BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042966
         (435 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containi...   106   3e-21
ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citr...   102   4e-20
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...   102   7e-20
ref|XP_006307006.1| hypothetical protein CARUB_v10008584mg [Caps...    97   2e-18
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]    92   8e-17
ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...    91   1e-16
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16
ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_006344297.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_006417124.1| hypothetical protein EUTSA_v10009406mg [Eutr...    84   2e-14
ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prun...    81   2e-13
ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phas...    80   3e-13
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...    79   9e-13
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr...    78   1e-12

>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  107 bits (266), Expect = 2e-21
 Identities = 47/95 (49%), Positives = 68/95 (71%)
 Frame = -1

Query: 285 PSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQ 106
           P  R +EE FISLLQ+C+  +Q+ Q+Q QII  G + NE++ PKLV+ C    ++ YARQ
Sbjct: 32  PPHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQ 91

Query: 105 IFDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           +FD I +PN+ LWN+M +GYA++E +RE + LF Q
Sbjct: 92  LFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQ 126


>ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 590

 Score =  106 bits (265), Expect = 3e-21
 Identities = 46/88 (52%), Positives = 65/88 (73%)
 Frame = -1

Query: 270 VEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQIFDHI 91
           +EE FISLLQ+C+ ++++ Q+Q Q+   G  QN++VAPKLV+AC +  ++ YA Q+FD I
Sbjct: 4   LEEKFISLLQSCKTIKELHQIQAQVTLHGFSQNDYVAPKLVTACAELKRMAYAHQVFDQI 63

Query: 90  LEPNVLLWNAMLKGYAENEFFREALVLF 7
            EPN  LWNA+L+GYA NE  RE + LF
Sbjct: 64  PEPNFALWNALLRGYARNEGHREVVALF 91


>ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cicer arietinum]
          Length = 603

 Score =  104 bits (260), Expect = 1e-20
 Identities = 46/101 (45%), Positives = 70/101 (69%)
 Frame = -1

Query: 309 PLRLHHLLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDS 130
           PL    L P +R +E+ FISLL++C+    + Q+Q QI+T GLE N+FVAP  ++ C+  
Sbjct: 4   PLTKFMLNPVQRIIEDKFISLLRSCKSCEHLHQIQAQIVTHGLEHNDFVAPSFITTCSRL 63

Query: 129 SKLGYARQIFDHILEPNVLLWNAMLKGYAENEFFREALVLF 7
            ++ +AR++FD I EPN   WNAM +GY++NE  R+A++LF
Sbjct: 64  RRMQHARKLFDKIPEPNTATWNAMFRGYSQNEHHRDAVILF 104


>ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citrus clementina]
           gi|557551075|gb|ESR61704.1| hypothetical protein
           CICLE_v10017589mg [Citrus clementina]
          Length = 611

 Score =  102 bits (255), Expect = 4e-20
 Identities = 44/92 (47%), Positives = 66/92 (71%)
 Frame = -1

Query: 276 RQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQIFD 97
           R VEE  I LLQ+CR  + + Q+Q Q++T GLEQ++++ P++++AC    ++ YAR++FD
Sbjct: 23  RLVEEKLIYLLQSCRTTKHLHQIQTQVVTSGLEQSDYITPRIITACAQLKQMTYARKMFD 82

Query: 96  HILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
            I + NV+ WNAM  GYA+NEF R  +VLF Q
Sbjct: 83  KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 114


>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  102 bits (253), Expect = 7e-20
 Identities = 44/97 (45%), Positives = 69/97 (71%)
 Frame = -1

Query: 291 LLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYA 112
           L P +R VEE FI+LL++C++  ++ Q+Q QI+T GLE N+FVAP  ++ C+   ++ +A
Sbjct: 4   LNPVQRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHA 63

Query: 111 RQIFDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           R++FD I +PN   WNAM +GY +N   R+ +VLFG+
Sbjct: 64  RKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGE 100


>ref|XP_006307006.1| hypothetical protein CARUB_v10008584mg [Capsella rubella]
           gi|482575717|gb|EOA39904.1| hypothetical protein
           CARUB_v10008584mg [Capsella rubella]
          Length = 625

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 44/105 (41%), Positives = 73/105 (69%)
 Frame = -1

Query: 321 IAKIPLRLHHLLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSA 142
           IA++ L   +  P KR +EE  IS L++C+  +Q+ Q+Q+Q ++  L  N++V P++V+A
Sbjct: 24  IARVSLVSAYKSP-KRLLEEKLISFLESCKTQKQLLQIQSQTVSHELAHNDYVGPRIVAA 82

Query: 141 CTDSSKLGYARQIFDHILEPNVLLWNAMLKGYAENEFFREALVLF 7
           C   +++GYARQ+FD I +PNV +WNAM  GYA+ +  +E L+L+
Sbjct: 83  CCRITRIGYARQVFDGISQPNVSVWNAMFNGYAQRDLSKEVLLLY 127


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 42/99 (42%), Positives = 66/99 (66%)
 Frame = -1

Query: 297 HHLLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLG 118
           H  L + R + EN    +++C+  +Q+ Q+Q QII  G + NE++ PKLV+ C    ++ 
Sbjct: 95  HLRLTALRCLREN----MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMT 150

Query: 117 YARQIFDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           YARQ+FD I +PN+ LWN+M +GYA++E +RE + LF Q
Sbjct: 151 YARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQ 189


>ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 652

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/116 (39%), Positives = 73/116 (62%)
 Frame = -1

Query: 348 SETHRSSVFIAKIPLRLHHLLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNE 169
           SE  R++ F     L   H    +  +EE+FISLL++C+ +  +++VQ QIIT G + N 
Sbjct: 43  SEWARNNTFFIDDTLTQKH---PRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNG 99

Query: 168 FVAPKLVSACTDSSKLGYARQIFDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           +VAP +V++     ++ +AR +FDH  +P V LWNA+ +GY  N F+RE + LFG+
Sbjct: 100 YVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGK 155


>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
 Frame = -1

Query: 333 SSVFIAKIPLRLHHLLPSK---RQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFV 163
           SS+F+ K   +    L  K   R +EE  ISLL +C+ L  + Q+Q+ II  GL+ N+++
Sbjct: 41  SSIFLLKKVAKFASTLSPKLPHRLLEEKIISLLYSCKTLNHLHQIQSHIINHGLQFNDYI 100

Query: 162 APKLVSACTDSSKLGYARQIFDHILEPNVLLWNAMLKGYAENEFFREALVLF 7
            PK++++     ++ +A ++FD I EPNV  WNAMLKGY+ N+  RE +VLF
Sbjct: 101 TPKIITSFALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVLF 152


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/90 (44%), Positives = 64/90 (71%)
 Frame = -1

Query: 270 VEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQIFDHI 91
           +EE+FISLL++C+ +  +++VQ QIIT G + N +VAP +V++     ++ +AR +FDH 
Sbjct: 24  LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 83

Query: 90  LEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
            +P V LWNA+ +GY  N F+RE + LFG+
Sbjct: 84  PDPKVELWNAISRGYFHNAFYREVVFLFGK 113


>ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform X1 [Citrus sinensis]
          Length = 587

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 39/82 (47%), Positives = 59/82 (71%)
 Frame = -1

Query: 246 LQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQIFDHILEPNVLLW 67
           L+T +HL QI   Q Q++T GLEQ++++ P++++AC    ++ YAR++FD I + NV+ W
Sbjct: 12  LETTKHLHQI---QTQVVTSGLEQSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68

Query: 66  NAMLKGYAENEFFREALVLFGQ 1
           NAM  GYA+NEF R  +VLF Q
Sbjct: 69  NAMFNGYAQNEFHRTVVVLFTQ 90


>ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 619

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 40/95 (42%), Positives = 59/95 (62%)
 Frame = -1

Query: 285 PSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQ 106
           P  R VE+ FISLL+TC    ++ Q+Q QI+T GLE N++V P  ++AC     +  AR+
Sbjct: 16  PLHRVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARR 75

Query: 105 IFDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           +FD   +PN   WNAM +GYA+     + +VLF +
Sbjct: 76  VFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFAR 110


>ref|XP_006344297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 610

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = -1

Query: 321 IAKIPLRLHHLLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSA 142
           IAKI + +  +    R +EE FISLLQ+C+   Q+K++Q QI T  +   +++ P L+S 
Sbjct: 9   IAKIAVNVGLIKTHHRILEEKFISLLQSCKTANQVKEIQTQITTQCVGYTKYIIPPLLSK 68

Query: 141 CTDSSKLGYARQIFDHILE-PNVLLWNAMLKGYAENEFFREALVLF 7
           C +  K+ YA Q+FD I +  +   WN M KGY +N+ +R+ +V F
Sbjct: 69  CMEFKKISYAHQVFDQIPDLQDASPWNIMFKGYIQNDMYRDVVVSF 114


>ref|XP_006417124.1| hypothetical protein EUTSA_v10009406mg [Eutrema salsugineum]
           gi|557094895|gb|ESQ35477.1| hypothetical protein
           EUTSA_v10009406mg [Eutrema salsugineum]
          Length = 583

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 34/73 (46%), Positives = 55/73 (75%)
 Frame = -1

Query: 225 RQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQIFDHILEPNVLLWNAMLKGY 46
           +++ Q+Q Q +  GLEQN++V P++V+AC   +++ YAR++FD I +PNV +WNAM  GY
Sbjct: 11  KKLLQIQAQTLIHGLEQNDYVGPRIVAACCRITRIDYARRVFDAISQPNVSVWNAMFNGY 70

Query: 45  AENEFFREALVLF 7
           A+ + +RE L+LF
Sbjct: 71  AQKDLYREVLLLF 83


>ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 621

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
 Frame = -1

Query: 321 IAKIPLRLHHLLPSKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSA 142
           IAKI + +  +    R +EE FISLLQ+C+   Q+K++Q QI    +   +++ P L+S 
Sbjct: 20  IAKIAVNVGLIKTHHRILEEKFISLLQSCKTTNQLKEIQTQITIQCVGYTKYIIPPLLSK 79

Query: 141 CTDSSKLGYARQIFDHILE-PNVLLWNAMLKGYAENEFFREALVLF 7
           C +  K+ YA Q+FD I +  +   WN M KGY +N+ +R+ +V F
Sbjct: 80  CMEFKKISYAHQVFDQIPDLQDASPWNIMFKGYIQNDMYRDVVVSF 125


>ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prunus persica]
           gi|462424209|gb|EMJ28472.1| hypothetical protein
           PRUPE_ppa017736mg [Prunus persica]
          Length = 544

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 35/94 (37%), Positives = 59/94 (62%)
 Frame = -1

Query: 282 SKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQI 103
           S R++E+ F+  L  C++   +K++  QI+ F L Q+ F+  K+V  C +S  LGYA  +
Sbjct: 9   SVRELEDFFVPTLLNCKNTSGLKKIHAQIVKFSLSQSNFLVTKMVDVCDNSGNLGYASLL 68

Query: 102 FDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           F  +LEPNV L+NAM++ Y  ++ +  A+ L+ Q
Sbjct: 69  FKQVLEPNVFLFNAMIRAYTHHQMYDLAVTLYKQ 102


>ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phaseolus vulgaris]
           gi|561029625|gb|ESW28265.1| hypothetical protein
           PHAVU_003G272400g [Phaseolus vulgaris]
          Length = 618

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 35/93 (37%), Positives = 59/93 (63%)
 Frame = -1

Query: 279 KRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQIF 100
           +R  EE  ISLL++C+   ++ Q+  QI+  GL+ N++V P  ++AC    ++G+AR++F
Sbjct: 18  QRVAEETLISLLRSCQTCTRLHQIHAQIVAHGLQGNDYVTPSFITACARLGRMGHARRVF 77

Query: 99  DHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           D   +PN   WN+M +G+A  E   + +VLF Q
Sbjct: 78  DRTAQPNGATWNSMFQGFALLESPFDVVVLFAQ 110


>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = -1

Query: 324 FIAKIPLRLHH--LLP-SKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPK 154
           F + +PL L H   +P S    +  F SLL    H R + Q+  Q++  GL ++ F+  K
Sbjct: 49  FYSSLPLPLDHSDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTK 108

Query: 153 LVSACTDSSKLGYARQIFDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
            V+A  +  ++GYAR++FD   EP+V LWNA+++GY+ + FF +A+ ++ +
Sbjct: 109 FVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSR 159


>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Citrus sinensis]
          Length = 541

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 32/94 (34%), Positives = 58/94 (61%)
 Frame = -1

Query: 282 SKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQI 103
           S +++E+ F+ +LQ+C +L ++K++  QI+ + L Q+ F+  K++  C     L YA  +
Sbjct: 9   SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68

Query: 102 FDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           F  + EPNV L+NAM++ Y  N  +  A+ L+ Q
Sbjct: 69  FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102


>ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina]
           gi|557553822|gb|ESR63836.1| hypothetical protein
           CICLE_v10010742mg [Citrus clementina]
          Length = 605

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 32/94 (34%), Positives = 58/94 (61%)
 Frame = -1

Query: 282 SKRQVEENFISLLQTCRHLRQIKQVQNQIITFGLEQNEFVAPKLVSACTDSSKLGYARQI 103
           S +++E+ F+ +LQ+C +L ++K++  QI+ + L Q+ F+  K++  C     L YA  +
Sbjct: 9   SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68

Query: 102 FDHILEPNVLLWNAMLKGYAENEFFREALVLFGQ 1
           F  + EPNV L+NAM++ Y  N  +  A+ L+ Q
Sbjct: 69  FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102