BLASTX nr result
ID: Cocculus23_contig00041458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00041458
(466 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007206822.1| hypothetical protein PRUPE_ppa025990mg [Prun... 106 3e-21
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,... 105 8e-21
gb|EYU18966.1| hypothetical protein MIMGU_mgv1a004265mg [Mimulus... 104 1e-20
emb|CBI16134.3| unnamed protein product [Vitis vinifera] 104 1e-20
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
gb|EXC10650.1| hypothetical protein L484_025231 [Morus notabilis] 103 3e-20
ref|XP_006488325.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_006424825.1| hypothetical protein CICLE_v10028134mg [Citr... 103 3e-20
ref|XP_007009957.1| Tetratricopeptide repeat (TPR)-like superfam... 102 4e-20
ref|XP_006347407.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_004241523.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_002314181.2| hypothetical protein POPTR_0009s03620g [Popu... 97 2e-18
gb|EPS72087.1| hypothetical protein M569_02669, partial [Genlise... 95 9e-18
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_006307211.1| hypothetical protein CARUB_v10008810mg [Caps... 90 3e-16
ref|XP_006417788.1| hypothetical protein EUTSA_v10007326mg [Eutr... 89 5e-16
ref|XP_002892408.1| pentatricopeptide repeat-containing protein ... 89 5e-16
ref|XP_004487242.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_007150323.1| hypothetical protein PHAVU_005G143900g [Phas... 88 1e-15
>ref|XP_007206822.1| hypothetical protein PRUPE_ppa025990mg [Prunus persica]
gi|462402464|gb|EMJ08021.1| hypothetical protein
PRUPE_ppa025990mg [Prunus persica]
Length = 528
Score = 106 bits (265), Expect = 3e-21
Identities = 56/88 (63%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = -1
Query: 262 SDSSSDSENPNREQPTS-LSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXX 86
+D + RE+P S LS RIE LP G PV SAFQSWMGDG PI RGDIFH +
Sbjct: 44 NDFTGKVSESKREEPRSCLSYRIEKLPNGEPVGSAFQSWMGDGFPIHRGDIFHAINRLRK 103
Query: 85 XXXXXRALEVMEWVIRERPYRPKELDYS 2
RALEVMEWVIRERPYRPKELDYS
Sbjct: 104 LKLNKRALEVMEWVIRERPYRPKELDYS 131
>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 521
Score = 105 bits (261), Expect = 8e-21
Identities = 53/91 (58%), Positives = 58/91 (63%)
Frame = -1
Query: 274 CTLISDSSSDSENPNREQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXX 95
CT +D E P SLS RIE LPRG P+ AFQSWM +G PI RGD+FH +
Sbjct: 34 CTQTTDVKILEPEEQEENPKSLSLRIEKLPRGEPIGLAFQSWMREGFPIHRGDVFHAINR 93
Query: 94 XXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
RALEVMEWVIRERPYRPKELDYS
Sbjct: 94 LRKLKLNKRALEVMEWVIRERPYRPKELDYS 124
>gb|EYU18966.1| hypothetical protein MIMGU_mgv1a004265mg [Mimulus guttatus]
Length = 536
Score = 104 bits (260), Expect = 1e-20
Identities = 55/89 (61%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Frame = -1
Query: 262 SDSSSDSENPNRE--QPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXX 89
S++SS+SE ++E + SLS RIE L RG V SAFQSWMGDG P+ RGDIFH +
Sbjct: 50 SETSSESEKESKEGEEAKSLSWRIEKLQRGESVASAFQSWMGDGLPVHRGDIFHSINRLR 109
Query: 88 XXXXXXRALEVMEWVIRERPYRPKELDYS 2
RALEVMEWVIRERPY PKELDYS
Sbjct: 110 RLKSTKRALEVMEWVIRERPYMPKELDYS 138
>emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 104 bits (260), Expect = 1e-20
Identities = 54/86 (62%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = -1
Query: 256 SSSDSENPNREQPT-SLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXX 80
S +S PN+E+ + SLS RIE LPRG PV AFQSWMG+G PI RG IFH +
Sbjct: 44 SFEESSKPNQEEESKSLSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLK 103
Query: 79 XXXRALEVMEWVIRERPYRPKELDYS 2
RALEVMEWV+RERPYRPKELDYS
Sbjct: 104 FNKRALEVMEWVVRERPYRPKELDYS 129
>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 104 bits (260), Expect = 1e-20
Identities = 54/86 (62%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = -1
Query: 256 SSSDSENPNREQPT-SLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXX 80
S +S PN+E+ + SLS RIE LPRG PV AFQSWMG+G PI RG IFH +
Sbjct: 68 SFEESSKPNQEEESKSLSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLK 127
Query: 79 XXXRALEVMEWVIRERPYRPKELDYS 2
RALEVMEWV+RERPYRPKELDYS
Sbjct: 128 FNKRALEVMEWVVRERPYRPKELDYS 153
>gb|EXC10650.1| hypothetical protein L484_025231 [Morus notabilis]
Length = 524
Score = 103 bits (256), Expect = 3e-20
Identities = 52/94 (55%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Frame = -1
Query: 274 CTLISDSSSDSENPNREQPTS---LSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHC 104
CT ++ + E ++ + T+ LS RIE LP+G VLSAFQ+WMGDG P+ RGDIFH
Sbjct: 34 CTQAPNNLPNEEPESKREETTRPCLSYRIEKLPKGEAVLSAFQNWMGDGFPVHRGDIFHA 93
Query: 103 VXXXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
+ RALEVMEWVIRERPYRP+ELDYS
Sbjct: 94 INRLRKLKMNKRALEVMEWVIRERPYRPRELDYS 127
>ref|XP_006488325.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Citrus sinensis]
Length = 521
Score = 103 bits (256), Expect = 3e-20
Identities = 51/78 (65%), Positives = 56/78 (71%)
Frame = -1
Query: 235 PNREQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEV 56
P E+P LS RIE LPRG PV SAFQSWM +G P+ RG+IFH + RALEV
Sbjct: 46 PGLEKPKCLSLRIERLPRGEPVGSAFQSWMREGFPVHRGEIFHSINRLRKLQLNKRALEV 105
Query: 55 MEWVIRERPYRPKELDYS 2
MEWVIRERPYRPKELDYS
Sbjct: 106 MEWVIRERPYRPKELDYS 123
>ref|XP_006424825.1| hypothetical protein CICLE_v10028134mg [Citrus clementina]
gi|557526759|gb|ESR38065.1| hypothetical protein
CICLE_v10028134mg [Citrus clementina]
Length = 546
Score = 103 bits (256), Expect = 3e-20
Identities = 51/78 (65%), Positives = 56/78 (71%)
Frame = -1
Query: 235 PNREQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEV 56
P E+P LS RIE LPRG PV SAFQSWM +G P+ RG+IFH + RALEV
Sbjct: 71 PGLEKPKCLSLRIERLPRGEPVGSAFQSWMREGFPVHRGEIFHSINRLRKLQLNKRALEV 130
Query: 55 MEWVIRERPYRPKELDYS 2
MEWVIRERPYRPKELDYS
Sbjct: 131 MEWVIRERPYRPKELDYS 148
>ref|XP_007009957.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508726870|gb|EOY18767.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 519
Score = 102 bits (255), Expect = 4e-20
Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = -1
Query: 274 CTLISDS-SSDSENPNREQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVX 98
C+ +D+ + P ++P LS RIE LP+G V SAF+SWM DG P+ RGDIFH +
Sbjct: 31 CSRTADNLQGQTSEPKTDEPKCLSLRIERLPKGETVGSAFKSWMADGFPVHRGDIFHAIN 90
Query: 97 XXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
RALEVMEWVIRERPYRPKELDYS
Sbjct: 91 RLRKLKLNKRALEVMEWVIRERPYRPKELDYS 122
>ref|XP_006347407.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 535
Score = 100 bits (250), Expect = 2e-19
Identities = 55/103 (53%), Positives = 63/103 (61%), Gaps = 12/103 (11%)
Frame = -1
Query: 274 CTLISDSSSDSENPNREQP------------TSLSSRIETLPRGNPVLSAFQSWMGDGNP 131
C+ ISD++ SEN E+ +LS RIE +P G + S FQSWMGDG P
Sbjct: 36 CSKISDANFTSENSESEKEERLVDQGMVATRNNLSQRIERVPIGESIGSTFQSWMGDGLP 95
Query: 130 IQRGDIFHCVXXXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
I RGDIFH + RALEVMEWVIRERPYRPKELDYS
Sbjct: 96 IHRGDIFHTMNRLRKLKLNKRALEVMEWVIRERPYRPKELDYS 138
>ref|XP_004241523.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Solanum lycopersicum]
Length = 535
Score = 97.8 bits (242), Expect = 1e-18
Identities = 54/103 (52%), Positives = 61/103 (59%), Gaps = 12/103 (11%)
Frame = -1
Query: 274 CTLISDSSSDSENPNREQP------------TSLSSRIETLPRGNPVLSAFQSWMGDGNP 131
C SD++ SE E+ SLS RIE++P G + S FQSWMGDG P
Sbjct: 36 CLKTSDANFTSEKSESEKEERLVDQGMVTTRNSLSQRIESVPIGESIGSTFQSWMGDGLP 95
Query: 130 IQRGDIFHCVXXXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
I RGDIFH + RALEVMEWVIRERPYRPKELDYS
Sbjct: 96 IHRGDIFHTMNRLRKLKLNKRALEVMEWVIRERPYRPKELDYS 138
>ref|XP_002314181.2| hypothetical protein POPTR_0009s03620g [Populus trichocarpa]
gi|550330961|gb|EEE88136.2| hypothetical protein
POPTR_0009s03620g [Populus trichocarpa]
Length = 525
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/75 (65%), Positives = 53/75 (70%)
Frame = -1
Query: 226 EQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEVMEW 47
E P LSSRIE LPRG V AFQSWMG+G PI RGD+FH + RALEVMEW
Sbjct: 54 EGPKCLSSRIEKLPRGESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEW 113
Query: 46 VIRERPYRPKELDYS 2
V+RERPYR KELDYS
Sbjct: 114 VVRERPYRLKELDYS 128
>gb|EPS72087.1| hypothetical protein M569_02669, partial [Genlisea aurea]
Length = 467
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/70 (65%), Positives = 51/70 (72%)
Frame = -1
Query: 211 LSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEVMEWVIRER 32
LS RIE +PRG V SAF+SWMGDG P+QRGDIFH V RALEVMEWV+RER
Sbjct: 7 LSRRIEQVPRGESVASAFRSWMGDGFPVQRGDIFHTVNRLRRLKSTRRALEVMEWVLRER 66
Query: 31 PYRPKELDYS 2
PY+P E DYS
Sbjct: 67 PYKPSEQDYS 76
>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/75 (61%), Positives = 52/75 (69%)
Frame = -1
Query: 226 EQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEVMEW 47
E+P LS RIE +P+G V AF+SWMGDG PI RGDIFH + RALEVMEW
Sbjct: 55 EEPKCLSLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEW 114
Query: 46 VIRERPYRPKELDYS 2
VIRE+PYR ELDYS
Sbjct: 115 VIREKPYRINELDYS 129
>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 91.7 bits (226), Expect = 1e-16
Identities = 45/71 (63%), Positives = 51/71 (71%)
Frame = -1
Query: 214 SLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEVMEWVIRE 35
SLS RIE LP+G V SAF+SWM DG P+ GDIFH + RAL+VMEWVIRE
Sbjct: 40 SLSRRIEKLPKGESVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVIRE 99
Query: 34 RPYRPKELDYS 2
RPYRP+ELDYS
Sbjct: 100 RPYRPRELDYS 110
>ref|XP_006307211.1| hypothetical protein CARUB_v10008810mg [Capsella rubella]
gi|482575922|gb|EOA40109.1| hypothetical protein
CARUB_v10008810mg [Capsella rubella]
Length = 534
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = -1
Query: 271 TLISDSSSDSE-----NPNREQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFH 107
TLIS S E + E+ LS RIE LP+G V SA QSWMGDG P+ GD++H
Sbjct: 43 TLISSPKSPEERCIGSDGEEERDKCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYH 102
Query: 106 CVXXXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
+ RALE+MEWVIRERPYRP EL+YS
Sbjct: 103 AINRLRKLGRNKRALELMEWVIRERPYRPGELEYS 137
>ref|XP_006417788.1| hypothetical protein EUTSA_v10007326mg [Eutrema salsugineum]
gi|557095559|gb|ESQ36141.1| hypothetical protein
EUTSA_v10007326mg [Eutrema salsugineum]
Length = 534
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = -1
Query: 271 TLISDSSSDSENPN-----REQPTSLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFH 107
TLIS + S E + E LS RIE LP+G V SA QSWMGDG P+ GD++H
Sbjct: 43 TLISSTKSPDETCSGSEGEEETNKCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYH 102
Query: 106 CVXXXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
+ RALE+MEWVIRERPYRP EL+YS
Sbjct: 103 AINRLRKLGRNKRALELMEWVIRERPYRPGELEYS 137
>ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338250|gb|EFH68667.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Frame = -1
Query: 271 TLISDSSSDSENP------NREQPTS-LSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDI 113
TLIS S E E+P LS RIE LP+G V SA QSWMGDG P+ GD+
Sbjct: 43 TLISSKKSPEETSCLGSDVEEEEPNKCLSVRIEKLPKGVTVGSALQSWMGDGFPVHGGDV 102
Query: 112 FHCVXXXXXXXXXXRALEVMEWVIRERPYRPKELDYS 2
+H + RALE+MEW+IRERPYRP EL+YS
Sbjct: 103 YHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYS 139
>ref|XP_004487242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cicer arietinum]
Length = 512
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = -1
Query: 214 SLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEVMEWVIRE 35
SL RIE LP+G + SAF+SWM DG P++ DIFH + RALEVMEWVIRE
Sbjct: 45 SLCKRIEKLPKGESIGSAFRSWMRDGFPVRGADIFHTINRLRKLNFNKRALEVMEWVIRE 104
Query: 34 RPYRPKELDYS 2
RPYRP+ELDYS
Sbjct: 105 RPYRPRELDYS 115
>ref|XP_007150323.1| hypothetical protein PHAVU_005G143900g [Phaseolus vulgaris]
gi|561023587|gb|ESW22317.1| hypothetical protein
PHAVU_005G143900g [Phaseolus vulgaris]
Length = 512
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/71 (59%), Positives = 49/71 (69%)
Frame = -1
Query: 214 SLSSRIETLPRGNPVLSAFQSWMGDGNPIQRGDIFHCVXXXXXXXXXXRALEVMEWVIRE 35
SLS RIE LP+G V S F+ WM DG P+ GD+FH + RAL+VMEWVIRE
Sbjct: 45 SLSRRIERLPKGESVGSVFRGWMRDGYPVHGGDVFHSINRLRRLNMNKRALQVMEWVIRE 104
Query: 34 RPYRPKELDYS 2
RPYRP+ELDYS
Sbjct: 105 RPYRPRELDYS 115