BLASTX nr result
ID: Cocculus23_contig00043551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00043551
(274 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi... 139 5e-31
ref|XP_004242217.1| PREDICTED: pentatricopeptide repeat-containi... 126 4e-27
ref|XP_002512033.1| pentatricopeptide repeat-containing protein,... 126 4e-27
ref|XP_006365973.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_007214226.1| hypothetical protein PRUPE_ppa021308mg [Prun... 124 2e-26
ref|XP_002304609.1| hypothetical protein POPTR_0003s15430g [Popu... 123 3e-26
ref|XP_006468590.1| PREDICTED: pentatricopeptide repeat-containi... 115 5e-24
ref|XP_007040990.1| Tetratricopeptide repeat-like superfamily pr... 114 1e-23
ref|XP_006448585.1| hypothetical protein CICLE_v10018364mg [Citr... 112 7e-23
ref|XP_004293856.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
gb|EYU43624.1| hypothetical protein MIMGU_mgv1a022008mg [Mimulus... 105 7e-21
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi... 105 7e-21
ref|XP_004494495.1| PREDICTED: pentatricopeptide repeat-containi... 105 9e-21
ref|XP_007213915.1| hypothetical protein PRUPE_ppa005675mg [Prun... 97 2e-18
ref|XP_003626108.1| Pentatricopeptide repeat-containing protein ... 90 4e-16
emb|CBI27247.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|XP_007043745.1| Tetratricopeptide repeat-like superfamily pr... 86 5e-15
ref|XP_006421829.1| hypothetical protein CICLE_v10004587mg [Citr... 86 7e-15
ref|XP_006494379.1| PREDICTED: putative pentatricopeptide repeat... 85 1e-14
gb|EXC11892.1| hypothetical protein L484_005353 [Morus notabilis] 84 2e-14
>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 324
Score = 139 bits (349), Expect = 5e-31
Identities = 64/89 (71%), Positives = 77/89 (86%)
Frame = +3
Query: 6 GLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTL 185
GL LFREM+V E +PD++TLGSVLS CA MGSLGLLVGR++HGF KNGW+L+V+LGT+
Sbjct: 56 GLALFREMVVNEGLRPDKVTLGSVLSGCARMGSLGLLVGRSIHGFTAKNGWELSVDLGTV 115
Query: 186 LVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCGFL +AFRVF+ M+EKNV SW
Sbjct: 116 LVDMYAKCGFLKSAFRVFDLMQEKNVASW 144
>ref|XP_004242217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Solanum lycopersicum]
Length = 862
Score = 126 bits (316), Expect = 4e-27
Identities = 53/90 (58%), Positives = 75/90 (83%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
+G+ LFREM+++E+ KPDQ+T+G +L+ C+ MGS+GLL+G+++HGF KN W+L VELGT
Sbjct: 172 EGVALFREMVIFEQLKPDQVTIGPILAGCSEMGSIGLLLGKSVHGFAVKNNWELNVELGT 231
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCGFL+ A VF+ MK++NVV+W
Sbjct: 232 CLVDMYAKCGFLNFASLVFDMMKDRNVVTW 261
>ref|XP_002512033.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549213|gb|EEF50702.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 319
Score = 126 bits (316), Expect = 4e-27
Identities = 57/90 (63%), Positives = 72/90 (80%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
+GL LFREMM E KPDQ+T+G+VLS C MG LGLLVG++ HGF+ KN W+L VE+GT
Sbjct: 55 RGLLLFREMMTNSELKPDQVTVGTVLSGCTHMGFLGLLVGKSAHGFIMKNRWELNVEIGT 114
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
+LVDMY KCG+L A RVF+ MKE+NV++W
Sbjct: 115 VLVDMYVKCGYLKNAIRVFDLMKERNVMTW 144
>ref|XP_006365973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 441
Score = 124 bits (312), Expect = 1e-26
Identities = 52/90 (57%), Positives = 74/90 (82%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
+G+ LFREM+++E+ KPDQ+T+G +L+ C+ MGS+GL +G+++HGF KN W+L VELGT
Sbjct: 172 EGVTLFREMVIFEQLKPDQVTIGPILAGCSEMGSIGLFLGKSVHGFAVKNNWELNVELGT 231
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCGFL+ A VF+ MK++NVV+W
Sbjct: 232 CLVDMYAKCGFLNFASLVFDMMKDRNVVTW 261
>ref|XP_007214226.1| hypothetical protein PRUPE_ppa021308mg [Prunus persica]
gi|462410091|gb|EMJ15425.1| hypothetical protein
PRUPE_ppa021308mg [Prunus persica]
Length = 438
Score = 124 bits (310), Expect = 2e-26
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +3
Query: 6 GLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTL 185
GL +FR+M+ KPDQ+T GSVLS CA +G LGLLVG+++HGF+ KNGW+L VE+GT+
Sbjct: 172 GLSVFRDMVKDGGLKPDQVTAGSVLSGCAHLGHLGLLVGKSVHGFMVKNGWELNVEIGTV 231
Query: 186 LVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCGFL A RVFE M+E+NV+SW
Sbjct: 232 LVDMYAKCGFLKGAARVFELMQERNVMSW 260
>ref|XP_002304609.1| hypothetical protein POPTR_0003s15430g [Populus trichocarpa]
gi|222842041|gb|EEE79588.1| hypothetical protein
POPTR_0003s15430g [Populus trichocarpa]
Length = 431
Score = 123 bits (308), Expect = 3e-26
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
QGL F+EMM E KPDQ+T+GSVLS CA MGSLGLL G+++HGFV KNGW+L V++GT
Sbjct: 167 QGLSFFQEMMANENPKPDQVTVGSVLSGCAHMGSLGLLAGKSVHGFVVKNGWELNVDIGT 226
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LLVDMY KCGF A VF M+E+NV +W
Sbjct: 227 LLVDMYAKCGFFKNAVWVFVLMQERNVSTW 256
>ref|XP_006468590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 454
Score = 115 bits (289), Expect = 5e-24
Identities = 51/89 (57%), Positives = 70/89 (78%)
Frame = +3
Query: 6 GLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTL 185
GL+LFREM+ E PDQ+T+G+VLS C+ +GS+GLL+G++ HGF+ KN W+L ++ T+
Sbjct: 170 GLKLFREMISNEGLTPDQMTIGAVLSGCSHLGSVGLLMGKSAHGFIVKNEWELNEQIATI 229
Query: 186 LVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCGFL A VFE M+E+NV+SW
Sbjct: 230 LVDMYAKCGFLKYALMVFELMEERNVISW 258
>ref|XP_007040990.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508704925|gb|EOX96821.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 435
Score = 114 bits (286), Expect = 1e-23
Identities = 51/89 (57%), Positives = 67/89 (75%)
Frame = +3
Query: 6 GLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTL 185
G FREM+ E +KPDQ+T+G L CA MGSLGLLVG+++HGF+ KNGW L V++GT+
Sbjct: 169 GFSCFREMVASERYKPDQLTVGLALGGCAHMGSLGLLVGKSVHGFIVKNGWGLDVKIGTI 228
Query: 186 LVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCG L A VF M+++NV++W
Sbjct: 229 LVDMYAKCGLLKLACIVFNLMQQRNVMTW 257
>ref|XP_006448585.1| hypothetical protein CICLE_v10018364mg [Citrus clementina]
gi|557551196|gb|ESR61825.1| hypothetical protein
CICLE_v10018364mg [Citrus clementina]
Length = 454
Score = 112 bits (279), Expect = 7e-23
Identities = 49/89 (55%), Positives = 69/89 (77%)
Frame = +3
Query: 6 GLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTL 185
GL+LFREM+ PD++T+G+VLS C+ +GS+GLL+G++ HGF+ KN W+L ++ T+
Sbjct: 170 GLKLFREMISNVGLSPDRMTIGAVLSGCSHLGSVGLLMGKSAHGFIVKNEWELNEQIATI 229
Query: 186 LVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KCGFL A VFE M+E+NV+SW
Sbjct: 230 LVDMYAKCGFLKYALMVFELMEERNVISW 258
>ref|XP_004293856.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Fragaria vesca subsp. vesca]
Length = 389
Score = 107 bits (267), Expect = 2e-21
Identities = 51/90 (56%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +3
Query: 6 GLRLFREMMVYEE-FKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
GL LFR+M++ EE + Q+T VLS CA +GS+GLLVG+++HGFV KN W++ ELGT
Sbjct: 125 GLSLFRDMVMGEEGVRLGQVTAVVVLSGCAHLGSVGLLVGKSVHGFVVKNRWEMNAELGT 184
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
+L+DMY KCGF+ A +VFE M+EKNV++W
Sbjct: 185 VLIDMYAKCGFMKGAEQVFELMQEKNVMAW 214
>gb|EYU43624.1| hypothetical protein MIMGU_mgv1a022008mg [Mimulus guttatus]
Length = 452
Score = 105 bits (262), Expect = 7e-21
Identities = 52/93 (55%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
Frame = +3
Query: 9 LRLFREMMVYEE-----FKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVE 173
L LFREMMV KPDQ+TLGS+L C MGS+GL+ G+++H FV KN W L VE
Sbjct: 175 LPLFREMMVSRNVTGDCLKPDQLTLGSILGGCGRMGSVGLVFGKSIHAFVIKNKWDLNVE 234
Query: 174 LGTLLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LGT LVDMY KCG L + +F MK NVV+W
Sbjct: 235 LGTCLVDMYAKCGLLKTSSLIFSMMKGNNVVAW 267
>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 436
Score = 105 bits (262), Expect = 7e-21
Identities = 49/88 (55%), Positives = 66/88 (75%)
Frame = +3
Query: 9 LRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTLL 188
L LF++M++ PDQ+ GS+L+ CA MGSLGLL G+++HGFV KN W+L +ELGT+L
Sbjct: 172 LLLFQDMII-NGINPDQMAAGSILNGCAHMGSLGLLAGKSVHGFVVKNRWELNLELGTVL 230
Query: 189 VDMYTKCGFLSAAFRVFERMKEKNVVSW 272
VDMY KCGFL A ++F M E+NV +W
Sbjct: 231 VDMYAKCGFLKYACQIFNLMSERNVRTW 258
>ref|XP_004494495.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cicer arietinum]
Length = 432
Score = 105 bits (261), Expect = 9e-21
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
Q L LFR M++ E KPDQ+T G+VLS CA MG GL G+++HG++ KNGW+L VE+G
Sbjct: 163 QSLSLFRRMLLVEGTKPDQVTAGAVLSGCAHMGCFGLFAGKSVHGYIVKNGWELNVEIGA 222
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LV+MY K G L A VFE M E++V+SW
Sbjct: 223 ALVNMYAKGGVLRNAATVFELMDERDVMSW 252
>ref|XP_007213915.1| hypothetical protein PRUPE_ppa005675mg [Prunus persica]
gi|462409780|gb|EMJ15114.1| hypothetical protein
PRUPE_ppa005675mg [Prunus persica]
Length = 448
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +3
Query: 9 LRLFREMMVYEE--FKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
L LFR M++ E +PD SVLS CA MG+ GLL+G+++HGF+ KN W+L VELGT
Sbjct: 174 LLLFRSMVMNENEGIRPDGGIAVSVLSSCARMGTHGLLLGKSVHGFMVKNHWELNVELGT 233
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LVDMY KC L A RVFE M+E++V SW
Sbjct: 234 TLVDMYAKCRSLKGAARVFELMQERSVTSW 263
>ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat
[Medicago truncatula] gi|355501123|gb|AES82326.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 417
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/90 (50%), Positives = 58/90 (64%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
Q L LFR M+ E KPDQ+ VLS CA + GLL G+++HG++ KNGW+L VE+G
Sbjct: 148 QSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHGLLGGKSVHGYIVKNGWELNVEIGA 207
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
LV+MY K G L A V E M E++V SW
Sbjct: 208 ALVNMYAKGGVLRNAAMVLELMDERDVTSW 237
>emb|CBI27247.3| unnamed protein product [Vitis vinifera]
Length = 268
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Frame = +3
Query: 81 SKCAAMGSLGLLV--GRALHGFVEKNGWKLTVELGTLLVDMYTKCGFLSAAFRVFERMKE 254
+KC G+L L+ G ++HGF KNGW+L+V+LGT+LVDMY KCGFL +AFRVF+ M+E
Sbjct: 23 NKCHINGNLHTLIPKGGSIHGFTAKNGWELSVDLGTVLVDMYAKCGFLKSAFRVFDLMQE 82
Query: 255 KNVVSW 272
KNV SW
Sbjct: 83 KNVASW 88
>ref|XP_007043745.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508707680|gb|EOX99576.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 558
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/88 (47%), Positives = 62/88 (70%)
Frame = +3
Query: 9 LRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTLL 188
L LF+EM + E FKPD++T+ SV+S +++G+L L G+ + FV + G KLTV LGT L
Sbjct: 170 LGLFQEMQLLESFKPDEVTMLSVISAVSSLGALEL--GKWVDAFVFRTGLKLTVSLGTAL 227
Query: 189 VDMYTKCGFLSAAFRVFERMKEKNVVSW 272
+DMY++CG + A +VF M KNV++W
Sbjct: 228 IDMYSRCGSVDNAIQVFNEMTVKNVLTW 255
>ref|XP_006421829.1| hypothetical protein CICLE_v10004587mg [Citrus clementina]
gi|557523702|gb|ESR35069.1| hypothetical protein
CICLE_v10004587mg [Citrus clementina]
Length = 600
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/90 (46%), Positives = 64/90 (71%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
+ ++LFREMM+ + KPD+ITL +VLS CA +GSL + G+A+H +++++G K + LG
Sbjct: 332 EAVKLFREMML-AKVKPDEITLATVLSACAHIGSLDM--GKAIHDYIKRHGTKCDLYLGN 388
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
L+DMY KCG + A VF M++K+ VSW
Sbjct: 389 SLIDMYCKCGVVENALVVFHEMEKKDSVSW 418
>ref|XP_006494379.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Citrus sinensis]
Length = 600
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/90 (46%), Positives = 63/90 (70%)
Frame = +3
Query: 3 QGLRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGT 182
+ ++LFREMM+ + KPD+ITL +VLS CA +GSL + G A+H +++++G K + LG
Sbjct: 332 EAVKLFREMML-AKVKPDEITLATVLSACAHIGSLDM--GEAIHDYIKRHGTKCDLYLGN 388
Query: 183 LLVDMYTKCGFLSAAFRVFERMKEKNVVSW 272
L+DMY KCG + A VF M++K+ VSW
Sbjct: 389 SLIDMYCKCGVVENALVVFHEMEKKDSVSW 418
>gb|EXC11892.1| hypothetical protein L484_005353 [Morus notabilis]
Length = 617
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +3
Query: 9 LRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTLL 188
++LF+EMM + KPD+IT+ SVLS CA +GSL VG A+H F+ +G K + +G L
Sbjct: 336 VKLFQEMMA-AKVKPDEITVASVLSACAHLGSLD--VGEAVHDFIINHGVKADICVGNTL 392
Query: 189 VDMYTKCGFLSAAFRVFERMKEKNVVSW 272
+DMY KCG A +VF+ MK K+ VSW
Sbjct: 393 IDMYCKCGLAEKALKVFQEMKAKDSVSW 420
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +3
Query: 9 LRLFREMMVYEEFKPDQITLGSVLSKCAAMGSLGLLVGRALHGFVEKNGWKLTVELGTLL 188
L LFREM V + D +T+ V+ C+ +G + +L ++E+N + V LG +
Sbjct: 204 LGLFREMKVVN-VRADSVTIMKVILACSYLGEYE--IADSLVKYIEENSIGVNVYLGNTI 260
Query: 189 VDMYTKCGFLSAAFRVFERMKEKNVVSW 272
+DMY + G ++ A VF+RM+E+N+VSW
Sbjct: 261 IDMYGRRGLVNFARGVFDRMRERNIVSW 288