BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042288
         (366 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
emb|CBI25349.3| unnamed protein product [Vitis vinifera]              108   1e-21
ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004241092.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_007011261.1| Pentatricopeptide repeat-containing protein,...   107   2e-21
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...   107   2e-21
ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, part...   107   2e-21
gb|EYU35195.1| hypothetical protein MIMGU_mgv1a024029mg, partial...    94   2e-17
ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arab...    88   1e-15
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...    87   2e-15
gb|EXB37797.1| hypothetical protein L484_002732 [Morus notabilis]      82   6e-14
gb|EYU26534.1| hypothetical protein MIMGU_mgv1a024701mg, partial...    80   2e-13
ref|XP_006295646.1| hypothetical protein CARUB_v10024761mg [Caps...    80   2e-13
ref|XP_006411338.1| hypothetical protein EUTSA_v10017587mg [Eutr...    80   4e-13
ref|XP_007159576.1| hypothetical protein PHAVU_002G249000g [Phas...    78   1e-12
ref|XP_007042234.1| Mitochondrial editing factor 21 [Theobroma c...    78   1e-12
ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prun...    77   3e-12
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...    76   4e-12

>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  108 bits (269), Expect = 1e-21
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P +GSNYV LLNLY E  +W++AANLR SMK +GLKK+PGCSWIE+K+  ++FFSGDSSS
Sbjct: 747 PARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSS 806

Query: 183 YLTLEIYETLNSLRDIMELDG 245
              +EIY+TL+SL+  ME  G
Sbjct: 807 TRRIEIYKTLSSLKSNMEGKG 827


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  108 bits (269), Expect = 1e-21
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P +GSNYV LLNLY E  +W++AANLR SMK +GLKK+PGCSWIE+K+  ++FFSGDSSS
Sbjct: 1152 PARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSS 1211

Query: 183  YLTLEIYETLNSLRDIMELDG 245
               +EIY+TL+SL+  ME  G
Sbjct: 1212 TRRIEIYKTLSSLKSNMEGKG 1232


>ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720-like
            [Solanum tuberosum]
          Length = 850

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/82 (64%), Positives = 65/82 (79%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P +GSNYVQLLNLY E G+ E+AA+LR  M+ KGLKKNPGCSWIE+K+   +F+S DSSS
Sbjct: 763  PNRGSNYVQLLNLYVEGGMREEAASLRTLMRQKGLKKNPGCSWIEVKNELEVFYSCDSSS 822

Query: 183  YLTLEIYETLNSLRDIMELDGN 248
              T+EIYETL SLR IM+  G+
Sbjct: 823  TKTIEIYETLQSLRSIMKKRGD 844


>ref|XP_004241092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720-like
            [Solanum lycopersicum]
          Length = 850

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/82 (63%), Positives = 64/82 (78%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P +GSNYVQLLNLY E G+ E+AA+LR  M+ KGLKKNPGCSWIE+K+   +F+S DSSS
Sbjct: 763  PNRGSNYVQLLNLYVEGGMREEAASLRALMRQKGLKKNPGCSWIEVKNELEVFYSSDSSS 822

Query: 183  YLTLEIYETLNSLRDIMELDGN 248
              T+EIYETL  LR IM+  G+
Sbjct: 823  TKTIEIYETLQGLRSIMKKKGD 844


>ref|XP_007011261.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508728174|gb|EOY20071.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 849

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P++GSNYVQLL+LY E GL +KAAN+R +MK +GLKKNPGCSWIE+++  ++FFSGDSSS
Sbjct: 760 PSRGSNYVQLLHLYGEAGLQDKAANIRATMKERGLKKNPGCSWIELRNKVDVFFSGDSSS 819

Query: 183 YLTLEIYETLNSLRDIME 236
             T+EIYE L+SL   ME
Sbjct: 820 LRTMEIYEILHSLGRNME 837


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score =  107 bits (267), Expect = 2e-21
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P+KGSNYVQLLNLY E  LW++ ANLR SMK KGLKK PGCSWIE+++  ++F+SGD SS
Sbjct: 744 PSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSS 803

Query: 183 YLTLEIYETLNSLR 224
            +T EIY+TL+SL+
Sbjct: 804 PITTEIYDTLSSLK 817


>ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, partial [Populus
           trichocarpa] gi|550325356|gb|EEE95266.2| hypothetical
           protein POPTR_0013s09430g, partial [Populus trichocarpa]
          Length = 792

 Score =  107 bits (266), Expect = 2e-21
 Identities = 53/81 (65%), Positives = 63/81 (77%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P++GSNYVQLLNLY E  L ++AANLR SMK KGLKK PGCSWIE+ +  ++FFSGDSSS
Sbjct: 704 PSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSS 763

Query: 183 YLTLEIYETLNSLRDIMELDG 245
             T+EIY+ LNSLR  M   G
Sbjct: 764 PRTIEIYDLLNSLRRNMRKKG 784


>gb|EYU35195.1| hypothetical protein MIMGU_mgv1a024029mg, partial [Mimulus
           guttatus]
          Length = 820

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/77 (59%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P  GS Y+QLLNLY E G+ EKAA LR  M+ KGL K PGCSWIE+K+  ++F+SGDSSS
Sbjct: 735 PESGSGYIQLLNLYVEMGMKEKAAKLRGVMREKGLTKVPGCSWIEVKNKVDVFYSGDSSS 794

Query: 183 YLTLEIYETLNSLRDIM 233
             T++IYETL+ L++ M
Sbjct: 795 LSTVKIYETLDILKNSM 811


>ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata] gi|297325726|gb|EFH56146.1| hypothetical protein
            ARALYDRAFT_903365 [Arabidopsis lyrata subsp. lyrata]
          Length = 1359

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/77 (55%), Positives = 54/77 (70%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P +GS YVQL+NLY E GL  +AA L   MK +GL+K PGCSWIE+ D  N+FFSG SSS
Sbjct: 1276 PERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSS 1335

Query: 183  YLTLEIYETLNSLRDIM 233
             +  EI++ LN L+  M
Sbjct: 1336 PIKAEIFKVLNRLKSNM 1352


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 52/77 (67%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P +GS YVQL+NLY E GL  +AA L   MK KGL K PGCSWIE+ D  N+FFSG SSS
Sbjct: 777  PERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSS 836

Query: 183  YLTLEIYETLNSLRDIM 233
             +  EI+  LN L+  M
Sbjct: 837  PMKAEIFNVLNRLKSNM 853


>gb|EXB37797.1| hypothetical protein L484_002732 [Morus notabilis]
          Length = 672

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/81 (48%), Positives = 53/81 (65%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P   +NYV L N+YAE G+W++ ANLR  +K +G++K PGCSWIE+    +MF  GD+S 
Sbjct: 500 PYSSANYVHLSNMYAEAGMWKEVANLRDLLKYRGIRKTPGCSWIEVNGKAHMFLGGDTSH 559

Query: 183 YLTLEIYETLNSLRDIMELDG 245
             T EIY  L SL + M+  G
Sbjct: 560 PQTREIYMFLESLPEKMKQAG 580


>gb|EYU26534.1| hypothetical protein MIMGU_mgv1a024701mg, partial [Mimulus
           guttatus]
          Length = 518

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/81 (48%), Positives = 51/81 (62%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P    NYV L N+YAE G+WE+  +LR  +K+K +KKNPGCSWIEM    ++F  GD+S 
Sbjct: 346 PENSGNYVILSNMYAEAGMWEEVDSLRGVLKSKCVKKNPGCSWIEMNGKAHLFLGGDASH 405

Query: 183 YLTLEIYETLNSLRDIMELDG 245
             T EIY  L  L + M+  G
Sbjct: 406 AQTREIYSFLEELPEKMKAAG 426


>ref|XP_006295646.1| hypothetical protein CARUB_v10024761mg [Capsella rubella]
            gi|482564354|gb|EOA28544.1| hypothetical protein
            CARUB_v10024761mg [Capsella rubella]
          Length = 858

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/77 (53%), Positives = 51/77 (66%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P + S YVQL+NLY E GL  +AA L   MK KGL+K PGCSWIE+ +    FFSG SSS
Sbjct: 775  PERSSAYVQLINLYKEAGLKNEAAKLLGEMKDKGLQKKPGCSWIEVSNRKYAFFSGGSSS 834

Query: 183  YLTLEIYETLNSLRDIM 233
             +  EI+  LN L++ M
Sbjct: 835  SVKAEIFNVLNRLKNNM 851


>ref|XP_006411338.1| hypothetical protein EUTSA_v10017587mg [Eutrema salsugineum]
            gi|557112507|gb|ESQ52791.1| hypothetical protein
            EUTSA_v10017587mg [Eutrema salsugineum]
          Length = 858

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 41/77 (53%), Positives = 52/77 (67%)
 Frame = +3

Query: 3    PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
            P +GSNYVQL+NLY E GL  +AA L   MK +GL+K PG S IE+    ++FFSG SSS
Sbjct: 775  PERGSNYVQLINLYMEAGLKNEAAKLLSEMKERGLQKKPGWSRIEISSMTHVFFSGGSSS 834

Query: 183  YLTLEIYETLNSLRDIM 233
             +  EI+  LNSL+  M
Sbjct: 835  LMAAEIFNVLNSLKSNM 851


>ref|XP_007159576.1| hypothetical protein PHAVU_002G249000g [Phaseolus vulgaris]
           gi|561032991|gb|ESW31570.1| hypothetical protein
           PHAVU_002G249000g [Phaseolus vulgaris]
          Length = 810

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/79 (46%), Positives = 49/79 (62%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P    NYV L NLYA  G W   A  R SMK  G+KK+PGCSWIE +DG ++F + D + 
Sbjct: 726 PNNPGNYVMLANLYASVGKWHYLAQTRQSMKDMGMKKSPGCSWIEDRDGIHVFVASDKTH 785

Query: 183 YLTLEIYETLNSLRDIMEL 239
             T +IY  LNSL +++ +
Sbjct: 786 KRTDDIYSILNSLTNLIRM 804


>ref|XP_007042234.1| Mitochondrial editing factor 21 [Theobroma cacao]
           gi|508706169|gb|EOX98065.1| Mitochondrial editing factor
           21 [Theobroma cacao]
          Length = 613

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P    NYV L NLYAE G+W++A  LR  +K +G+KKNPGCSW E+    + F  GD+S 
Sbjct: 501 PENSGNYVMLSNLYAEAGMWKEADKLRAHLKCQGIKKNPGCSWTEINGKAHFFLGGDTSH 560

Query: 183 YLTLEIYETLNSLRDIMELDG 245
               EIY  L +L + ++  G
Sbjct: 561 PQAKEIYNLLEALLEKIKAAG 581


>ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Fragaria vesca subsp. vesca]
          Length = 631

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P    NYV L N+YAE G+W++   LRI +K++G+KK+PGCSWIE+    ++F  GD+S 
Sbjct: 397 PDNSGNYVLLSNIYAEAGMWKEVDKLRILLKSQGMKKSPGCSWIEVNGKAHLFLGGDTSH 456

Query: 183 YLTLEIYETLNSLRDIMELDG 245
               E+Y  L  L   M+  G
Sbjct: 457 PQAKEVYMLLEELPKKMKAAG 477


>ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 893

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/81 (43%), Positives = 53/81 (65%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P   S+YV L N+Y+  GLWEKA ++R  MK  G++K PGCSWIE +D  + F +GD S 
Sbjct: 721 PDVASHYVLLSNIYSSSGLWEKAMDIRRKMKEMGVRKEPGCSWIEFEDEVHKFLAGDMSH 780

Query: 183 YLTLEIYETLNSLRDIMELDG 245
             + +++E L +L + M+ +G
Sbjct: 781 PQSEQLHEYLETLSERMKKEG 801


>ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
           gi|462399953|gb|EMJ05621.1| hypothetical protein
           PRUPE_ppb002215mg [Prunus persica]
          Length = 634

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/81 (44%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P K   Y+ L N+YA  G W +AA +R+ MK KGLKK PGCSWIE+ +  ++F  GD S 
Sbjct: 540 PEKAGTYLLLCNIYASSGKWREAAKIRMKMKEKGLKKQPGCSWIEVGNKVHVFVVGDKSH 599

Query: 183 YLTLEIYETLNSLRDIMELDG 245
           Y +  IY  + +L + M+  G
Sbjct: 600 YQSELIYSLIYNLHERMKKIG 620


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   PTKGSNYVQLLNLYAEEGLWEKAANLRISMKAKGLKKNPGCSWIEMKDGHNMFFSGDSSS 182
           P    NYV L NLYAE G+WE+   LR  +K +G+KK+PGCSWIE+    ++F   D S 
Sbjct: 517 PDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSH 576

Query: 183 YLTLEIYETLNSLRDIMELDG 245
               EIY+ L +L + +++ G
Sbjct: 577 PQAKEIYKFLEALPEKIKMAG 597