BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00043523
         (266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360760.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_004247672.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   113   3e-23
ref|XP_006300817.1| hypothetical protein CARUB_v10019902mg [Caps...   112   5e-23
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   112   5e-23
ref|XP_006351115.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
gb|EYU17418.1| hypothetical protein MIMGU_mgv1a018997mg, partial...   110   3e-22
ref|XP_004301491.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
gb|EXC31027.1| hypothetical protein L484_021329 [Morus notabilis]     109   3e-22
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...   109   5e-22
ref|XP_006478378.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|NP_177305.1| pentatricopeptide repeat-containing protein [Ar...   108   8e-22
ref|XP_006390765.1| hypothetical protein EUTSA_v10019500mg [Eutr...   107   2e-21
ref|XP_007022286.1| Tetratricopeptide repeat (TPR)-like superfam...   106   3e-21
gb|EYU37341.1| hypothetical protein MIMGU_mgv1a0214771mg, partia...   103   3e-20
ref|XP_004516245.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
gb|EYU39130.1| hypothetical protein MIMGU_mgv1a019989mg, partial...   100   4e-19
ref|XP_004959155.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_007157004.1| hypothetical protein PHAVU_002G035600g [Phas...    99   6e-19

>ref|XP_006360760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Solanum tuberosum]
          Length = 739

 Score =  114 bits (285), Expect = 1e-23
 Identities = 50/87 (57%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MPV+D +SWNSMISGY SKGMW +AFE+F+RM   +A+ +++TWN IA GCL+  N+ G 
Sbjct: 263 MPVKDAVSWNSMISGYASKGMWGKAFEIFDRMRATDAEFDIITWNTIAGGCLKTGNFIGA 322

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L L+SQMR  G+ ++ V  LIGL ACS
Sbjct: 323 LKLLSQMRTCGIQLEPVATLIGLGACS 349


>ref|XP_004247672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Solanum lycopersicum]
          Length = 739

 Score =  114 bits (284), Expect = 2e-23
 Identities = 49/87 (56%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MPV+D +SWNSMISGY SKG W +AFE+F+RM   +A+ +++TWN IA GCL+  N+ G 
Sbjct: 263 MPVKDAVSWNSMISGYASKGRWSKAFEIFDRMRATDAEFDIITWNTIAGGCLKTGNFVGA 322

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L L+SQMR  G+ +++V  LIGL ACS
Sbjct: 323 LKLLSQMRTCGIQLETVATLIGLGACS 349


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  113 bits (282), Expect = 3e-23
 Identities = 50/87 (57%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           +P RD +SWNSMIS Y S GMW +AFELF  MW E+ ++N++ WN IA G L+  NYKG 
Sbjct: 336 IPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGA 395

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L+L+SQMR  G  +DSV ++IGL ACS
Sbjct: 396 LELLSQMRKXGSHLDSVALIIGLGACS 422


>ref|XP_006300817.1| hypothetical protein CARUB_v10019902mg [Capsella rubella]
           gi|482569527|gb|EOA33715.1| hypothetical protein
           CARUB_v10019902mg [Capsella rubella]
          Length = 678

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/87 (56%), Positives = 65/87 (74%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           M  RD +SWN++IS Y S+GMW +AFELF++MW   A+V+V+TWNII+ GCL   NY G 
Sbjct: 205 MSERDTVSWNAVISCYASEGMWSEAFELFDKMWFSGAEVSVITWNIISGGCLHTGNYVGA 264

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L L+S+MR+   S+D V V+IGL ACS
Sbjct: 265 LGLVSRMRHFPASLDPVAVIIGLKACS 291


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  112 bits (280), Expect = 5e-23
 Identities = 50/87 (57%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           +P RD +SWNSMIS Y S GMW +AFELF  MW E+ ++N++ WN IA G L+  NYKG 
Sbjct: 262 IPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGA 321

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L+L+SQMR  G  +DSV ++IGL ACS
Sbjct: 322 LELLSQMRKCGSHLDSVALIIGLGACS 348


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/84 (58%), Positives = 65/84 (77%)
 Frame = +2

Query: 11  RDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGVLDL 190
           RD +SWN+MISGY SKGMW++AFELF +M VE  ++N++TWN IA GC+Q  N++  L+L
Sbjct: 258 RDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALEL 317

Query: 191 ISQMRYRGVSMDSVTVLIGLAACS 262
           +S MR  G+ MDSV  +IGL ACS
Sbjct: 318 LSHMRSYGIDMDSVATIIGLGACS 341


>ref|XP_006351115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like isoform X1 [Solanum tuberosum]
           gi|565368979|ref|XP_006351116.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like isoform X2 [Solanum tuberosum]
          Length = 737

 Score =  110 bits (276), Expect = 2e-22
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           M ++D +SWNSMISGY SKGMW +AFELF++M    A+++++TWN IA GCL+  N+ G 
Sbjct: 262 MAIKDAVSWNSMISGYASKGMWSKAFELFDKMRAAGAEMDIITWNTIAGGCLKTGNFIGA 321

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L L SQMR  G+ ++ V  LIGL ACS
Sbjct: 322 LKLFSQMRTCGIQLEPVATLIGLGACS 348


>gb|EYU17418.1| hypothetical protein MIMGU_mgv1a018997mg, partial [Mimulus
           guttatus]
          Length = 616

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/88 (56%), Positives = 65/88 (73%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           +P +D +SWNS+IS Y S+GMW+QAFELFE M V   ++N++TWN IA GCL+  N+ G 
Sbjct: 260 IPDKDEVSWNSIISQYASRGMWDQAFELFESMRVAGMKLNIITWNTIAGGCLRTGNFVGA 319

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACSQ 265
           L LI QMR  GV +D V V+IGL ACS+
Sbjct: 320 LKLIRQMRTGGVRLDHVAVIIGLGACSR 347


>ref|XP_004301491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Fragaria vesca subsp. vesca]
          Length = 722

 Score =  110 bits (274), Expect = 3e-22
 Identities = 49/87 (56%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MP RD ISWNSMIS Y SKGMW +AFELF  + +E  +++++TWN IA GCL+  N KG 
Sbjct: 252 MPQRDTISWNSMISCYASKGMWNEAFELFGNLQMEGTEISIITWNTIAGGCLRTGNIKGA 311

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L+L+SQMR  G+ +DSV   +GL+A S
Sbjct: 312 LELLSQMRVCGIQLDSVAFSVGLSASS 338


>gb|EXC31027.1| hypothetical protein L484_021329 [Morus notabilis]
          Length = 683

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/87 (56%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MP RD ISWN+MIS Y S+GMW++AFELFE + VE  ++N+VTWN IA GCL++  +   
Sbjct: 210 MPERDGISWNTMISAYASRGMWKEAFELFESVRVEGREINIVTWNTIAGGCLRIGKFSLA 269

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L+L+SQ R  G+ +DSV ++IGL ACS
Sbjct: 270 LELLSQRRACGIRLDSVGLIIGLGACS 296


>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  109 bits (272), Expect = 5e-22
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = +2

Query: 11  RDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGVLDL 190
           RD +SWNSMIS Y+S+GMW +AFELFE M  +  ++NVVTWNIIA GCL+V N+   L L
Sbjct: 244 RDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKL 303

Query: 191 ISQMRYRGVSMDSVTVLIGLAACS 262
           +SQMR  G+ +D V ++IGL ACS
Sbjct: 304 LSQMRNFGIHLDDVAMIIGLGACS 327


>ref|XP_006478378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Citrus sinensis]
          Length = 710

 Score =  108 bits (271), Expect = 6e-22
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = +2

Query: 11  RDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGVLDL 190
           RD +SWN+MIS Y SKG+W++AF++F  M  E  +VNV+TWN IA GCL+  N+KGVL+L
Sbjct: 238 RDAVSWNTMISAYASKGLWKEAFQMFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLEL 297

Query: 191 ISQMRYRGVSMDSVTVLIGLAACS 262
           +S+MR +   +DSV  +IGL ACS
Sbjct: 298 LSRMRTQETYLDSVATVIGLGACS 321


>ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71490 gi|12323739|gb|AAG51835.1|AC016163_24 unknown
           protein; 40702-42747 [Arabidopsis thaliana]
           gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis
           thaliana] gi|56790238|gb|AAW30036.1| At1g71490
           [Arabidopsis thaliana] gi|332197086|gb|AEE35207.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 681

 Score =  108 bits (270), Expect = 8e-22
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = +2

Query: 11  RDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGVLDL 190
           RD +SWN++I+ Y S+GMW +AFELF++MW    +V+V+TWNII+ GCLQ  NY G L L
Sbjct: 208 RDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGL 267

Query: 191 ISQMRYRGVSMDSVTVLIGLAACS 262
           IS+MR    S+D V ++IGL ACS
Sbjct: 268 ISRMRNFPTSLDPVAMIIGLKACS 291


>ref|XP_006390765.1| hypothetical protein EUTSA_v10019500mg [Eutrema salsugineum]
           gi|557087199|gb|ESQ28051.1| hypothetical protein
           EUTSA_v10019500mg [Eutrema salsugineum]
          Length = 724

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/87 (55%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MP RD +SWN++IS Y S+GMW +AFELF++M     +V+V+TWNII+ GCL   NY G 
Sbjct: 248 MPERDAVSWNAVISCYASEGMWSEAFELFDQMGFSGVEVSVITWNIISGGCLHTGNYAGA 307

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L L+S+MR    S+D V V+IGL ACS
Sbjct: 308 LGLVSRMRNFPTSLDPVAVIIGLKACS 334


>ref|XP_007022286.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508721914|gb|EOY13811.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 739

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/87 (54%), Positives = 65/87 (74%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MP RD ISWN+MI+ Y SKGMW +AF+LF+ M  E+ ++N +TWN I  GCL+  N++G 
Sbjct: 264 MPERDDISWNAMINCYASKGMWGEAFKLFDCMRAEDIELNFITWNTITGGCLRTGNFQGS 323

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L+L+SQMR  G+ +D V ++IGL ACS
Sbjct: 324 LELLSQMRSSGIHLDPVAMIIGLGACS 350


>gb|EYU37341.1| hypothetical protein MIMGU_mgv1a0214771mg, partial [Mimulus
           guttatus]
          Length = 300

 Score =  103 bits (257), Expect = 3e-20
 Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           +P +D  SWNS+IS + S+GMW+Q+FELFE M V N ++N++TWNIIA GCL+  N+ G 
Sbjct: 162 IPDKDEFSWNSIISEFASRGMWDQSFELFESMRVANMKLNIITWNIIAGGCLRTGNFVGA 221

Query: 182 LDL-ISQMRYRGVSMDSVTVLIGLAACSQ 265
           L L I Q R  GV +D V V+IGL ACS+
Sbjct: 222 LKLIIRQRRTDGVRLDHVAVIIGLGACSR 250


>ref|XP_004516245.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cicer arietinum]
          Length = 684

 Score =  102 bits (255), Expect = 4e-20
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           M VRD +SWN++IS Y S+GMWE+AF LF RM  E  ++N++ WN IA GCL  AN+KG 
Sbjct: 204 MSVRDDVSWNTIISCYASRGMWEEAFRLFGRMQEEGVEMNIIIWNTIAGGCLHSANFKGA 263

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L ++SQMR   V +DSV +++GL ACS
Sbjct: 264 LKMLSQMRML-VRLDSVAMVVGLNACS 289


>gb|EYU39130.1| hypothetical protein MIMGU_mgv1a019989mg, partial [Mimulus
           guttatus]
          Length = 765

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 44/85 (51%), Positives = 60/85 (70%)
 Frame = +2

Query: 8   VRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGVLD 187
           V+D +SWNS+IS Y+S+GMW QAFELFE M     ++N++ WN +A GCL+  N++  L+
Sbjct: 240 VKDEVSWNSIISAYSSRGMWGQAFELFEGMQEAGVKLNIIIWNTVAGGCLRTGNFERALE 299

Query: 188 LISQMRYRGVSMDSVTVLIGLAACS 262
           LI  MR  G  +D V V+IGL ACS
Sbjct: 300 LICTMRISGNQLDPVAVIIGLGACS 324


>ref|XP_004959155.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Setaria italica]
          Length = 697

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 47/85 (55%), Positives = 60/85 (70%)
 Frame = +2

Query: 11  RDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGVLDL 190
           RDV+SWNSMISGY + G+W +A ELF RM  E A+VN VTWN IA G +Q+ +YK  + L
Sbjct: 229 RDVVSWNSMISGYAASGLWREAVELFHRMRAEGAEVNSVTWNTIAGGYIQMRDYKAAVRL 288

Query: 191 ISQMRYRGVSMDSVTVLIGLAACSQ 265
           I  M   G  +D VT++IGL ACS+
Sbjct: 289 ICDMVRGGAGVDFVTLVIGLNACSR 313


>ref|XP_007157004.1| hypothetical protein PHAVU_002G035600g [Phaseolus vulgaris]
           gi|561030419|gb|ESW28998.1| hypothetical protein
           PHAVU_002G035600g [Phaseolus vulgaris]
          Length = 730

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/87 (54%), Positives = 61/87 (70%)
 Frame = +2

Query: 2   MPVRDVISWNSMISGYTSKGMWEQAFELFERMWVENAQVNVVTWNIIARGCLQVANYKGV 181
           MP RD +SW++MIS Y S+GMW++AF+LF  M  E  Q NV+ WN IA GCL + N+ G 
Sbjct: 250 MPTRDAVSWHTMISCYASRGMWKEAFQLFGSMQEEGIQRNVIIWNTIAGGCLHMGNFGGA 309

Query: 182 LDLISQMRYRGVSMDSVTVLIGLAACS 262
           L LISQMR   V +D+V  ++GL ACS
Sbjct: 310 LKLISQMR-TSVPLDAVAFVVGLNACS 335