BLASTX nr result
ID: Cocculus23_contig00042123
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00042123
(639 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 97 5e-18
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 97 5e-18
emb|CBI23000.3| unnamed protein product [Vitis vinifera] 74 3e-11
ref|XP_006597729.1| PREDICTED: putative E3 ubiquitin-protein lig... 67 6e-09
ref|XP_006597728.1| PREDICTED: putative E3 ubiquitin-protein lig... 66 8e-09
ref|XP_003566329.1| PREDICTED: uncharacterized protein LOC100827... 66 8e-09
ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein lig... 64 4e-08
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu... 63 9e-08
ref|XP_007138921.1| hypothetical protein PHAVU_009G249000g [Phas... 58 3e-06
ref|XP_006296841.1| hypothetical protein CARUB_v10012828mg [Caps... 57 5e-06
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1339
Score = 96.7 bits (239), Expect = 5e-18
Identities = 79/234 (33%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Frame = -3
Query: 628 EVTRQLARRYKHWLMYYQVMLIGGTSQRNKGCR--VAPL--------------LEDKSQC 497
E R+ A+RYK WLMYYQVM G T QR G ++P+ + S
Sbjct: 206 EAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQSPYNSMYGKSSSTKSSSSI 265
Query: 496 FQXXXXXXSHDQGEKVHPLDVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEV 317
++ +KVHPLD +E +I+ DKA +S + T +Q D L ++V
Sbjct: 266 AHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKAS----RDNTEIQ-DYRKALNNSDQV 320
Query: 316 YSGNSVENSEVKCLQDMLKESQSETPVS--IYSHNDSPEGSDSEEQGDSREGSVAIMKIK 143
+ +S +KCLQD+L ESQS+TP S + NDS +G DSE D + S+ +IK
Sbjct: 321 SRQDIKRSSNIKCLQDILMESQSDTPTSDDSFDDNDSADG-DSEAYADETQSSMEAARIK 379
Query: 142 ADNTQPKNSYRKPQATSSVSGPEPC---EVTTS----LISSRLLGSICDLNLPI 2
AD + + S ++ Q + +S P E+ + L S R S+ DLNL I
Sbjct: 380 ADQGRMEISDQRFQNSCCISTSFPPLHEEINEANIKKLFSGRFSRSLNDLNLSI 433
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 96.7 bits (239), Expect = 5e-18
Identities = 79/234 (33%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Frame = -3
Query: 628 EVTRQLARRYKHWLMYYQVMLIGGTSQRNKGCR--VAPL--------------LEDKSQC 497
E R+ A+RYK WLMYYQVM G T QR G ++P+ + S
Sbjct: 206 EAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQSPYNSXYGKSSSTKSSSSI 265
Query: 496 FQXXXXXXSHDQGEKVHPLDVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEV 317
++ +KVHPLD +E +I+ DKA +S + T +Q D L ++V
Sbjct: 266 AHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKAS----RDNTEIQ-DYRKALNNSDQV 320
Query: 316 YSGNSVENSEVKCLQDMLKESQSETPVS--IYSHNDSPEGSDSEEQGDSREGSVAIMKIK 143
+ +S +KCLQD+L ESQS+TP S + NDS +G DSE D + S+ +IK
Sbjct: 321 SRQDIKRSSNIKCLQDILMESQSDTPTSDDSFDDNDSADG-DSEAYADETQSSMEAARIK 379
Query: 142 ADNTQPKNSYRKPQATSSVSGPEPC---EVTTS----LISSRLLGSICDLNLPI 2
AD + + S ++ Q + +S P E+ + L S R S+ DLNL I
Sbjct: 380 ADQGRMEISDQRFQNSCCISTSFPPLHEEINEANIKKLFSGRFSRSLNDLNLSI 433
>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
Length = 1274
Score = 74.3 bits (181), Expect = 3e-11
Identities = 68/215 (31%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Frame = -3
Query: 619 RQLARRYKHWLMYYQVMLIGGTSQRNKGCRVAPLLEDKSQCFQXXXXXXSHDQGEKVHPL 440
R+ A+RYK WLMYYQVM G T QR G + + PL
Sbjct: 189 RETAKRYKSWLMYYQVMQYGETPQRPGG------------------------YNDILSPL 224
Query: 439 DVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEVYSGNSVENSEVKCLQDMLK 260
+ K S F + R + +D L ++V + +S +KCLQD+L
Sbjct: 225 YTQ-------MTKKISLFAGNYR---IIQDYRKALNNSDQVSRQDIKRSSNIKCLQDILM 274
Query: 259 ESQSETPVS--IYSHNDSPEGSDSEEQGDSREGSVAIMKIKADNTQPKNSYRKPQATSSV 86
ESQS+TP S + NDS +G DSE D + S+ +IKAD + + S ++ Q + +
Sbjct: 275 ESQSDTPTSDDSFDDNDSADG-DSEAYADETQSSMEAARIKADQGRMEISDQRFQNSCCI 333
Query: 85 SGPEPC---EVTTS----LISSRLLGSICDLNLPI 2
S P E+ + L S R S+ DLNL I
Sbjct: 334 STSFPPLHEEINEANIKKLFSGRFSRSLNDLNLSI 368
>ref|XP_006597729.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X2 [Glycine max]
Length = 1302
Score = 66.6 bits (161), Expect = 6e-09
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Frame = -3
Query: 634 IDEVTRQLARRYKHWLMYYQVMLIGGTSQRNKGC-RVAPLLEDKSQC-----FQXXXXXX 473
+DE +++AR+YK WL+YYQVML G T C + +P + C Q
Sbjct: 182 MDEAIKEVARKYKEWLVYYQVMLYGETPWWRSYCSKQSPRDVPNTSCVSSTSVQHEPRLK 241
Query: 472 SHDQGEKVHPLDVEEIM-IEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEV-YSGNSV 299
S + EKVHPLD + + E + K + + LK+L V Y G
Sbjct: 242 SCNMYEKVHPLDSQNVTHTMEHESKQFMDIAEYEGH-------KKALKQLKSVQYQGKED 294
Query: 298 EN-SEVKCLQDMLKESQSETPVSIYS-HNDSPEGSDSEEQGDSREGSVAIMKIKADNTQP 125
+ S +KC +DM+ E+ S+TPVS+ + + D + D E D R+ + KAD+ P
Sbjct: 295 QTMSSIKCFKDMMIEAHSKTPVSVDACYKDFRDRKDLENV-DDRKFYIQTTITKADDLPP 353
Query: 124 K 122
+
Sbjct: 354 E 354
>ref|XP_006597728.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like isoform
X1 [Glycine max]
Length = 1304
Score = 66.2 bits (160), Expect = 8e-09
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Frame = -3
Query: 634 IDEVTRQLARRYKHWLMYYQVMLIGGTSQRNKGC-RVAPLLED-------KSQCFQXXXX 479
+DE +++AR+YK WL+YYQVML G T C + +P D S Q
Sbjct: 182 MDEAIKEVARKYKEWLVYYQVMLYGETPWWRSYCSKQSPRSVDVPNTSCVSSTSVQHEPR 241
Query: 478 XXSHDQGEKVHPLDVEEIM-IEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEV-YSGN 305
S + EKVHPLD + + E + K + + LK+L V Y G
Sbjct: 242 LKSCNMYEKVHPLDSQNVTHTMEHESKQFMDIAEYEGH-------KKALKQLKSVQYQGK 294
Query: 304 SVEN-SEVKCLQDMLKESQSETPVSIYS-HNDSPEGSDSEEQGDSREGSVAIMKIKADNT 131
+ S +KC +DM+ E+ S+TPVS+ + + D + D E D R+ + KAD+
Sbjct: 295 EDQTMSSIKCFKDMMIEAHSKTPVSVDACYKDFRDRKDLENV-DDRKFYIQTTITKADDL 353
Query: 130 QPK 122
P+
Sbjct: 354 PPE 356
>ref|XP_003566329.1| PREDICTED: uncharacterized protein LOC100827665 [Brachypodium
distachyon]
Length = 1203
Score = 66.2 bits (160), Expect = 8e-09
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Frame = -3
Query: 628 EVTRQLARRYKHWLMYYQVMLIGGTSQRNKGCRVAPLLE-DKSQCFQXXXXXXSHDQGEK 452
+ R+ AR+YK WLMYY+V+ S + VA L+ KS D E+
Sbjct: 83 DAARRAARKYKDWLMYYRVV----ASSSAEAPDVAGYLDLGKSASSAIPRWPNVSDSEER 138
Query: 451 VHPLDVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEVYSGNSVE------NS 290
+ ++ ++K A+ S G+ L +L + S E +S
Sbjct: 139 -----TIQSVVGQVKSTAFVS----------NFSGHGGLAELKDFLSCADQEFDDAKGSS 183
Query: 289 EVKCLQDMLKESQSETPVSIYSHNDSPEGSDSEEQGDSREGSVAIMKIKAD 137
+ +CL +ML+ESQS++PVS YSH DS E SD+E + S IM I AD
Sbjct: 184 DSRCLHEMLEESQSDSPVSFYSHLDSTEASDNEAAPHEKGRSAKIMPIDAD 234
>ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like
[Fragaria vesca subsp. vesca]
Length = 1331
Score = 63.9 bits (154), Expect = 4e-08
Identities = 66/209 (31%), Positives = 83/209 (39%), Gaps = 20/209 (9%)
Frame = -3
Query: 631 DEVTRQLARRYKHWLMYYQVMLIGGTSQRNKGCRVAPLLEDKSQCFQXXXXXXSHDQGE- 455
DE T Q+AR Y+ WLMYY+VML G T Q G L DK + D
Sbjct: 208 DEATMQMARIYRDWLMYYKVMLYGETPQGQGGGYRDILSPDKESIYSLHGRSNRLDYSNK 267
Query: 454 --------------KVHPLDVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEV 317
KVHPLD E I E K + L D N + V
Sbjct: 268 TGHEYNLHTQWNYGKVHPLDPHEDSIIEDGLKTSIHISEFEEYGKLTNDLNPATEL--HV 325
Query: 316 YSGNSVENSEVKCLQDMLKESQSETPVSI-----YSHNDSPEGSDSEEQGDSREGSVAIM 152
+ N +K LQD+L +SQS++P S+ YS +D ++ D E
Sbjct: 326 KTREVQRNLSIKRLQDVLDDSQSDSPTSVDSCSDYSAHDIESEIFVKQVIDGGECLSRTA 385
Query: 151 KIKADNTQPKNSYRKPQATSSVSGPEPCE 65
I AD +K QA SS S PE CE
Sbjct: 386 SIGADFP------KKLQAPSSTSDPE-CE 407
>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
gi|223544025|gb|EEF45551.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 1357
Score = 62.8 bits (151), Expect = 9e-08
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Frame = -3
Query: 634 IDEVTRQLARRYKHWLMYYQVMLIGGTSQRNKGCRVAPLLEDKSQCFQXXXXXXSHDQ-- 461
I++ R++ARRYKHWL YYQVML G T Q + CR + D+SQ F +
Sbjct: 203 INDAIREIARRYKHWLTYYQVMLYGETPQWH--CRSS--YNDESQDFWQVSNSSDSSELI 258
Query: 460 ----------GEKVHPLDVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNAL---LKKLNE 320
EKVHPLD + + DK T + + D AL + L
Sbjct: 259 EQERCSQTYKHEKVHPLDSKAYPANDKADKP----KTCREIQEIGHDSEALNHFNQSLEL 314
Query: 319 VYSGNSVEN-SEVKCLQDMLKESQSETPVSIYS 224
EN + +K LQ++L +SQS+TP S+ S
Sbjct: 315 KIRTTKQENYTSIKRLQEVLMDSQSDTPTSVNS 347
>ref|XP_007138921.1| hypothetical protein PHAVU_009G249000g [Phaseolus vulgaris]
gi|561012008|gb|ESW10915.1| hypothetical protein
PHAVU_009G249000g [Phaseolus vulgaris]
Length = 1303
Score = 57.8 bits (138), Expect = 3e-06
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Frame = -3
Query: 634 IDEVTRQLARRYKHWLMYYQVMLIGGTSQRNKGC-RVAPLLED-------KSQCFQXXXX 479
+D R++ARRYK L+YYQVML G T C + +P D S
Sbjct: 182 MDGAIREVARRYKECLVYYQVMLYGETPWWRSYCSKQSPPSVDVPNTSCVSSTSVHNESR 241
Query: 478 XXSHDQGEKVHPLDVEEIM-IEEIKDKAYSSFGTSKRRTPLQRDGNALLK-KLNEVYSGN 305
S + +KVHP D +++M E + K + + D AL + K E S
Sbjct: 242 LKSCNMYKKVHPFDSQDVMHAMEHESKQFMDV------AEYEGDKKALKQLKSVEYQSKE 295
Query: 304 SVENSEVKCLQDMLKESQSETPVSIYSHNDSPEGSDSEEQGDSREGSVAIMKIKADNTQP 125
+ S +KC +DM+ E+ S+TPVS+ + E D R+ + KAD+ P
Sbjct: 296 NQTISSIKCFKDMMIETHSKTPVSVDAFFKDFRARKDMENVDDRKIYIQTTITKADDLPP 355
Query: 124 K 122
+
Sbjct: 356 E 356
>ref|XP_006296841.1| hypothetical protein CARUB_v10012828mg [Capsella rubella]
gi|482565550|gb|EOA29739.1| hypothetical protein
CARUB_v10012828mg [Capsella rubella]
Length = 1266
Score = 57.0 bits (136), Expect = 5e-06
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Frame = -3
Query: 631 DEVTRQLARRYKHWLMYYQVMLIGGTSQRNKGCRVAPLLEDKSQCFQXXXXXXSHDQGEK 452
DE R++AR+YK+ YYQVM G T Q C P L + + Q +H EK
Sbjct: 182 DEEIREIARKYKYRATYYQVMSYGETHQPQSECTEKP-LRRQMKYGQEISAANAHSVAEK 240
Query: 451 ------------VHPLDVEEIMIEEIKDKAYSSFGTSKRRTPLQRDGNALLKKLNEVYSG 308
+H +D++E + +I +K +S K + L L E Y+
Sbjct: 241 LELSETCEYQSHLHSVDLQEDELNDIFNKIKASRKIEKSTNNFEDSPPYLDWNLEEDYNP 300
Query: 307 NSVENSEVKCLQDMLKESQSETPVSI 230
+++ +CL + LKESQ +T S+
Sbjct: 301 ELGKSTRARCLNEFLKESQPDTSNSV 326