BLASTX nr result
ID: Cocculus23_contig00041199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00041199
(735 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp... 86 1e-14
emb|CBI27903.3| unnamed protein product [Vitis vinifera] 82 2e-13
ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun... 72 3e-10
ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putat... 71 4e-10
ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putat... 71 4e-10
ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putat... 71 4e-10
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm... 70 8e-10
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp... 62 2e-07
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp... 62 2e-07
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr... 62 2e-07
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat... 58 3e-06
>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 85.9 bits (211), Expect = 1e-14
Identities = 51/155 (32%), Positives = 74/155 (47%)
Frame = +1
Query: 199 SNTFRALRLETHCSYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVKFGSQ 378
SNTFR L+ CSY I+V++++ + RPSF+EQ+RD+WS+K S
Sbjct: 23 SNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKP---RPSFFEQIRDKWSLKINSP 79
Query: 379 RVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIEDPISFSLGNRIVSAPWIPKS 558
R KFPW +DSS + P+S + +R VS P I +S
Sbjct: 80 REKFPWQEQAEETQNSSGVVVPDSEVIDSS--------VGSPVSSASESRFVSVPCIHES 131
Query: 559 EISAPHFSSQTEITQNSCSKVDDEEHFDSHEKRVE 663
+ P S+ EI+QNSC + + F SH V+
Sbjct: 132 KPRNPRLVSEPEISQNSCEQGVNVVGFGSHRASVD 166
>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 82.0 bits (201), Expect = 2e-13
Identities = 47/140 (33%), Positives = 68/140 (48%)
Frame = +1
Query: 199 SNTFRALRLETHCSYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVKFGSQ 378
SNTFR L+ CSY I+V++++ + RPSF+EQ+RD+WS+K S
Sbjct: 65 SNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKP---RPSFFEQIRDKWSLKINSP 121
Query: 379 RVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIEDPISFSLGNRIVSAPWIPKS 558
R KFPW +DSS + P+S + +R VS P I +S
Sbjct: 122 REKFPWQEQAEETQNSSGVVVPDSEVIDSS--------VGSPVSSASESRFVSVPCIHES 173
Query: 559 EISAPHFSSQTEITQNSCSK 618
+ P S+ EI+QNSC +
Sbjct: 174 KPRNPRLVSEPEISQNSCEQ 193
>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
gi|462399326|gb|EMJ04994.1| hypothetical protein
PRUPE_ppa001111mg [Prunus persica]
Length = 906
Score = 71.6 bits (174), Expect = 3e-10
Identities = 46/171 (26%), Positives = 75/171 (43%)
Frame = +1
Query: 187 RNQSSNTFRALRLETHCSYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVK 366
+ S + RALR C +++ + ++ Q +PSF+EQ++D+WS+K
Sbjct: 34 QTHSFKSCRALRFRVSCKTVQVDTQ-EQPQRIKVAFEATRKKRKPKPSFFEQIQDKWSMK 92
Query: 367 FGSQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIEDPISFSLGNRIVSAPW 546
S R KFPW + EE + + +SFSL NRIV APW
Sbjct: 93 VNSPRDKFPWQKQNELVQEEKE---------EVEEEDEEEEPVNQKVSFSLPNRIVYAPW 143
Query: 547 IPKSEISAPHFSSQTEITQNSCSKVDDEEHFDSHEKRVEIKRAARNVAEFK 699
S+ P S+ E +Q+S ++ + + F H + A +N F+
Sbjct: 144 AHGSKRITPQVDSEPETSQHSGAQGKNLDGFAGHSEIDTTSGAVKNEKSFE 194
>ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putative isoform 5
[Theobroma cacao] gi|590575903|ref|XP_007012817.1| CRS1
/ YhbY domain-containing protein, putative isoform 5
[Theobroma cacao] gi|508783179|gb|EOY30435.1| CRS1 /
YhbY domain-containing protein, putative isoform 5
[Theobroma cacao] gi|508783180|gb|EOY30436.1| CRS1 /
YhbY domain-containing protein, putative isoform 5
[Theobroma cacao]
Length = 822
Score = 70.9 bits (172), Expect = 4e-10
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Frame = +1
Query: 199 SNTFRALRLETHC-SYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVK-FG 372
+N+FRAL+ + C S+Q I+V + T+ +PSF +Q++D+WS+K
Sbjct: 33 NNSFRALKFKPSCCSHQTIKVGVEITRKRKP-----------KPSFLDQIKDKWSLKPII 81
Query: 373 SQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSE-ESGGQALIEDPISFSLGNRIVSAPWI 549
S R KFPW S A+ SE + Q DP+S S +R++SAPW
Sbjct: 82 STREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSDPVSSSFPSRVISAPWS 141
Query: 550 PKSEISAPHFSSQTEITQNSCSKVDD 627
SE + PHF EI+ N SK++D
Sbjct: 142 HGSEFNEPHFDFVPEIS-NFESKIED 166
>ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putative isoform 4
[Theobroma cacao] gi|508783178|gb|EOY30434.1| CRS1 /
YhbY domain-containing protein, putative isoform 4
[Theobroma cacao]
Length = 818
Score = 70.9 bits (172), Expect = 4e-10
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Frame = +1
Query: 199 SNTFRALRLETHC-SYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVK-FG 372
+N+FRAL+ + C S+Q I+V + T+ +PSF +Q++D+WS+K
Sbjct: 33 NNSFRALKFKPSCCSHQTIKVGVEITRKRKP-----------KPSFLDQIKDKWSLKPII 81
Query: 373 SQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSE-ESGGQALIEDPISFSLGNRIVSAPWI 549
S R KFPW S A+ SE + Q DP+S S +R++SAPW
Sbjct: 82 STREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSDPVSSSFPSRVISAPWS 141
Query: 550 PKSEISAPHFSSQTEITQNSCSKVDD 627
SE + PHF EI+ N SK++D
Sbjct: 142 HGSEFNEPHFDFVPEIS-NFESKIED 166
>ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putative isoform 1
[Theobroma cacao] gi|590575888|ref|XP_007012813.1| CRS1
/ YhbY domain-containing protein, putative isoform 1
[Theobroma cacao] gi|590575892|ref|XP_007012814.1| CRS1
/ YhbY domain-containing protein, putative isoform 1
[Theobroma cacao] gi|508783175|gb|EOY30431.1| CRS1 /
YhbY domain-containing protein, putative isoform 1
[Theobroma cacao] gi|508783176|gb|EOY30432.1| CRS1 /
YhbY domain-containing protein, putative isoform 1
[Theobroma cacao] gi|508783177|gb|EOY30433.1| CRS1 /
YhbY domain-containing protein, putative isoform 1
[Theobroma cacao]
Length = 873
Score = 70.9 bits (172), Expect = 4e-10
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Frame = +1
Query: 199 SNTFRALRLETHC-SYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVK-FG 372
+N+FRAL+ + C S+Q I+V + T+ +PSF +Q++D+WS+K
Sbjct: 33 NNSFRALKFKPSCCSHQTIKVGVEITRKRKP-----------KPSFLDQIKDKWSLKPII 81
Query: 373 SQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSE-ESGGQALIEDPISFSLGNRIVSAPWI 549
S R KFPW S A+ SE + Q DP+S S +R++SAPW
Sbjct: 82 STREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSDPVSSSFPSRVISAPWS 141
Query: 550 PKSEISAPHFSSQTEITQNSCSKVDD 627
SE + PHF EI+ N SK++D
Sbjct: 142 HGSEFNEPHFDFVPEIS-NFESKIED 166
>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical
protein [Ricinus communis]
Length = 930
Score = 70.1 bits (170), Expect = 8e-10
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Frame = +1
Query: 193 QSSNTFRALRLETHCSY-QEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWSVKF 369
+S + F+A ET+CSY + I+V + +T+ RPSF+EQ+RD+WS+K
Sbjct: 52 RSHSPFKAFNFETNCSYSRSIQVSATKTKRKP------------RPSFFEQIRDKWSLKV 99
Query: 370 GSQRVKFPWXXXXXXXXXXXXXXXS---------SFVALDSSE-ESGGQALIEDPISFSL 519
S R FPW S V L +E ++ ++ +D +S SL
Sbjct: 100 PSTRDTFPWQEPEQQQEHQGQGKNDEEEIERCEISGVTLSKAEIDANPSSIDDDSVSVSL 159
Query: 520 GNRIVSAPWIPKSEISAPHFSSQTEITQN 606
N + +APW+ + HFSS+ +I +N
Sbjct: 160 PNHLTTAPWVHGTRPKKNHFSSRPKIGEN 188
>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X5 [Citrus sinensis]
Length = 803
Score = 62.0 bits (149), Expect = 2e-07
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Frame = +1
Query: 181 KTRNQSSNTFRALRLETHCSYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWS 360
K ++Q SN+FR++R+ S+ I+ + T+ ++PSF+EQ+R +WS
Sbjct: 27 KPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRK----------VKPSFFEQIRHKWS 76
Query: 361 VKFGSQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIEDPISFSLGNRIVSA 540
K S R KFPW + E + +P S +L NR VSA
Sbjct: 77 HKVISPREKFPWQEEEEEEEE----------VQNEPETDVESRVRSEPFSSALPNRFVSA 126
Query: 541 PWIPKSEISAPHFSS-QTEITQNSCSKVDDEEHFDSHEKRV 660
PWI ++ F S QT+IT + D+ S EK V
Sbjct: 127 PWIHGTDSKEIKFDSPQTKITTKK-EDIGDDGLLGSFEKTV 166
>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
gi|568843115|ref|XP_006475467.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
gi|568843117|ref|XP_006475468.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X3 [Citrus sinensis]
gi|568843119|ref|XP_006475469.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X4 [Citrus sinensis]
Length = 812
Score = 62.0 bits (149), Expect = 2e-07
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Frame = +1
Query: 181 KTRNQSSNTFRALRLETHCSYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWS 360
K ++Q SN+FR++R+ S+ I+ + T+ ++PSF+EQ+R +WS
Sbjct: 27 KPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRK----------VKPSFFEQIRHKWS 76
Query: 361 VKFGSQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIEDPISFSLGNRIVSA 540
K S R KFPW + E + +P S +L NR VSA
Sbjct: 77 HKVISPREKFPWQEEEEEEEE----------VQNEPETDVESRVRSEPFSSALPNRFVSA 126
Query: 541 PWIPKSEISAPHFSS-QTEITQNSCSKVDDEEHFDSHEKRV 660
PWI ++ F S QT+IT + D+ S EK V
Sbjct: 127 PWIHGTDSKEIKFDSPQTKITTKK-EDIGDDGLLGSFEKTV 166
>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
gi|557554714|gb|ESR64728.1| hypothetical protein
CICLE_v10007477mg [Citrus clementina]
Length = 810
Score = 62.0 bits (149), Expect = 2e-07
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Frame = +1
Query: 181 KTRNQSSNTFRALRLETHCSYQEIEVESKETQXXXXXXXXXXXXXXLRPSFYEQVRDRWS 360
K ++Q SN+FR++R+ S+ I+ + T+ ++PSF+EQ+R +WS
Sbjct: 25 KPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRK----------VKPSFFEQIRHKWS 74
Query: 361 VKFGSQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIEDPISFSLGNRIVSA 540
K S R KFPW + E + +P S +L NR VSA
Sbjct: 75 HKVISPREKFPWQEEEEEEEE----------VQNEPETDVESRVRSEPFSSALPNRFVSA 124
Query: 541 PWIPKSEISAPHFSS-QTEITQNSCSKVDDEEHFDSHEKRV 660
PWI ++ F S QT+IT + D+ S EK V
Sbjct: 125 PWIHGTDSKEIKFDSPQTKITTKK-EDIGDDGLLGSFEKTV 164
>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 859
Score = 58.2 bits (139), Expect = 3e-06
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Frame = +1
Query: 322 RPSFYEQVRDRWSVKFGSQRVKFPWXXXXXXXXXXXXXXXSSFVALDSSEESGGQALIED 501
+PSF+EQ++++WS K GS R KFPW +ES D
Sbjct: 79 KPSFFEQIQEKWSAKIGSTREKFPWQEESSQDEQEGDNEEEERETEIDVKESA-----SD 133
Query: 502 PISFSLGNRIVSAPWIPKSEISAPHFSSQTEITQNSCSKVDDEEHFD-----SHEKRVEI 666
+SF N +VSAPW ++ PH S+ E + S D + FD E+ EI
Sbjct: 134 SVSFGGKNGVVSAPWAHGTKPFKPHVVSEPETLEKS-DNGDFQREFDVGRDEISEEESEI 192
Query: 667 KRAARNVAEFKDEQKIEGFQSS 732
N D ++ ++S+
Sbjct: 193 SNNVMNGFSLDDVEESSDYKSN 214