BLASTX nr result

ID: Cocculus23_contig00042373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042373
         (238 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34885.3| unnamed protein product [Vitis vinifera]               60   3e-07
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...    60   4e-07
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]    60   4e-07
ref|XP_006446557.1| hypothetical protein CICLE_v10017927mg, part...    59   5e-07
ref|XP_007031543.1| Pentatricopeptide repeat superfamily protein...    59   7e-07
ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +1

Query: 1   DKGLKKVGGRSWIEVRNEVHSFHCEDGHQLLSSGICGILELLTSQMV 141
           +KGLKK GG SW+EVRN+VHSF+ EDG    S+ I G L+LL S+M+
Sbjct: 680 EKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEML 726


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = +1

Query: 1   DKGLKKVGGRSWIEVRNEVHSFHCEDGHQLLSSGICGILELLTSQM 138
           +KGLKK GG SW+EVRN+VHSF+ EDG    S+ I G L+LL S+M
Sbjct: 680 EKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +1

Query: 1   DKGLKKVGGRSWIEVRNEVHSFHCEDGHQLLSSGICGILELLTSQMV 141
           +KGLKK GG SW+EVRN+VHSF+ EDG    S  I G L+LL S+M+
Sbjct: 680 EKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEML 726


>ref|XP_006446557.1| hypothetical protein CICLE_v10017927mg, partial [Citrus clementina]
           gi|557549168|gb|ESR59797.1| hypothetical protein
           CICLE_v10017927mg, partial [Citrus clementina]
          Length = 735

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +1

Query: 1   DKGLKKVGGRSWIEVRNEVHSFHCEDGHQLLSSGICGILELLTSQMVDVQS 153
           +KGL+K GG SW+EVRN+VH F+ EDG Q   + + G+LELL S+M+ V S
Sbjct: 642 EKGLRKSGGCSWVEVRNQVHFFYSEDGSQSQVTELHGVLELLMSEMLTVFS 692


>ref|XP_007031543.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508710572|gb|EOY02469.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 728

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 1   DKGLKKVGGRSWIEVRNEVHSFHCEDGHQLLSSGICGILELLTSQMV 141
           +KGLKK GG SW+EVRN VHSF+ EDG    S+ I  ILELL S+M+
Sbjct: 680 EKGLKKSGGCSWVEVRNHVHSFYSEDGTHSESAEIYDILELLRSEML 726


>ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Citrus sinensis]
          Length = 734

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = +1

Query: 1   DKGLKKVGGRSWIEVRNEVHSFHCEDGHQLLSSGICGILELLTSQMVDVQ 150
           +KGL+K GG SW+EVRN+VH F  EDG Q   + + G+LELL S+M+  Q
Sbjct: 682 EKGLRKSGGCSWVEVRNQVHFFFSEDGSQSQVTELHGVLELLMSEMLVCQ 731


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