BLASTX nr result
ID: Cocculus23_contig00041305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00041305
(554 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244841.1| PREDICTED: uncharacterized protein LOC101257... 90 4e-16
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] 56 6e-14
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 52 1e-13
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 50 3e-11
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t... 56 4e-11
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 60 1e-10
gb|AFB73911.1| polyprotein [Citrus sinensis] 59 1e-10
gb|AFB73912.1| polyprotein [Citrus sinensis] 59 1e-10
gb|AAT40486.1| putative polyprotein [Solanum demissum] 52 2e-10
emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group] 48 5e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 58 3e-09
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 58 3e-09
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera] 44 4e-09
emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera] 43 5e-09
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 56 5e-09
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi... 51 6e-09
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 57 6e-09
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 55 6e-09
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera] 51 6e-09
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] 52 1e-08
>ref|XP_004244841.1| PREDICTED: uncharacterized protein LOC101257390 [Solanum
lycopersicum]
Length = 469
Score = 89.7 bits (221), Expect = 4e-16
Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Frame = +3
Query: 6 FDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAP-------HDKGSIFVPL------ 146
+DS+ K W+ MD T KF +SRDVVFDEVS+ +SA D + P
Sbjct: 275 YDSYMKDWRCMDQKTNKFTISRDVVFDEVSSLFSAQKVVVLGDDQDNLKLLFPEVNRPAP 334
Query: 147 EGVDLEQFPTAHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVI 326
D+E + S+E + Q RRSTR+++QP YL DY+V + SV
Sbjct: 335 SNEDIESVSLSQNISREGDGEHQAT---------RRSTREKRQPDYLKDYKVKLKNYSVT 385
Query: 327 FCFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
C G +EP+SY + WE AM+EE AL K
Sbjct: 386 SCLFTGASTIEEPLSYEEENGCQDWERAMQEENDALDK 423
>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
Length = 1194
Score = 55.8 bits (133), Expect(2) = 6e-14
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPTAH 182
G+DS K W+ +P T K+ SR+VVFDE S+++S+ +P V ++ +A
Sbjct: 669 GYDSQXKRWRCCNPTTGKYYTSRNVVFDESSSWWSSEKE-----ILPDSDVFKDELQSAR 723
Query: 183 -------------------ESSKEWQHDMQGDTNQ-------SCDVLLRRSTR-QRQQPG 281
E+ WQ + G ++ + LRRS R ++ P
Sbjct: 724 IQLSLGEAENAADGDIGDDETQSPWQTGVHGQPSEEGEPSEIEAPIPLRRSARTKKPNPK 783
Query: 282 YLNDYQVGMNYCSVIFCFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
Y N ++ D EP ++ +A + P W +AMKEEI AL +
Sbjct: 784 YAN-------------VAIVEDANTKEPETFAEAFQNPDWSKAMKEEIAALKR 823
Score = 47.0 bits (110), Expect(2) = 6e-14
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T ELVPK D E I+CKWVYK+K++ G+I+ +KA
Sbjct: 826 TWELVPKPRDVEPISCKWVYKIKRRTXGSIEMHKA 860
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 51.6 bits (122), Expect(2) = 1e-13
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPH---DKGSIFVPLEGVDLEQFP 173
G+DS RK W+ DP T K SR+VVFDE S+++S+ D L+ ++
Sbjct: 672 GYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSBVFKDELQSARIQL-- 729
Query: 174 TAHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVIFCFLMGDIC 353
+ E+ D+ D QS T QP + Y +V ++ D
Sbjct: 730 SLGEAENAXDGDIGDDXTQS-----PWQTGVHGQPSEERTKKPNPKYANVA---IVEDAN 781
Query: 354 EDEPISYHDAKRLPKWEEAMKEEIMALTK 440
EP ++ +A + W +AM EEI AL +
Sbjct: 782 AKEPXTFAEAFQNSDWSKAMXEEIAALKR 810
Score = 50.1 bits (118), Expect(2) = 1e-13
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T ELVPK D E +CKWVYK+K++ DG+I+R+KA
Sbjct: 813 TWELVPKPRDVEPXSCKWVYKIKRRTDGSIERHKA 847
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 50.4 bits (119), Expect(2) = 3e-11
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVP--LEGVDLEQFPT 176
G+ +KG++ DP++ VSR+VVF E + + H + S+ LE E
Sbjct: 1853 GYGETQKGYRCYDPVSHXLRVSRNVVFWEHRLFVELS-HFRSSLTNSSVLEIFPXESLVA 1911
Query: 177 AHESSKEWQHDMQG------DTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVIFCFL 338
+ E H G + D+ R STR R P +L DY +C L
Sbjct: 1912 DEQIDDELPHFETGFPAPTLPEDPPQDIPPRHSTRVRSIPPHLLDY-----HCYTALATL 1966
Query: 339 MGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
EP +Y +A P W+ AMKEE+ ALTK
Sbjct: 1967 ------HEPQTYREASTDPLWQIAMKEELDALTK 1994
Score = 43.1 bits (100), Expect(2) = 3e-11
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 439 KYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
K T +LVP ++ CKW+YK+K + DG+++RYKA
Sbjct: 1994 KNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKA 2031
>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1250
Score = 56.2 bits (134), Expect(2) = 4e-11
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTY-----YSAAPHDKGSIFVPLE-----G 152
G + K + +D T K VVSRDVVFDE ++ S + D G+ + E G
Sbjct: 566 GTEPGSKAYCLLDLTTHKIVVSRDVVFDETKSWKWNDLRSESTEDSGNFVLGFEQFGNNG 625
Query: 153 VDLEQFPTAHESSKEWQHD-----------------MQGDTNQSCDVLLRRSTRQRQQPG 281
+ E+ E+S++ D +G ++ LRRS RQ P
Sbjct: 626 LRREREEHGSETSEKNTEDEDTSRVTEATETEEPIQEEGQPQENTQPTLRRSQRQVSMPK 685
Query: 282 YLNDYQVGMNYCSVIFCFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
YL DY + S + +EP Y +AK +W EA ++EI ++ K
Sbjct: 686 YLEDYVLLAEEESEYLL----SVINEEPWDYAEAKETQEWREACEDEIASIEK 734
Score = 37.0 bits (84), Expect(2) = 4e-11
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 436 QKYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
+K T +LV A+ I KWV+KLKK +G I++YKA
Sbjct: 733 EKNKTWDLVELPQGAKPIGLKWVFKLKKNAEGNINKYKA 771
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 60.5 bits (145), Expect(2) = 1e-10
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPTAH 182
G K W+ DP+ KK V+S+DVVFDE ++ D V + V LE
Sbjct: 692 GVSEESKAWRLYDPVMKKIVISKDVVFDEDKSW------DWDQADVEAKEVTLECGDEDD 745
Query: 183 ESSKE--------WQHDMQGDTNQSCDVLLRRS-----------TRQRQQPGYLNDYQVG 305
E + E + + D N S +L S TR+R+ PG++ DY+ G
Sbjct: 746 EKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETG 805
Query: 306 -----MNYCSVIFCFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
SV+ +M E +PI + DA + W EAM+ EI ++ K
Sbjct: 806 EGEEIEENLSVMLLMMM---TEADPIQFDDAVKDKIWREAMEHEIESIVK 852
Score = 31.6 bits (70), Expect(2) = 1e-10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 487 ITCKWVYKLKKKIDGTIDRYKA 552
I KWVYK K DG +D+YKA
Sbjct: 868 IGVKWVYKTKLNEDGEVDKYKA 889
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVD--LEQFPT 176
G+ KG++ DP K V+SRDV+F V D G++ E V +E P
Sbjct: 678 GYADGVKGYRLWDPTAHKIVISRDVIF--VEDQLQRKDGDDGTVKEKSETVPVYVENNPE 735
Query: 177 AHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVIFCFLMGDICE 356
+SS+ + + +S +RRSTR+R+ P + ++Y +N V +C L D
Sbjct: 736 NSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTEIN---VAYCLLTED--- 789
Query: 357 DEPISYHDA---KRLPKWEEAMKEEIMALTK 440
EP ++H+A + W AM+EEI AL K
Sbjct: 790 GEPSTFHEALNSSDVALWMTAMQEEIEALHK 820
Score = 33.1 bits (74), Expect(2) = 1e-10
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 439 KYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
K T ELVP + I KWVYK+K+ + ++RY+A
Sbjct: 820 KNKTWELVPLPRGRKAIGNKWVYKIKRDGNDQVERYRA 857
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVD--LEQFPT 176
G+ KG++ DP K V+SRDV+F V D G++ E V +E P
Sbjct: 678 GYADGVKGYRLWDPTAHKIVISRDVIF--VEDQLQRKDGDDGTVKEKSETVPVYVENNPE 735
Query: 177 AHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVIFCFLMGDICE 356
+SS+ + + +S +RRSTR+R+ P + ++Y +N V +C L D
Sbjct: 736 NSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTEIN---VAYCLLTED--- 789
Query: 357 DEPISYHDAKR---LPKWEEAMKEEIMALTK 440
EP ++H+A + W AM+EEI AL K
Sbjct: 790 GEPSTFHEALNSLDVALWMTAMQEEIEALHK 820
Score = 32.7 bits (73), Expect(2) = 1e-10
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 439 KYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
K T ELVP + I KWVYK+K+ + ++RY+A
Sbjct: 820 KNKTWELVPLPHGRKAIGNKWVYKIKRDGNDQVERYRA 857
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 9/155 (5%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPTAH 182
G+ +KGW+ D T VSRDV FDE Y+++ + +D H
Sbjct: 593 GYPFGKKGWRVYDLETGDLYVSRDVTFDEKIFPYASSV----TTCETTTSLDTPTMQHDH 648
Query: 183 ESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVIFCFLMGDICED- 359
+ + + + + N D R R R+ L DY C V C C
Sbjct: 649 SAYIDSRGSVDIEPNIDEDNSTRILLRPRKVSSRLKDYVCSTTQCHVTSCTNTPTQCSSP 708
Query: 360 --------EPISYHDAKRLPKWEEAMKEEIMALTK 440
EPI + D P W AMKEEI AL K
Sbjct: 709 TKSQSSGTEPIRFSDVVHDPLWRHAMKEEIDALEK 743
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 448 T*ELVP--KTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T E +P KTT I CKWVYK+K DGTI+RYKA
Sbjct: 748 TLEFLPPGKTT----IGCKWVYKIKYNSDGTIERYKA 780
>emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]
Length = 624
Score = 47.8 bits (112), Expect(2) = 5e-10
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPTAH 182
G+ S +KG++ P ++ VS DV F E +Y D S+FV L+ +++
Sbjct: 245 GYSSGQKGYKCWSPSERRTFVSMDVTFRESVPFYGERT-DLSSLFVDLDNPIIDEDGQEG 303
Query: 183 ESSKEWQHDMQGDTNQSCDVLLRRSTRQR-----QQPGY----LND-------YQVGMNY 314
E+ + G + + +R+ R Q+ G+ +ND Y +
Sbjct: 304 ENGSSGEEFETGGEETNLPIAIRKGVRSNAGKPPQRYGFEAQSVNDDKNNIANYVSYASL 363
Query: 315 CSVIFCFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
S F+ + P + +AK+ P+W +AM EE+ AL K
Sbjct: 364 SSTYKAFVTSLNSVEIPNDWREAKQDPRWHQAMLEELEALEK 405
Score = 42.0 bits (97), Expect(2) = 5e-10
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 436 QKYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
+K T +LVP +++ CKWVY +K+ DG ++RYKA
Sbjct: 404 EKNKTWDLVPFPKGKKVVNCKWVYTVKQNPDGNVERYKA 442
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 57.8 bits (138), Expect(2) = 3e-09
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVF--DEVSTYYSAAPHDKGSIFVPLEGVDLEQFPT 176
G+ + KG++ DP +K VVSRDVVF +E+ + K + V +E E +
Sbjct: 678 GYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKESDSS 737
Query: 177 AHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMN--YCSVIFCFLMGDI 350
ES E Q D N +RRSTRQ Q+P + +DY + + YC +
Sbjct: 738 EAESVHEEQE--PDDVNDG----VRRSTRQTQKPSWQSDYVMTSHDAYCLITE------- 784
Query: 351 CEDEPISYHDA---KRLPKWEEAMKEEIMAL 434
E EP ++H+A +W AM EE+ AL
Sbjct: 785 -EGEPSTFHEALNGSDASQWMTAMHEEMEAL 814
Score = 29.3 bits (64), Expect(2) = 3e-09
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T ELV + I KWVYK+K+ + ++RY+A
Sbjct: 819 TWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRA 853
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 57.8 bits (138), Expect(2) = 3e-09
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVF--DEVSTYYSAAPHDKGSIFVPLEGVDLEQFPT 176
G+ + KG++ DP +K VVSRDVVF +E+ + K + V +E E +
Sbjct: 678 GYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKESDSS 737
Query: 177 AHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMN--YCSVIFCFLMGDI 350
ES E Q D N +RRSTRQ Q+P + +DY + + YC +
Sbjct: 738 EAESVHEEQE--PDDVNDG----VRRSTRQTQKPSWQSDYVMTSHDAYCLITE------- 784
Query: 351 CEDEPISYHDA---KRLPKWEEAMKEEIMAL 434
E EP ++H+A +W AM EE+ AL
Sbjct: 785 -EGEPSTFHEALNGSDASQWMTAMHEEMEAL 814
Score = 29.3 bits (64), Expect(2) = 3e-09
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T ELV + I KWVYK+K+ + ++RY+A
Sbjct: 819 TWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRA 853
>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
Length = 2471
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPL-----------E 149
G+ +KG++ DP++ + VS+ +F S S D F P E
Sbjct: 1009 GYGETQKGYRCYDPVSHRLRVSQ--IFPNESLVPSTNTFDPPLDFSPDIFDVSPRQVADE 1066
Query: 150 GVDLEQFPTAHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMNYCSVIF 329
+D ++ P H ++ + D Q D+ R STR R P +L DY +C
Sbjct: 1067 QID-DELP--HFETRSPAPTLPEDPPQ--DIPPRHSTRVRSIPPHLLDY-----HCYTAL 1116
Query: 330 CFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
L EP +Y +A P W+ AMKEE+ ALTK
Sbjct: 1117 ATL------HEPQTYREASTDPLWQIAMKEELDALTK 1147
Score = 43.1 bits (100), Expect(2) = 4e-09
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 439 KYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
K T +LVP ++ CKW+YK+K + DG+++RYKA
Sbjct: 1147 KNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKA 1184
>emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera]
Length = 1168
Score = 43.1 bits (100), Expect(2) = 5e-09
Identities = 28/68 (41%), Positives = 35/68 (51%)
Frame = +3
Query: 237 DVLLRRSTRQRQQPGYLNDYQVGMNYCSVIFCFLMGDICEDEPISYHDAKRLPKWEEAMK 416
D+L R STR R P +L DY +C L EP +Y +A P W+ AMK
Sbjct: 631 DILPRHSTRVRSIPPHLLDY-----HCYTALATL------HEPQTYREASTDPLWQIAMK 679
Query: 417 EEIMALTK 440
EE+ ALTK
Sbjct: 680 EELDALTK 687
Score = 43.1 bits (100), Expect(2) = 5e-09
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 439 KYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
K T +LVP ++ CKW+YK+K + DG+++RYKA
Sbjct: 687 KNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKA 724
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 56.2 bits (134), Expect(2) = 5e-09
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPT-- 176
G K ++ DPI++K ++SRDVVF+E + H+ +I LE E+ T
Sbjct: 444 GVSEESKAYRLFDPISQKIIISRDVVFEEDQQWKWDNSHEP-AILADLEWESDEETDTED 502
Query: 177 -AHESSKEWQHDMQGDTNQSCDVLLRRST----------RQRQQPGYLNDYQVGMNYC-- 317
+E E DM + D T R R+ P ++ DY+ G
Sbjct: 503 DGNEEEPEAGEDMGNSESNDSDSFENGETTYEDSTPHEGRTRRPPTWMQDYETGAGLSDE 562
Query: 318 SVIFCFLMGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
+ + + +P +Y DA R KW AM +EI A+ +
Sbjct: 563 ESVNLAQLALFTDSDPTTYDDAVRSEKWRLAMNQEIEAIER 603
Score = 30.0 bits (66), Expect(2) = 5e-09
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T EL + + I KW++K K +G +D+YKA
Sbjct: 606 TWELTDLPSGGKTIGVKWIFKTKLNENGEVDKYKA 640
>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1307
Score = 50.8 bits (120), Expect(2) = 6e-09
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVV--SRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPT 176
G + K ++ +DP +K + + D ++S +S + G+ + E D+E
Sbjct: 650 GTEPGSKAYRLLDPTNRKIIKWNNSDSETRDISGTFSLTLGEFGNNGIQ-ESDDIETEKN 708
Query: 177 AHESSKEWQHDMQGDTNQSCDV--------------LLRRSTRQRQQPGYLNDYQVGMNY 314
ES + + + + N+ + LRRSTRQ +P YL+DY
Sbjct: 709 GEESENSHEEEGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPNYLDDY------ 762
Query: 315 CSVIFCFLMGD----ICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
V+ + G+ DEP + +A +L +W +A KEEI+++ K
Sbjct: 763 --VLMAEIEGEQVLLAINDEPWDFKEANKLKEWRDACKEEILSIEK 806
Score = 35.0 bits (79), Expect(2) = 6e-09
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 436 QKYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
+K T L+ ++I KWV+K+K+ DG+I++YKA
Sbjct: 805 EKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKA 843
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 56.6 bits (135), Expect(2) = 6e-09
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVF--DEVSTYYSAAPHDKGSIFVPLEGVDLEQFPT 176
G+ + KG++ DP +K VVSRDVVF +E+ + K + V +E E+
Sbjct: 678 GYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDSTSKETAIVQME----EKSKE 733
Query: 177 AHESSKEWQHDMQ--GDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMN--YCSVIFCFLMG 344
+ S E H+ Q D N +RRSTRQ Q+P + +DY + + YC +
Sbjct: 734 SDSSEAEPVHEEQEPDDVNNG----VRRSTRQTQKPSWQSDYVMTSHDAYCLITE----- 784
Query: 345 DICEDEPISYHDA---KRLPKWEEAMKEEIMAL 434
E EP ++H+A +W AM EE+ AL
Sbjct: 785 ---EGEPSTFHEALNGSDASQWMTAMHEEMEAL 814
Score = 29.3 bits (64), Expect(2) = 6e-09
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T ELV + I KWVYK+K+ + ++RY+A
Sbjct: 819 TWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRA 853
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 55.5 bits (132), Expect(2) = 6e-09
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Frame = +3
Query: 3 GFDSHRKGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIFVPLEGVDLEQFPTAH 182
G+ + KG++ DP +K VVSRDVVF E + S +D S F + +E+
Sbjct: 678 GYADNVKGYRLWDPTARKVVVSRDVVFAE-NELQSEQKND--STFKETAILQIEEKSKES 734
Query: 183 ESSK-EWQHDMQ--GDTNQSCDVLLRRSTRQRQQPGYLNDYQVGMN--YCSVIFCFLMGD 347
+SS+ E H+ Q D N +RRSTRQ Q+P + +DY + + YC +
Sbjct: 735 DSSEAESVHEEQEPDDVNNG----VRRSTRQTQKPSWQSDYVMTGHDAYCLIAE------ 784
Query: 348 ICEDEPISYHDA---KRLPKWEEAMKEEIMALTK 440
E EP ++H+A +W A+ EE+ AL K
Sbjct: 785 --EGEPSTFHEALNGSDASQWMTAIHEEMEALRK 816
Score = 30.4 bits (67), Expect(2) = 6e-09
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 436 QKYAT*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
+K T ELV + I KWVYK+K+ + ++RY+A
Sbjct: 815 RKNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRA 853
>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
Length = 1161
Score = 51.2 bits (121), Expect(2) = 6e-09
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 448 T*ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
T ELVPK D E I+CKWVYK+K++ DG I+R+KA
Sbjct: 758 TWELVPKXRDVEPISCKWVYKIKRRTDGLIERHKA 792
Score = 34.7 bits (78), Expect(2) = 6e-09
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Frame = +3
Query: 183 ESSKEWQHDMQGDTNQSCD-------VLLRRSTRQRQ-QPGYLNDYQVGMNYCSVIFCFL 338
E+ WQ + G ++ + + LRRS R ++ P Y N +
Sbjct: 675 ETQSPWQTGVHGQXSEEGEPSETEAPIPLRRSARTKKPNPKYAN-------------VAI 721
Query: 339 MGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
+ D EP ++ +A + P W +AMKEEI AL +
Sbjct: 722 VEDANAKEPETFAEAFQNPDWSKAMKEEIAALKR 755
>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
Length = 1278
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Frame = +3
Query: 21 KGWQHMDPITKKFVVSRDVVFDEVSTYYSAAPHDKGSIF----------VPLEGVDLEQF 170
K ++ +P+TKK V SRDV+F E ST+ IF + + +
Sbjct: 631 KAYKLFNPLTKKIVTSRDVIFXEESTWNWNGQXPTQVIFDNDAEEERQQLLQQRIPTVSI 690
Query: 171 PTAHESSKEWQHDMQGDTNQSCDVLLRRSTRQRQQPGYLNDYQV----GMNYCSVIFCFL 338
P + + + +S V R R R++P ++ D++V NY ++ L
Sbjct: 691 PKSPPNDASTATETSSTPAESNVVAESRLRRVRKRPAWMQDFEVTGVQSDNYDTIAHYAL 750
Query: 339 MGDICEDEPISYHDAKRLPKWEEAMKEEIMALTK 440
+ D +PI++ +A + KW +AM EEI ++ K
Sbjct: 751 LSDC---DPITFQEAIKDLKWHKAMNEEIGSIEK 781
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 454 ELVPKTTDAELITCKWVYKLKKKIDGTIDRYKA 552
ELV + I KWVYK K DG +D+YKA
Sbjct: 786 ELVELPKGQKSIGVKWVYKTKLNKDGGVDKYKA 818