BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00042230
         (357 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                60   4e-19
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    57   5e-17
ref|XP_006372009.1| hypothetical protein POPTR_0018s07320g [Popu...    53   3e-10
ref|XP_006369690.1| hypothetical protein POPTR_0001s29060g [Popu...    57   4e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 60.5 bits (145), Expect(3) = 4e-19
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 340 MARERDDALQSISVRLDTKNYSYWSYVMRNF 248
           MA ERDD+LQS+SVRLD KNYSYWSYVMRNF
Sbjct: 1   MATERDDSLQSVSVRLDGKNYSYWSYVMRNF 31



 Score = 58.2 bits (139), Expect(3) = 4e-19
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -1

Query: 159 LETWDTNNFKIITWINNSVGHLIGMQLAKYKMTKDVW 49
           ++TW+ NN KIITWINN V H IG QLAKY+  K+VW
Sbjct: 59  IDTWEANNAKIITWINNYVEHSIGTQLAKYETAKEVW 95



 Score = 21.6 bits (44), Expect(3) = 4e-19
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 251 FLKGKKLRSYVTRVSLKP 198
           FLKGKK+  YV+   + P
Sbjct: 31  FLKGKKMWGYVSGTYVVP 48


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 57.4 bits (137), Expect(2) = 5e-17
 Identities = 31/52 (59%), Positives = 34/52 (65%)
 Frame = -3

Query: 340 MARERDDALQSISVRLDTKNYSYWSYVMRNF*RERS*GVMSLEYPSNLLIKP 185
           M  ERDD+ QSISVRLD  NYSYWSYVMRNF +    G     Y S +L KP
Sbjct: 1   MVGERDDSXQSISVRLDGNNYSYWSYVMRNFLK----GKXMXGYVSGVLSKP 48



 Score = 55.8 bits (133), Expect(2) = 5e-17
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -1

Query: 189 NQTNDKYINLLETWDTNNFKIITWINNSVGHLIGMQLAKYKMTKDVW 49
           N  ++KYI++LE+ + NN KI+  INN   H IG+QLAKY++ K VW
Sbjct: 50  NDRDEKYIDMLESXEANNSKIJIXINNFXEHSIGIQLAKYEIAKQVW 96


>ref|XP_006372009.1| hypothetical protein POPTR_0018s07320g [Populus trichocarpa]
           gi|550318265|gb|ERP49806.1| hypothetical protein
           POPTR_0018s07320g [Populus trichocarpa]
          Length = 280

 Score = 53.1 bits (126), Expect(2) = 3e-10
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 340 MARERDDALQSISVRLDTKNYSYWSYVMRNF 248
           MA E+DD+LQ +SVRLD KNY YWSYV+RNF
Sbjct: 1   MATEKDDSLQLVSVRLDGKNYLYWSYVIRNF 31



 Score = 37.4 bits (85), Expect(2) = 3e-10
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -1

Query: 183 TNDKYINLLETWDTNNFKIITWINNSVGHLIGM--QLAKYKMTK 58
           T +    L++ W  N  KIITWINN V H I +  QLA  K  K
Sbjct: 51  TEEGDATLIDRWKANKAKIITWINNFVEHFIDLWDQLALTKSAK 94


>ref|XP_006369690.1| hypothetical protein POPTR_0001s29060g [Populus trichocarpa]
           gi|550348439|gb|ERP66259.1| hypothetical protein
           POPTR_0001s29060g [Populus trichocarpa]
          Length = 116

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -3

Query: 340 MARERDDALQSISVRLDTKNYSYWSYVMRNF 248
           MA +RDD+LQ +SVRLD KNYSYWSYVMRNF
Sbjct: 1   MATKRDDSLQYVSVRLDGKNYSYWSYVMRNF 31