGLCRAGKV  A N+VKGM +K VDLNPN+VT+TTL++
Sbjct: 300 HFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIK 359

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ +DEAL V +E+   G+KPN ITYNTLI+
Sbjct: 360 GYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIK 394



 Score =  109 bits (273), Expect = 6e-22
 Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
 Frame = -1

Query: 640 GRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGVS 461
           GRT   N ARN+   +    G  V+     FN L+R +    ++ E    F  M      
Sbjct: 257 GRT---NMARNVFDEMLGTYG--VEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCE 311

Query: 460 PSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVP--PDVFTFNILIRGFCMNSMVDDGF 287
           P VVT+N+L+  L R G+  +A+ V   M    V   P++ T+  LI+G+C    +D+  
Sbjct: 312 PDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEAL 371

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
               EM+   + P+ +TYNTL+ GLC A K+     ++ G  R R +  PN  T+ TL+ 
Sbjct: 372 LVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMR-RGEFVPNTCTFNTLIH 430

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
            +C+   +DEAL+VFE++    +  +  TY+ LI+
Sbjct: 431 THCQAGRLDEALKVFEKMLELQVLQDSATYSALIR 465



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 8/221 (3%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRF--FNSLMRSYGRAGLIQESIKVFTMMKSV 470
           L R   ++ ARN++  + KKS   V L      + +L++ Y     I E++ V   M   
Sbjct: 324 LCRAGKVDIARNVVKGMSKKS---VDLNPNIVTYTTLIKGYCGKQEIDEALLVLKEMTER 380

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDD 293
           G+ P+ +T+N+L+  L    +    +K+ D     G   P+  TFN LI   C    +D+
Sbjct: 381 GLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGRLDE 440

Query: 292 GFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVV 128
             + F +M   +V  D  TY+ L+  LC+ G    A  L   +  K + L+     P V 
Sbjct: 441 ALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVA 500

Query: 127 TWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
            +  +    C      +A  VF ++   G + +  +Y TLI
Sbjct: 501 AYNPMFEHLCRNGKTKKAERVFRQLMKRGTQ-DPPSYKTLI 540



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           FN+L+ ++ +AG + E++KVF  M  + V     T+++L+  L +RG    A+++FD++ 
Sbjct: 425 FNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLS 484

Query: 370 SS-------GVPPDVFTFNILIRGFCMNSMVDDGFRFFME-MSRFEVDPDVVTYNTLVDG 215
                    G  P V  +N +    C N       R F + M R   DP   +Y TL+ G
Sbjct: 485 DKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQDPP--SYKTLIMG 542

Query: 214 LCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMK 35
            CR G     + L+  M R+  D  P+   + +L+ G  +K     A    E++      
Sbjct: 543 HCREGTFEAGYELLVLMLRR--DFVPDAEIYESLITGLLQKDKPLLAKTTLEKMLRSSHL 600

Query: 34  PNRITYNTLIQ 2
           P    ++ +++
Sbjct: 601 PRASAFHCILE 611


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  318 bits (816), Expect = 7e-85
 Identities = 160/215 (74%), Positives = 186/215 (86%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR+RNLNAARN +FSIEKKSGG+VKL DRFFNSL+RSYG AGL QESIKVF  MK +GV
Sbjct: 137 LGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGV 196

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSLL I+L+RGRT MAK++FDEM  + GV PD +TFNILIRGFCMNSMVD+GF
Sbjct: 197 SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGF 256

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
            FF EMSRF+ DPDVVTYNTLVDGLCRAGKV+ AHN+VKGM +K  +L+PNVVT+TTL+R
Sbjct: 257 WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIR 316

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ + EAL +  E+ + G+KPN+ITYNTLIQ
Sbjct: 317 GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351



 Score =  102 bits (255), Expect = 8e-20
 Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEM- 374
           FN L+R +    ++ E    F  M      P VVT+N+L+  L R G+ ++A  V   M 
Sbjct: 239 FNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 298

Query: 373 -PSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
             S  + P+V T+  LIRG+CM   + +      EM    + P+ +TYNTL+ GLC A K
Sbjct: 299 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 358

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +     +++GM        P+  T  TL++ +C    ++EA  VFE+++   ++P+  TY
Sbjct: 359 LDKIKEILEGMVGDG-GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 417

Query: 16  NTLIQ 2
           + L++
Sbjct: 418 SVLVR 422



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A N++  + KKS  ++      + +L+R Y     + E++ +   M S G+
Sbjct: 281 LCRAGKVKIAHNVVKGMVKKSP-NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGL 339

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+ +T+N+L+  L    +    K++ + M   G   PD  T N LI+  C    +++ F
Sbjct: 340 KPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAF 399

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVVTW 122
             F +MS   V PD  TY+ LV  LC+ G  R A      +  K + L+     P V  +
Sbjct: 400 SVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAY 459

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             +    C      +A  VF ++   G + +  +Y TLI
Sbjct: 460 NPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLI 497



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
 Frame = -1

Query: 601 FSI-EKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFT-------MMKSVGVSPSVVT 446
           FS+ EK S   V+     ++ L+RS  + G  + + + F        ++  VG  P V  
Sbjct: 399 FSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAA 458

Query: 445 FNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMS 266
           +N +   L   G+T+ A++VF ++   G   D  ++  LI G C     + GF   + M 
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLML 517

Query: 265 RFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCR 158
           R +  PD  TY  ++DGL + G    AH  ++ M +
Sbjct: 518 RRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLK 553


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  318 bits (816), Expect = 7e-85
 Identities = 160/215 (74%), Positives = 186/215 (86%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR+RNLNAARN +FSIEKKSGG+VKL DRFFNSL+RSYG AGL QESIKVF  MK +GV
Sbjct: 137 LGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGV 196

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSLL I+L+RGRT MAK++FDEM  + GV PD +TFNILIRGFCMNSMVD+GF
Sbjct: 197 SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGF 256

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
            FF EMSRF+ DPDVVTYNTLVDGLCRAGKV+ AHN+VKGM +K  +L+PNVVT+TTL+R
Sbjct: 257 WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIR 316

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ + EAL +  E+ + G+KPN+ITYNTLIQ
Sbjct: 317 GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351



 Score =  102 bits (255), Expect = 8e-20
 Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEM- 374
           FN L+R +    ++ E    F  M      P VVT+N+L+  L R G+ ++A  V   M 
Sbjct: 239 FNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 298

Query: 373 -PSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
             S  + P+V T+  LIRG+CM   + +      EM    + P+ +TYNTL+ GLC A K
Sbjct: 299 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 358

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +     +++GM        P+  T  TL++ +C    ++EA  VFE+++   ++P+  TY
Sbjct: 359 LDKIKEILEGMVGDG-GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 417

Query: 16  NTLIQ 2
           + L++
Sbjct: 418 SVLVR 422



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A N++  + KKS  ++      + +L+R Y     + E++ +   M S G+
Sbjct: 281 LCRAGKVKIAHNVVKGMVKKSP-NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGL 339

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+ +T+N+L+  L    +    K++ + M   G   PD  T N LI+  C    +++ F
Sbjct: 340 KPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAF 399

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVVTW 122
             F +MS   V PD  TY+ LV  LC+ G  R A      +  K + L+     P V  +
Sbjct: 400 SVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAY 459

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             +    C      +A  VF ++   G + +  +Y TLI
Sbjct: 460 NPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLI 497



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
 Frame = -1

Query: 547 NSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPS 368
           N+L++++   G ++E+  VF  M  + V P   T++ L+  L +RG  + A++ FDE+  
Sbjct: 383 NTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442

Query: 367 S-------GVPPDVFTFNILIRGFCMNSMVDDGFRFFME-MSRFEVDPDVVTYNTLVDGL 212
                   G  P V  +N +    C N       R F + M R   DP   +Y TL+ G 
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP--SYKTLILGH 500

Query: 211 CRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEK 92
           CR G      +L+  M R+  D  P+  T+  ++ G  +K
Sbjct: 501 CREGTPEAGFDLLVLMLRR--DFVPDAETYGLMIDGLLKK 538



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
 Frame = -1

Query: 601 FSI-EKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFT-------MMKSVGVSPSVVT 446
           FS+ EK S   V+     ++ L+RS  + G  + + + F        ++  VG  P V  
Sbjct: 399 FSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAA 458

Query: 445 FNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMS 266
           +N +   L   G+T+ A++VF ++   G   D  ++  LI G C     + GF   + M 
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLML 517

Query: 265 RFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCR 158
           R +  PD  TY  ++DGL + G    AH  ++ M +
Sbjct: 518 RRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLK 553


>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
           gi|462415618|gb|EMJ20355.1| hypothetical protein
           PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  317 bits (812), Expect = 2e-84
 Identities = 156/215 (72%), Positives = 183/215 (85%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLNAARNLLFSIEK+S G+VKL+DRFFNSL+R+YGRAGL QESIK+FT MKS+GV
Sbjct: 120 LGRARNLNAARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKSLGV 179

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVV+FNSLL ILL++GRT MAK V+DEM S  GV PD +TFNILIRGFCMNSMVD+G+
Sbjct: 180 SPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGY 239

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF +MS F  DPDV+TYNTLVDGLCRAGKV  AHN+V GM ++  DL PNVVT+TTL+R
Sbjct: 240 RFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVTYTTLIR 299

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ +D+AL + EE+   G+KPN  TYNTLI+
Sbjct: 300 GYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIK 334



 Score =  105 bits (263), Expect = 9e-21
 Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           FN L+R +    ++ E  + F  M      P V+T+N+L+  L R G+ ++A  V + M 
Sbjct: 222 FNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMS 281

Query: 370 --SSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
             S  + P+V T+  LIRG+C+   +D       EM+   + P+  TYNTL+ GLC A K
Sbjct: 282 KRSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQK 341

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +     + +G      +  P+  T+ TLM  +C    +DEAL+VF +++   + P+  TY
Sbjct: 342 LDKIKEIFEGTMIGG-EFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATY 400

Query: 16  NTLI 5
           + LI
Sbjct: 401 SVLI 404



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A N++  + K+SG  +      + +L+R Y     I +++ +   M + G+
Sbjct: 264 LCRAGKVEIAHNVVNGMSKRSG-DLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGL 322

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+  T+N+L+  L    +    K++F+     G   PD  TFN L+   C    +D+  
Sbjct: 323 KPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEAL 382

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDL-----NPNVVTW 122
           + F +MS  +V PD  TY+ L+  LC+ G    A  L   + +K + L      P V ++
Sbjct: 383 KVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASY 442

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             +           +A EVF ++   G + + ++Y TLI
Sbjct: 443 NPIFGYLSSNGKTQKAEEVFRQLMRRGTQ-DPLSYKTLI 480



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 7/199 (3%)
 Frame = -1

Query: 580 GGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQ 401
           GG        FN+LM S+  AG + E++KVF  M  + V P   T++ L+  L +RG   
Sbjct: 355 GGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYP 414

Query: 400 MAKKVFDEMPSS-------GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDV 242
            A+++FDE+          G  P V ++N +      N         F ++ R     D 
Sbjct: 415 RAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQ-DP 473

Query: 241 VTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVF 62
           ++Y TL+ G C+ G     + L+  M R+  D  P+   + +L+ G  +K     A +  
Sbjct: 474 LSYKTLIMGNCKEGTYEAGYELLVWMLRR--DFVPDEEIYVSLIDGLLQKGKPLLAQQTL 531

Query: 61  EEIANCGMKPNRITYNTLI 5
           E++      P   T+++L+
Sbjct: 532 EKMLKSSHLPQTSTFHSLL 550


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  316 bits (810), Expect = 3e-84
 Identities = 160/215 (74%), Positives = 184/215 (85%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR R+LN ARN LFSIEK+S G VKL+ RFFNSLMR++ RAGL QESIKVFT+MKS GV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGV 180

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSLL ILL+RGRT MAKKV+DEM S+ GV PD FTFNILIRGFCMN MVDDGF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGF 240

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           R F ++SRF  +PDVVTYNTLVDGLCRAGKV  A+N+VKGM +K VDLNPNVVT+TTL+R
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC K+ +++AL VFEE+ N G+K N ITYNTLI+
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIK 335



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRF--FNSLMRSYGRAGLIQESIKVFTMMKSV 470
           L R   +  A N++  + KKS   V L      + +L+R Y     I++++ VF  M + 
Sbjct: 265 LCRAGKVTVAYNVVKGMGKKS---VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ 321

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGV-PPDVFTFNILIRGFCMNSMVDD 293
           G+  + +T+N+L+  L    + +  K + +     G   PD  TFN L+   C    +DD
Sbjct: 322 GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDD 381

Query: 292 GFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVV 128
             + F  MS  ++ PD  TY+ LV  LC+ G    A +L+  +  +++ L+     P V 
Sbjct: 382 ALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVA 441

Query: 127 TWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
            +  + +  CE     +A + F ++   G + +  +Y TLI
Sbjct: 442 AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLI 481



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
 Frame = -1

Query: 592 EKKSGGSVKLQDRFFNSLMRSYGRAG-------LIQESIKVFTMMKSVGVSPSVVTFNSL 434
           E+ S   ++     +++L+RS  + G       L+ + ++   ++   G  P V  +N +
Sbjct: 387 ERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPI 446

Query: 433 LLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEV 254
              L   G+T+ A+K F ++   G   D  ++  LI G C     + G+   + M R + 
Sbjct: 447 FKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDF 505

Query: 253 DPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEA 74
            PD  TY +L++GL    K   A   ++ M R      PN  T+ +++    E+    E+
Sbjct: 506 XPDFETYESLINGLLHMDKPLLALQSLEKMLRS--SHRPNSSTFHSILAKLLEQGRASES 563

Query: 73  LEVFEEIANCGMKPN 29
             + + + +  ++ N
Sbjct: 564 ASLIQLMLDKNIRQN 578


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  316 bits (810), Expect = 3e-84
 Identities = 160/215 (74%), Positives = 184/215 (85%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR R+LN ARN LFSIEK+S G VKL+ RFFNSLMR++ RAGL QESIKVFT+MKS GV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGV 180

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSLL ILL+RGRT MAKKV+DEM S+ GV PD FTFNILIRGFCMN MVDDGF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGF 240

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           R F ++SRF  +PDVVTYNTLVDGLCRAGKV  A+N+VKGM +K VDLNPNVVT+TTL+R
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC K+ +++AL VFEE+ N G+K N ITYNTLI+
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIK 335



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRF--FNSLMRSYGRAGLIQESIKVFTMMKSV 470
           L R   +  A N++  + KKS   V L      + +L+R Y     I++++ VF  M + 
Sbjct: 265 LCRAGKVTVAYNVVKGMGKKS---VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ 321

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGV-PPDVFTFNILIRGFCMNSMVDD 293
           G+  + +T+N+L+  L    + +  K + +     G   PD  TFN L+   C    +DD
Sbjct: 322 GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDD 381

Query: 292 GFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVV 128
             + F  MS  ++ PD  TY+ LV  LC+ G    A +L+  +  +++ L+     P V 
Sbjct: 382 ALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVA 441

Query: 127 TWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
            +  + +  CE     +A + F ++   G + +  +Y TLI
Sbjct: 442 AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLI 481



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
 Frame = -1

Query: 592 EKKSGGSVKLQDRFFNSLMRSYGRAG-------LIQESIKVFTMMKSVGVSPSVVTFNSL 434
           E+ S   ++     +++L+RS  + G       L+ + ++   ++   G  P V  +N +
Sbjct: 387 ERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPI 446

Query: 433 LLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEV 254
              L   G+T+ A+K F ++   G   D  ++  LI G C     + G+   + M R + 
Sbjct: 447 FKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDF 505

Query: 253 DPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEA 74
            PD  TY +L++GL    K   A   ++ M R      PN  T+ +++    E+    E+
Sbjct: 506 LPDFETYESLINGLLHMDKPLLALQSLEKMLRS--SHRPNSSTFHSILAKLLEQGRTSES 563

Query: 73  LEVFEEIANCGMKPN 29
             + + + +  ++ N
Sbjct: 564 ASLIQLMLDKNIRQN 578


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
           gi|550323558|gb|ERP53036.1| hypothetical protein
           POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  314 bits (805), Expect = 1e-83
 Identities = 156/215 (72%), Positives = 183/215 (85%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR  NLN ARN LFSIE++S GSVK++DRF N+L+RSYG AGL  E+IK+F++MKS GV
Sbjct: 133 LGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGV 192

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSV+TFNSLLLILL+RGRT MA  VFDEM  + GV PD +TFNILIRGFC NSMVD+GF
Sbjct: 193 SPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGF 252

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EMSRF  +PDVVTYNTLVDGLCRAGKVR AHN+VKGM +K  DL+P+VVT+TTL+R
Sbjct: 253 RFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVR 312

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ +DEAL VFEE+ + G+KPN ITYNTLI+
Sbjct: 313 GYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIK 347



 Score =  108 bits (270), Expect = 1e-21
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           FN L+R + +  ++ E  + F  M      P VVT+N+L+  L R G+ ++A  V   M 
Sbjct: 235 FNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMV 294

Query: 370 SS--GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
                + PDV T+  L+RG+CM   +D+    F EM    + P+ +TYNTL+ GLC   K
Sbjct: 295 KKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQK 354

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
                 ++ G    R    P+  T+ TLM   C+    DEAL++F+++    ++P+  TY
Sbjct: 355 FDKIKEILGGAVGGR-GFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATY 413

Query: 16  NTLIQ 2
           + LI+
Sbjct: 414 SVLIR 418



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFD-EM 374
           + +L+R Y     I E++ VF  M S G+ P+ +T+N+L+  L    +    K++    +
Sbjct: 307 YTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAV 366

Query: 373 PSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKV 194
              G  PD  T+N L+   C     D+  + F +M   +V PD  TY+ L+  LC+ G  
Sbjct: 367 GGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDF 426

Query: 193 RTAHNLVKGMCRKRVDL-----NPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPN 29
             A  L   +  + + L      P V  +  +    C+     +A  VF ++   G + +
Sbjct: 427 ERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-D 485

Query: 28  RITYNTLI 5
             +Y TLI
Sbjct: 486 PPSYKTLI 493


>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cicer arietinum]
          Length = 740

 Score =  311 bits (796), Expect = 1e-82
 Identities = 154/215 (71%), Positives = 182/215 (84%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR +NLN ARN LFSIEK+S G VKL+DRFFNSL+RSYG AGL +ESIK+F  MKS+GV
Sbjct: 131 LGREKNLNVARNFLFSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESIKLFQTMKSIGV 190

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSV+TFNS+LLILLRRGRT MAK+VFDEM S+ GV PD +T+NILIRGFC NSMVD+GF
Sbjct: 191 SPSVITFNSVLLILLRRGRTNMAKEVFDEMLSTYGVTPDTYTYNILIRGFCKNSMVDEGF 250

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
            FF EM+ F  DPDVVTYNTLVDGLCRAGK++TAHNLV GM +K   L+P+VVT+TTL+R
Sbjct: 251 HFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMSKKCGGLSPDVVTYTTLIR 310

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ V+EAL + EE+   G+KPN +TYNTLI+
Sbjct: 311 GYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLIK 345



 Score =  102 bits (255), Expect = 8e-20
 Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           +N L+R + +  ++ E    F  M S    P VVT+N+L+  L R G+ + A  + + M 
Sbjct: 233 YNILIRGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMS 292

Query: 370 SS--GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
               G+ PDV T+  LIRG+CM   V++      EM+   + P++VTYNTL+ GLC A K
Sbjct: 293 KKCGGLSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLIKGLCEAQK 352

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
                ++++ M +      P+  T+ TL+  +C    +DEA +VFE +    +  +  +Y
Sbjct: 353 WDKMKDILEQM-KGDSGAIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLQVSADSASY 411

Query: 16  NTLIQ 2
           + LI+
Sbjct: 412 SVLIR 416



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A NL+  + KK GG +      + +L+R Y     + E++ +   M   G+
Sbjct: 275 LCRAGKIKTAHNLVNGMSKKCGG-LSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGL 333

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPS-SGVPPDVFTFNILIRGFCMNSMVDDGF 287
            P++VT+N+L+  L    +    K + ++M   SG  PD  TFN LI   C    +D+ F
Sbjct: 334 KPNIVTYNTLIKGLCEAQKWDKMKDILEQMKGDSGAIPDACTFNTLINSHCCAGNLDEAF 393

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDL-----NPNVVTW 122
           + F  M + +V  D  +Y+ L+  LC+ G    A  L   +    + L      P   ++
Sbjct: 394 KVFENMKKLQVSADSASYSVLIRSLCQIGNYDKAEMLFDELFENEILLRSSGPKPLAASY 453

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             + +  CE     +A  V  ++   G + + ++Y T+I
Sbjct: 454 KRIFQYLCEHGKTKKAERVLRQLMKRGTQ-DPLSYKTVI 491



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 42/231 (18%)
 Frame = -1

Query: 595  IEKKSGGSVKLQDRF-FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILL 419
            +E+  G S  + D   FN+L+ S+  AG + E+ KVF  MK + VS    +++ L+  L 
Sbjct: 360  LEQMKGDSGAIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLQVSADSASYSVLIRSLC 419

Query: 418  RRGRTQMAKKVFDEM-------PSSGVPP------------------------------- 353
            + G    A+ +FDE+        SSG  P                               
Sbjct: 420  QIGNYDKAEMLFDELFENEILLRSSGPKPLAASYKRIFQYLCEHGKTKKAERVLRQLMKR 479

Query: 352  ---DVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAH 182
               D  ++  +I G C     ++G+   + M R +  PD+  Y+ L+DG  +  K   A 
Sbjct: 480  GTQDPLSYKTVILGHCKEGAFENGYELLIWMLRRDFLPDIDIYDYLIDGFLQKDKPLLAM 539

Query: 181  NLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPN 29
              ++ M +      P   TW +++    EK  V E+  V   +    ++ N
Sbjct: 540  EALEKMVKS--SYQPKTSTWHSVLARLLEKDCVHESASVLVAMLEKNIRQN 588


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497542|gb|AES78745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  306 bits (784), Expect = 3e-81
 Identities = 148/215 (68%), Positives = 181/215 (84%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR +NLN ARN L+SIEK+S G VKL+DRFFNSL+RSYG AGL +ES+K+F  MK +GV
Sbjct: 127 LGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGV 186

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SP VVTFNS+LL+LL+RGRT MAK+V+DEM  + GV PD +T+NILIRGFC NSMVD+GF
Sbjct: 187 SPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGF 246

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
            FF EM+ F+ DPDVVTYNTLVDGLCRAGK++ AHNLV GM +K  DL+P+VVT+TTL+R
Sbjct: 247 YFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIR 306

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ VDEAL++ EE+   G+KPN +TYNTLI+
Sbjct: 307 GYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIK 341



 Score =  101 bits (251), Expect = 2e-19
 Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
 Frame = -1

Query: 640 GRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGVS 461
           GRT   N A+ +   + K  G  VK     +N L+R + +  ++ E    F  M S    
Sbjct: 204 GRT---NMAKEVYDEMLKTYG--VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCD 258

Query: 460 PSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS--GVPPDVFTFNILIRGFCMNSMVDDGF 287
           P VVT+N+L+  L R G+ ++A  + + M      + PDV T+  LIRG+C    VD+  
Sbjct: 259 PDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEAL 318

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
               EM+   + P++VTYNTL+ GLC A K      +++ M      + P+  T+ TL+ 
Sbjct: 319 DILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSI-PDACTFNTLIN 377

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
            +C    +DEA +VFE +    +  +  +Y+ LI+
Sbjct: 378 SHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIR 412



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A NL+  + KK    +      + +L+R Y R   + E++ +   M   G+
Sbjct: 271 LCRAGKIKVAHNLVNGMSKKCK-DLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGL 329

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVP-PDVFTFNILIRGFCMNSMVDDGF 287
            P++VT+N+L+  L    +    K++ ++M   G   PD  TFN LI   C    +D+ F
Sbjct: 330 KPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAF 389

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVVTW 122
           + F  M + EV  D  +Y+ L+  LC+ G    A  L   +  K + L+     P   ++
Sbjct: 390 KVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASY 449

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             + +  CE     +A  V  ++   G + + ++Y  +I
Sbjct: 450 KCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVI 487



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
 Frame = -1

Query: 529 YGRAGLI-QESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPP 353
           YG+A ++  E  +   ++ S G  P   ++  +   L   G+T+ A++V  ++   G   
Sbjct: 420 YGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ- 478

Query: 352 DVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLV 173
           D  ++ I+I G C     ++G+   + M R +  PD+  Y+ L+DG  R  K   A   +
Sbjct: 479 DPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETL 538

Query: 172 KGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNT 11
           + M +      P   TW +++    E+  V E+  V   +    ++ N I ++T
Sbjct: 539 EKMLKS--SYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQN-INFST 589


>gb|EXB37231.1| hypothetical protein L484_020290 [Morus notabilis]
          Length = 415

 Score =  303 bits (776), Expect = 3e-80
 Identities = 150/215 (69%), Positives = 182/215 (84%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR+RNLNAARN LFSIEKKS GSVKL+DRFFNSL+RSYG AGL QES+++F+ M+ +G+
Sbjct: 87  LGRSRNLNAARNFLFSIEKKSIGSVKLEDRFFNSLIRSYGNAGLFQESLELFSTMERLGI 146

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPS+ TFNSLL +LL+RGRT MA+ VFDE+  + GV  D FTFN+LIRGFC NSMVD+GF
Sbjct: 147 SPSLATFNSLLSVLLKRGRTNMARNVFDEILGTLGVESDTFTFNVLIRGFCTNSMVDEGF 206

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
            FF EMSRF+ +PDVVTYNTL+DGLCRAGKV  A N+V+GM +K VDLNPNVVT+TTL+R
Sbjct: 207 HFFKEMSRFKCEPDVVTYNTLIDGLCRAGKVDIARNVVEGMKKKGVDLNPNVVTYTTLIR 266

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ +DEAL V +E+   G+KPN IT+NTLI+
Sbjct: 267 GYCGKQEIDEALLVLKEMTERGLKPNGITHNTLIK 301



 Score =  108 bits (271), Expect = 1e-21
 Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
 Frame = -1

Query: 640 GRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGVS 461
           GRT   N ARN+   I    G  V+     FN L+R +    ++ E    F  M      
Sbjct: 164 GRT---NMARNVFDEILGTLG--VESDTFTFNVLIRGFCTNSMVDEGFHFFKEMSRFKCE 218

Query: 460 PSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVP--PDVFTFNILIRGFCMNSMVDDGF 287
           P VVT+N+L+  L R G+  +A+ V + M   GV   P+V T+  LIRG+C    +D+  
Sbjct: 219 PDVVTYNTLIDGLCRAGKVDIARNVVEGMKKKGVDLNPNVVTYTTLIRGYCGKQEIDEAL 278

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
               EM+   + P+ +T+NTL+ GLC A K+     +++G  R   +  P+  T+ TL+ 
Sbjct: 279 LVLKEMTERGLKPNGITHNTLIKGLCEAQKLDDVRKILEGTMRWG-EFVPDTCTFNTLIH 337

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
            +C+   + EAL+VFE ++   +  +  TY  LI+
Sbjct: 338 AHCQAGCLHEALKVFERMSELQVPHDGATYGALIR 372



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   ++ ARN++  ++KK G  +      + +L+R Y     I E++ V   M   G+
Sbjct: 231 LCRAGKVDIARNVVEGMKKK-GVDLNPNVVTYTTLIRGYCGKQEIDEALLVLKEMTERGL 289

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+ +T N+L+  L    +    +K+ +     G   PD  TFN LI   C    + +  
Sbjct: 290 KPNGITHNTLIKGLCEAQKLDDVRKILEGTMRWGEFVPDTCTFNTLIHAHCQAGCLHEAL 349

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN 140
           + F  MS  +V  D  TY  L+   C+ G    A  L   + +K++ L+
Sbjct: 350 KVFERMSELQVPHDGATYGALIRCFCQRGDYVRAEELFDELWKKKILLS 398


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  300 bits (768), Expect = 3e-79
 Identities = 144/215 (66%), Positives = 181/215 (84%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LG +R+LN+ARN L SI ++S G+V LQDR+FN+L++SYG+AGL QES+KVF +MKS+G+
Sbjct: 128 LGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQSYGKAGLFQESLKVFKVMKSLGI 187

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSL  ILL+RGRT M  ++FDEM  + G  PDV+TFNILIRGFCMNSMVD GF
Sbjct: 188 SPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCMNSMVDKGF 247

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM R E +PDV+TYNT+VDGLCRAGKV  AHN++KGM ++   L+PNVV++TTL+R
Sbjct: 248 RFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVR 307

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYCEKQ V+ AL+VFEE+ +CG+KP  ITYNTL+Q
Sbjct: 308 GYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQ 342



 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
 Frame = -1

Query: 610 NLLFSIEKKSGGSVKLQDRF---------------FNSLMRSYGRAGLIQESIKVFTMMK 476
           N LFSI  K G +  + + F               FN L+R +    ++ +  + F  M+
Sbjct: 195 NSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEME 254

Query: 475 SVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG--VPPDVFTFNILIRGFCMNSM 302
                P V+T+N+++  L R G+ ++A  V   M   G  + P+V ++  L+RG+C    
Sbjct: 255 RHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQE 314

Query: 301 VDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTW 122
           V+     F EM    + P  +TYNTLV GLC A +      +++G       L P+  T+
Sbjct: 315 VERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSG-GLIPDTCTF 373

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
            TL+  +C    +DEA++VFE +    +KP+  TY+ LI+
Sbjct: 374 NTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIR 413



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
 Frame = -1

Query: 475 SVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVD 296
           S G+ P   TFN+L+      G    A KVF+ M    V PD  T++ILIR FC     D
Sbjct: 363 SGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFD 422

Query: 295 DGFRFFMEMSRFEV-------DPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNP 137
              + F ++ + E+        P +  YN + +  C+ GK + A  + + + R+      
Sbjct: 423 RAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ--- 479

Query: 136 NVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           +   +  L+ G+C++   ++A E+   +      PN + Y +LI+
Sbjct: 480 DPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYESLIE 524



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDE-- 377
           FN+L+  +   G + E++KVF  M  + V P   T++ L+    ++G    A+K+FD+  
Sbjct: 373 FNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLM 432

Query: 376 -----MPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGL 212
                +   G  P +  +N +   FC         + F ++ R     D   Y  L+ G 
Sbjct: 433 KKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMR-RGTQDPFAYELLIMGH 491

Query: 211 CRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKP 32
           C+ G    AH L+  M R+  D  PN+V + +L+ G  +K     A +  E++      P
Sbjct: 492 CKEGTFNDAHELLVLMLRR--DYVPNIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLP 549

Query: 31  NRITYNTLI 5
              T++ ++
Sbjct: 550 RSSTFHQIL 558



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
 Frame = -1

Query: 571 VKLQDRFFNSLMRSYGRAGLIQESIKVFT-------MMKSVGVSPSVVTFNSLLLILLRR 413
           VK     ++ L+RS+ + G    + K+F        +++  G +P +  +N +     + 
Sbjct: 401 VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKI 460

Query: 412 GRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTY 233
           G+T+ A+KVF ++   G   D F + +LI G C     +D     + M R +  P++V Y
Sbjct: 461 GKTKKAEKVFRQLMRRGTQ-DPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIY 519

Query: 232 NTLVDGLCRAGKVRTAHNLVKGMCR 158
            +L++GL +    + A++ ++ M +
Sbjct: 520 ESLIEGLLQKNDPKVAYDTLEKMLK 544


>ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
           gi|561011495|gb|ESW10402.1| hypothetical protein
           PHAVU_009G206300g [Phaseolus vulgaris]
          Length = 728

 Score =  299 bits (765), Expect = 6e-79
 Identities = 152/215 (70%), Positives = 177/215 (82%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLN ARNLLFSIEKKS G+VKL DRFFN+L+RSY  AGL +ES+K+F  MKSV V
Sbjct: 119 LGRHRNLNVARNLLFSIEKKSNGTVKLGDRFFNTLIRSYAEAGLFKESLKLFQTMKSVAV 178

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNS+L ILL+RGRT MAK+V+DEM  + GV PD+ T+N+LIRGFC NSMVD+GF
Sbjct: 179 SPSVVTFNSVLSILLKRGRTNMAKEVYDEMLHTYGVTPDICTYNVLIRGFCKNSMVDEGF 238

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM+    DPD+VTYNTLVDGLCRAGKVR A NLV  M +K   LNPNVVT+TTL+R
Sbjct: 239 RFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMTKKCEGLNPNVVTYTTLIR 298

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ VDEAL V EE++  G++PN ITYNTLI+
Sbjct: 299 GYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIK 333



 Score =  116 bits (291), Expect = 5e-24
 Identities = 60/185 (32%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           +N L+R + +  ++ E  + F  M +V   P +VT+N+L+  L R G+ ++A+ + + M 
Sbjct: 221 YNVLIRGFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMT 280

Query: 370 SS--GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
               G+ P+V T+  LIRG+CM   VD+      EMS   ++P+++TYNTL+ GLC A K
Sbjct: 281 KKCEGLNPNVVTYTTLIRGYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIKGLCEAHK 340

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +    +++K M +     +P+  T+ T++  +C    +DEAL+VFE +    ++ +  +Y
Sbjct: 341 LDKMKDVLKWM-KDNGGFSPDTFTFNTIIHSHCCAGNLDEALKVFESMKKFQVRMDSASY 399

Query: 16  NTLIQ 2
           +TLI+
Sbjct: 400 STLIR 404



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  ARNL+ ++ KK  G +      + +L+R Y     + E++ V   M   G+
Sbjct: 263 LCRAGKVRIARNLVNAMTKKCEG-LNPNVVTYTTLIRGYCMKQEVDEALVVLEEMSGRGI 321

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+++T+N+L+  L    +    K V   M  +G   PD FTFN +I   C    +D+  
Sbjct: 322 EPNMITYNTLIKGLCEAHKLDKMKDVLKWMKDNGGFSPDTFTFNTIIHSHCCAGNLDEAL 381

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDL-----NPNVVTW 122
           + F  M +F+V  D  +Y+TL+  LC+ G    A  L   +  K + L      P V  +
Sbjct: 382 KVFESMKKFQVRMDSASYSTLIRSLCQKGDYDMAELLFDELFEKEILLCNFGSKPLVAAY 441

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
           + L +  CE     +A  V  ++   G +  + +Y TLI
Sbjct: 442 SPLFQYLCEHGKSKKAERVMRQLMKRGTQDAQ-SYKTLI 479



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 7/192 (3%)
 Frame = -1

Query: 628 NLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAG-------LIQESIKVFTMMKSV 470
           NL+ A  +  S++K     V++    +++L+RS  + G       L  E  +   ++ + 
Sbjct: 376 NLDEALKVFESMKKFQ---VRMDSASYSTLIRSLCQKGDYDMAELLFDELFEKEILLCNF 432

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDG 290
           G  P V  ++ L   L   G+++ A++V  ++   G   D  ++  LI G C     + G
Sbjct: 433 GSKPLVAAYSPLFQYLCEHGKSKKAERVMRQLMKRGTQ-DAQSYKTLIMGHCKEGAYESG 491

Query: 289 FRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLM 110
           + F + M R +  PDV  Y+ L+DG     K   A   ++ M +      P   TW +++
Sbjct: 492 YEFLVWMLRRDFLPDVDIYDYLIDGFLLKNKPLLAKETLEKMLKS--SYQPKTATWHSIL 549

Query: 109 RGYCEKQWVDEA 74
               EK    E+
Sbjct: 550 AKLLEKGCAHES 561


>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X3 [Glycine max]
          Length = 734

 Score =  298 bits (762), Expect = 1e-78
 Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLN ARN LFSIEK S G+VKL+DRFFNSL+RSY  AGL +ES+K+F  MKS+ V
Sbjct: 122 LGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAV 181

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSL+ ILL+RGRT MAK+V+DEM  + GV PD  T+N+LIRGFC NSMVD+GF
Sbjct: 182 SPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGF 241

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM  F  D DVVTYNTLVDGLCRAGKVR A NLV GM +K   LNPNVVT+TTL+R
Sbjct: 242 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 301

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ V+EAL V EE+ + G+KPN ITYNTL++
Sbjct: 302 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 336



 Score =  104 bits (260), Expect = 2e-20
 Identities = 58/185 (31%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           +N L+R + +  ++ E  + F  M+S      VVT+N+L+  L R G+ ++A+ + + M 
Sbjct: 224 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 283

Query: 370 SS--GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
               G+ P+V T+  LIRG+CM   V++      EM+   + P+++TYNTLV GLC A K
Sbjct: 284 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 343

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +    ++++ M +     +P+  T+ T++  +C    +DEAL+VFE +    +  +  +Y
Sbjct: 344 LDKMKDVLERM-KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASY 402

Query: 16  NTLIQ 2
           +TLI+
Sbjct: 403 STLIR 407



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  ARNL+  + KK  G +      + +L+R Y     ++E++ V   M S G+
Sbjct: 266 LCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGL 324

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+++T+N+L+  L    +    K V + M S G   PD FTFN +I   C    +D+  
Sbjct: 325 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 384

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVVTW 122
           + F  M +F +  D  +Y+TL+  LC+ G    A  L   +  K + L+     P   ++
Sbjct: 385 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASY 444

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             +    CE     +A  V  ++   G +  + +Y T+I
Sbjct: 445 NPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVI 482



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
 Frame = -1

Query: 628 NLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAG-------LIQESIKVFTMMKSV 470
           NL+ A  +  S++K     +      +++L+RS  + G       L  E  +   ++   
Sbjct: 379 NLDEALKVFESMKKFR---IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKF 435

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDG 290
           G  P   ++N +   L   G+T+ A++V  ++   G   D  ++  +I G C     + G
Sbjct: 436 GSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESG 494

Query: 289 FRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLM 110
           +   M M R +  PD+  Y+ L+DG  +  K   A   ++ M +      P   TW +++
Sbjct: 495 YELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKS--SYQPKTSTWHSVL 552

Query: 109 RGYCEKQWVDEA 74
               EK    E+
Sbjct: 553 AKLLEKGCAHES 564


>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 741

 Score =  298 bits (762), Expect = 1e-78
 Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLN ARN LFSIEK S G+VKL+DRFFNSL+RSY  AGL +ES+K+F  MKS+ V
Sbjct: 120 LGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAV 179

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSL+ ILL+RGRT MAK+V+DEM  + GV PD  T+N+LIRGFC NSMVD+GF
Sbjct: 180 SPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGF 239

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM  F  D DVVTYNTLVDGLCRAGKVR A NLV GM +K   LNPNVVT+TTL+R
Sbjct: 240 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 299

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ V+EAL V EE+ + G+KPN ITYNTL++
Sbjct: 300 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 334



 Score =  104 bits (260), Expect = 2e-20
 Identities = 58/185 (31%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           +N L+R + +  ++ E  + F  M+S      VVT+N+L+  L R G+ ++A+ + + M 
Sbjct: 222 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 281

Query: 370 SS--GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
               G+ P+V T+  LIRG+CM   V++      EM+   + P+++TYNTLV GLC A K
Sbjct: 282 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 341

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +    ++++ M +     +P+  T+ T++  +C    +DEAL+VFE +    +  +  +Y
Sbjct: 342 LDKMKDVLERM-KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASY 400

Query: 16  NTLIQ 2
           +TLI+
Sbjct: 401 STLIR 405



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  ARNL+  + KK  G +      + +L+R Y     ++E++ V   M S G+
Sbjct: 264 LCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGL 322

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+++T+N+L+  L    +    K V + M S G   PD FTFN +I   C    +D+  
Sbjct: 323 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 382

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVVTW 122
           + F  M +F +  D  +Y+TL+  LC+ G    A  L   +  K + L+     P   ++
Sbjct: 383 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASY 442

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             +    CE     +A  V  ++   G +  + +Y T+I
Sbjct: 443 NPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVI 480



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
 Frame = -1

Query: 628 NLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAG-------LIQESIKVFTMMKSV 470
           NL+ A  +  S++K     +      +++L+RS  + G       L  E  +   ++   
Sbjct: 377 NLDEALKVFESMKKFR---IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKF 433

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDG 290
           G  P   ++N +   L   G+T+ A++V  ++   G   D  ++  +I G C     + G
Sbjct: 434 GSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESG 492

Query: 289 FRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLM 110
           +   M M R +  PD+  Y+ L+DG  +  K   A   ++ M +      P   TW +++
Sbjct: 493 YELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKS--SYQPKTSTWHSVL 550

Query: 109 RGYCEKQWVDEA 74
               EK    E+
Sbjct: 551 AKLLEKGCAHES 562


>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 743

 Score =  298 bits (762), Expect = 1e-78
 Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLN ARN LFSIEK S G+VKL+DRFFNSL+RSY  AGL +ES+K+F  MKS+ V
Sbjct: 122 LGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAV 181

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSL+ ILL+RGRT MAK+V+DEM  + GV PD  T+N+LIRGFC NSMVD+GF
Sbjct: 182 SPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGF 241

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM  F  D DVVTYNTLVDGLCRAGKVR A NLV GM +K   LNPNVVT+TTL+R
Sbjct: 242 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 301

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ V+EAL V EE+ + G+KPN ITYNTL++
Sbjct: 302 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 336



 Score =  104 bits (260), Expect = 2e-20
 Identities = 58/185 (31%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           +N L+R + +  ++ E  + F  M+S      VVT+N+L+  L R G+ ++A+ + + M 
Sbjct: 224 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 283

Query: 370 SS--GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGK 197
               G+ P+V T+  LIRG+CM   V++      EM+   + P+++TYNTLV GLC A K
Sbjct: 284 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 343

Query: 196 VRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITY 17
           +    ++++ M +     +P+  T+ T++  +C    +DEAL+VFE +    +  +  +Y
Sbjct: 344 LDKMKDVLERM-KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASY 402

Query: 16  NTLIQ 2
           +TLI+
Sbjct: 403 STLIR 407



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  ARNL+  + KK  G +      + +L+R Y     ++E++ V   M S G+
Sbjct: 266 LCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGL 324

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSG-VPPDVFTFNILIRGFCMNSMVDDGF 287
            P+++T+N+L+  L    +    K V + M S G   PD FTFN +I   C    +D+  
Sbjct: 325 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 384

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PNVVTW 122
           + F  M +F +  D  +Y+TL+  LC+ G    A  L   +  K + L+     P   ++
Sbjct: 385 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASY 444

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
             +    CE     +A  V  ++   G +  + +Y T+I
Sbjct: 445 NPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVI 482



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
 Frame = -1

Query: 628 NLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAG-------LIQESIKVFTMMKSV 470
           NL+ A  +  S++K     +      +++L+RS  + G       L  E  +   ++   
Sbjct: 379 NLDEALKVFESMKKFR---IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKF 435

Query: 469 GVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDG 290
           G  P   ++N +   L   G+T+ A++V  ++   G   D  ++  +I G C     + G
Sbjct: 436 GSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESG 494

Query: 289 FRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLM 110
           +   M M R +  PD+  Y+ L+DG  +  K   A   ++ M +      P   TW +++
Sbjct: 495 YELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKS--SYQPKTSTWHSVL 552

Query: 109 RGYCEKQWVDEA 74
               EK    E+
Sbjct: 553 AKLLEKGCAHES 564


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  293 bits (749), Expect = 4e-77
 Identities = 141/215 (65%), Positives = 180/215 (83%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LG +R+LN+ARN L SI ++S G+V LQDR+FN+L++SYG+AGL QES+KVF +MKS+G+
Sbjct: 122 LGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNTLIQSYGKAGLFQESLKVFKVMKSLGI 181

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFNSL  ILL+RGRT M  ++FDEM  + G  PDV+TFNILIRGFC+NSMVD GF
Sbjct: 182 SPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCINSMVDKGF 241

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           RFF EM R E +P+V+TYNT+VDGLCRAGKV  AHN++KGM ++   L+PNVV++TTL+R
Sbjct: 242 RFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMAKRGHQLSPNVVSYTTLVR 301

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYCEKQ V+ AL+VFEE+ + G+KP  ITYNTL+Q
Sbjct: 302 GYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQ 336



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A N+L  + K+ G  +      + +L+R Y     ++ ++ VF  M   G+
Sbjct: 266 LCRAGKVEIAHNVLKGMAKR-GHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGL 324

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFD-EMPSSGVPPDVFTFNILIRGFCMNSMVDDGF 287
            P+ +T+N+L+  L    R    K++ +  + S G+ PD  TFN LI   C    +D+  
Sbjct: 325 KPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVGNLDEAV 384

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDL-----NPNVVTW 122
           + F  M   +V PD  TY+ L+   C+ G    A  L   + +K V L      P +  +
Sbjct: 385 KVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAY 444

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
             +   +C+     +A +VF ++   G + +   Y  LI+
Sbjct: 445 NPMFEYFCKIGKTKKAEKVFRQLMRRGTQ-DPFAYELLIR 483



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           FN+L+  +   G + E++KVF  M  + V P   T++ L+    ++G    A+K+FD++ 
Sbjct: 367 FNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLM 426

Query: 370 SS-------GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGL 212
                    G  P +  +N +   FC         + F ++ R     D   Y  L+ G 
Sbjct: 427 KKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ-DPFAYELLIRGH 485

Query: 211 CRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKP 32
           C+ G    AH L+  M R+  D  PN+V + +L+ G  +K     A +  E++      P
Sbjct: 486 CKEGTFNDAHGLLVLMLRR--DYVPNIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLP 543

Query: 31  NRITYNTLI 5
               Y+ ++
Sbjct: 544 RSSIYHQIL 552



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
 Frame = -1

Query: 571 VKLQDRFFNSLMRSYGRAGLIQESIKVF-------TMMKSVGVSPSVVTFNSLLLILLRR 413
           VK     ++ L+RS+ + G    + K+F        +++  G +P +  +N +     + 
Sbjct: 395 VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKI 454

Query: 412 GRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTY 233
           G+T+ A+KVF ++   G   D F + +LIRG C     +D     + M R +  P++V Y
Sbjct: 455 GKTKKAEKVFRQLMRRGTQ-DPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIY 513

Query: 232 NTLVDGLCRAGKVRTAHNLVKGMCR 158
            +L++GL +    + A++ ++ M +
Sbjct: 514 ESLIEGLLQKNDPKVAYDTLEKMLK 538


>ref|XP_006304700.1| hypothetical protein CARUB_v10011958mg [Capsella rubella]
           gi|482573411|gb|EOA37598.1| hypothetical protein
           CARUB_v10011958mg [Capsella rubella]
          Length = 796

 Score =  288 bits (737), Expect = 1e-75
 Identities = 142/215 (66%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLN ARN LFSIEK+S G VKL DR+FNSL+RSYG AGL QES+K+F  MK +G+
Sbjct: 191 LGRARNLNIARNFLFSIEKRSNGCVKLHDRYFNSLIRSYGNAGLFQESVKLFQTMKKMGI 250

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           SPSVVTFN LL ILL+RGRT MA  +FDEM  + GV PD FTFNILI GFC NSMVD+ F
Sbjct: 251 SPSVVTFNILLSILLKRGRTAMAHDLFDEMRRTYGVSPDSFTFNILISGFCKNSMVDEAF 310

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMR 107
           R F EM  +  DPDVVTYNT++DGLCRAGKVR AHN++ GM +K   ++PN+V++TTL+R
Sbjct: 311 RVFKEMELYHCDPDVVTYNTIIDGLCRAGKVRIAHNVLNGMMKKATHVHPNIVSYTTLVR 370

Query: 106 GYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           GYC KQ +DEAL VF ++   G+KPN +TYNTLI+
Sbjct: 371 GYCMKQDLDEALLVFHQMLCRGLKPNAVTYNTLIK 405



 Score =  102 bits (255), Expect = 8e-20
 Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
 Frame = -1

Query: 610 NLLFSIEKKSGGSVKLQDRF---------------FNSLMRSYGRAGLIQESIKVFTMMK 476
           N+L SI  K G +    D F               FN L+  + +  ++ E+ +VF  M+
Sbjct: 258 NILLSILLKRGRTAMAHDLFDEMRRTYGVSPDSFTFNILISGFCKNSMVDEAFRVFKEME 317

Query: 475 SVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEM--PSSGVPPDVFTFNILIRGFCMNSM 302
                P VVT+N+++  L R G+ ++A  V + M   ++ V P++ ++  L+RG+CM   
Sbjct: 318 LYHCDPDVVTYNTIIDGLCRAGKVRIAHNVLNGMMKKATHVHPNIVSYTTLVRGYCMKQD 377

Query: 301 VDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVTW 122
           +D+    F +M    + P+ VTYNTL+ GL  A +      ++ G         P+  T+
Sbjct: 378 LDEALLVFHQMLCRGLKPNAVTYNTLIKGLSVAQRYDEIKVILNGGGDAFTSFAPDACTF 437

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
             L++ +C+   +D A++VF+E+ N  + P+  +Y+ LI+
Sbjct: 438 NILIKVHCDSGHLDAAMKVFQEMVNIKLHPDSASYSVLIR 477



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           L R   +  A N+L  + KK+   V      + +L+R Y     + E++ VF  M   G+
Sbjct: 335 LCRAGKVRIAHNVLNGMMKKAT-HVHPNIVSYTTLVRGYCMKQDLDEALLVFHQMLCRGL 393

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS--GVPPDVFTFNILIRGFCMNSMVDDG 290
            P+ VT+N+L+  L    R    K + +    +     PD  TFNILI+  C +  +D  
Sbjct: 394 KPNAVTYNTLIKGLSVAQRYDEIKVILNGGGDAFTSFAPDACTFNILIKVHCDSGHLDAA 453

Query: 289 FRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDL-----NPNVVT 125
            + F EM   ++ PD  +Y+ L+  LC   +   A  L K +  K+V L      P    
Sbjct: 454 MKVFQEMVNIKLHPDSASYSVLIRTLCLRNEFDRAELLFKELFDKQVLLGKDGCKPLSAA 513

Query: 124 WTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
           +  +    C      +A ++F ++   G + +  +Y TLI
Sbjct: 514 YNPMFEYLCANGKTKQAEKIFRQLMKRGAQ-DPPSYRTLI 552



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
 Frame = -1

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGFCMNSMVDDGFR 284
           +P   TFN L+ +    G    A KVF EM +  + PD  ++++LIR  C+ +  D    
Sbjct: 431 APDACTFNILIKVHCDSGHLDAAMKVFQEMVNIKLHPDSASYSVLIRTLCLRNEFDRAEL 490

Query: 283 FFMEMSRFEV-------DPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNPNVVT 125
            F E+   +V        P    YN + + LC  GK + A  + + + ++     P+   
Sbjct: 491 LFKELFDKQVLLGKDGCKPLSAAYNPMFEYLCANGKTKQAEKIFRQLMKRGAQDPPS--- 547

Query: 124 WTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
           + TL+ G+C +     A E+   +      P+  TY  LI
Sbjct: 548 YRTLIMGHCREGQFKAAYELLVLMLRRDFVPDPETYELLI 587



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
 Frame = -1

Query: 541 LMRSYGRAGLI-QESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS 365
           L   + RA L+ +E      ++   G  P    +N +   L   G+T+ A+K+F ++   
Sbjct: 481 LRNEFDRAELLFKELFDKQVLLGKDGCKPLSAAYNPMFEYLCANGKTKQAEKIFRQLMKR 540

Query: 364 GVPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTA 185
           G   D  ++  LI G C        +   + M R +  PD  TY  L+DGL + G+   A
Sbjct: 541 GAQ-DPPSYRTLIMGHCREGQFKAAYELLVLMLRRDFVPDPETYELLIDGLLKIGEALLA 599

Query: 184 HNLVKGMCR 158
           H+ ++ M R
Sbjct: 600 HDTLQRMLR 608


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  288 bits (737), Expect = 1e-75
 Identities = 147/220 (66%), Positives = 172/220 (78%), Gaps = 6/220 (2%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKSGGSVKLQDRFFNSLMRSYGRAGLIQESIKVFTMMKSVGV 464
           LGR RNLNAARN LFSIEK+S G VKL+D+FFNSL+RSYG AGL QE++ VF  MKS+G+
Sbjct: 122 LGRNRNLNAARNFLFSIEKRSNGKVKLEDKFFNSLIRSYGAAGLFQEAVNVFKTMKSMGI 181

Query: 463 SPSVVTFNSLLLILLRRGRTQMAKKVFDEMPSS-GVPPDVFTFNILIRGFCMNSMVDDGF 287
           S SV +FNSL  +LL+RGRT M + V+DEM    GV PD  TFNILIRGFCM+SMVD+GF
Sbjct: 182 SASVFSFNSLFSVLLKRGRTSMVRNVYDEMLGMYGVEPDTHTFNILIRGFCMSSMVDEGF 241

Query: 286 RFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVD-----LNPNVVTW 122
            FF EM RF+ +PDVVTYNTLVDGLCR GKV  A N+VKGM  K  +     LNPNVVT+
Sbjct: 242 WFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMMSKSSEGELNQLNPNVVTY 301

Query: 121 TTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLIQ 2
           TTL+RGYC +Q VDEAL V EE+ + GMKPN ITYNTL +
Sbjct: 302 TTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFK 341



 Score =  104 bits (259), Expect = 3e-20
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
 Frame = -1

Query: 550 FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLLILLRRGRTQMAKKVFDEMP 371
           FN L+R +  + ++ E    F  M+     P VVT+N+L+  L R G+ ++A+ V   M 
Sbjct: 224 FNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMM 283

Query: 370 SSG-------VPPDVFTFNILIRGFCMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGL 212
           S         + P+V T+  LIRG+C+   VD+      EM+   + P+ +TYNTL  GL
Sbjct: 284 SKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGL 343

Query: 211 CRAGKVRTAHNLVKGMCRKRVDLNPNVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKP 32
           C A ++     +++G  R      P+  T+ TLM  +C    ++EAL+VF  ++   + P
Sbjct: 344 CEAKRLDKIKEILEGAMRGE-GFTPDTCTFNTLMHSHCIAGNLEEALKVFRMMSELKVPP 402

Query: 31  NRITYNTLIQ 2
           +  TY+ LI+
Sbjct: 403 DSATYSVLIR 412



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
 Frame = -1

Query: 643 LGRTRNLNAARNLLFSIEKKS--GGSVKLQDRF--FNSLMRSYGRAGLIQESIKVFTMMK 476
           L R   +  ARN++  +  KS  G   +L      + +L+R Y     + E++ V   M 
Sbjct: 266 LCRDGKVEIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMT 325

Query: 475 SVGVSPSVVTFNSLLLILLRRGRTQMAKKVFD-EMPSSGVPPDVFTFNILIRGFCMNSMV 299
           S G+ P+ +T+N+L   L    R    K++ +  M   G  PD  TFN L+   C+   +
Sbjct: 326 SQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNL 385

Query: 298 DDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLN-----PN 134
           ++  + F  MS  +V PD  TY+ L+   C       A  L   + +K++ L+     P 
Sbjct: 386 EEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPI 445

Query: 133 VVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPNRITYNTLI 5
           V ++  +    C      +A EVF ++   G + +  ++ TLI
Sbjct: 446 VASYKPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSFKTLI 487



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 42/216 (19%)
 Frame = -1

Query: 550  FNSLMRSYGRAGLIQESIKVFTMMKSVGVSPSVVTFNSLLL------------------- 428
            FN+LM S+  AG ++E++KVF MM  + V P   T++ L+                    
Sbjct: 372  FNTLMHSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELS 431

Query: 427  -----------------------ILLRRGRTQMAKKVFDEMPSSGVPPDVFTFNILIRGF 317
                                    L   GRT+ A +VF ++   G   D  +F  LI G 
Sbjct: 432  KKQILLSDCGCTPIVASYKPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSFKTLIMGH 490

Query: 316  CMNSMVDDGFRFFMEMSRFEVDPDVVTYNTLVDGLCRAGKVRTAHNLVKGMCRKRVDLNP 137
            C     + G++  + M R +  PDV  Y++L+DG    G    A   ++ M +      P
Sbjct: 491  CREGTYEAGYKLVVLMLRRDYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLKS--SHLP 548

Query: 136  NVVTWTTLMRGYCEKQWVDEALEVFEEIANCGMKPN 29
               T+ +++    EK    E+  +F  +     +PN
Sbjct: 549  RTSTFHSILAALLEKHCARESASLFSLMLEKNFRPN 584