BLASTX nr result
ID: Cocculus23_contig00041149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00041149
(262 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 76 6e-12
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 75 7e-12
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 74 2e-11
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 73 5e-11
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 72 8e-11
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 72 8e-11
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 72 8e-11
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 72 8e-11
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 71 2e-10
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 70 2e-10
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 70 2e-10
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 70 4e-10
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 69 5e-10
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 69 9e-10
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 68 1e-09
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 3e-09
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 67 3e-09
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 67 3e-09
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 66 6e-09
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 66 6e-09
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 75.9 bits (185), Expect = 6e-12
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = -2
Query: 258 IARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTPS 82
+ +PK EGGL +R K+ N V LKL+WR+ SLW KW+ E I+++S+ ++ Q+ S
Sbjct: 512 VCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTS 571
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
SW W IL +R +A S+ ++ +G G
Sbjct: 572 MGSWIWRKILKIRDVAKSFSRVEVGNG 598
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = -2
Query: 249 PKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPSQCSW 70
PK EGGL +R + N+ ++L+WRL V K+SLW W H ++ S ++ SW
Sbjct: 861 PKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSW 920
Query: 69 TW*GILMLRPLAHSYIKILIGKG 1
TW +L LRPLAH ++ +G G
Sbjct: 921 TWKRLLSLRPLAHQFLVCKVGNG 943
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
EI +PK+EGGL ++ ++ N+V LKL+WRL ++SLWVKW +K+ES +I T S
Sbjct: 585 EICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHS 644
Query: 81 QC-SWTW*GILMLRPLAHSYIKILIGKG 1
SW W +L R +A S+ KI + G
Sbjct: 645 TLGSWIWRRLLKHREVAKSFCKIEVNNG 672
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -2
Query: 258 IARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTPS 82
+ +PK+EGGL +R K+ N V LKL+W++ SLWVKW+ + ++ S + QT S
Sbjct: 865 VCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVS 924
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
Q SW W +L R +A + K+ +G G
Sbjct: 925 QGSWIWKKLLKYREVAKTLSKVEVGNG 951
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/87 (35%), Positives = 50/87 (57%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
EI +P+ EGGL +R+ +D NR + K+ W++ + LWVK + E+Y+K +Q+ S
Sbjct: 1379 EICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQS 1438
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
CSW W I+ + + IK +G G
Sbjct: 1439 NCSWGWRSIMKGKDVLAGAIKWNVGNG 1465
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/87 (35%), Positives = 50/87 (57%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
EI +P+ EGGL +R+ +D NR + K+ W++ + LWVK + E+Y+K +Q+ S
Sbjct: 847 EICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQS 906
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
CSW W I+ + + IK +G G
Sbjct: 907 NCSWGWRSIMKGKDVLAGAIKWNVGNG 933
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/87 (35%), Positives = 50/87 (57%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
EI +P+ EGGL +R+ +D NR + K+ W++ + LWVK + E+Y+K +Q+ S
Sbjct: 847 EICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQS 906
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
CSW W I+ + + IK +G G
Sbjct: 907 NCSWGWRSIMKGKDVLAGAIKWNVGNG 933
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = -2
Query: 258 IARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTPS 82
+ +PKEEGGL +R K+ N V LKL+WR+ +SLWVKWI +K+ S + + S
Sbjct: 114 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAVRENTS 173
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
SW W IL R +A + K+ I G
Sbjct: 174 LGSWMWRKILKFRDIARTLCKVEINNG 200
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = -2
Query: 258 IARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPSQ 79
+ RPK EGGL ++ K+ N V LKL+WR+ + +SLWV+WI +K + + ++ SQ
Sbjct: 383 VCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQ 442
Query: 78 CSWTW*GILMLRPLAHSYIKILIGKG 1
SW W +L R A ++ K+ I G
Sbjct: 443 GSWMWKKLLKYRDTAKAFSKVDIRNG 468
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = -2
Query: 258 IARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPSQ 79
+ RPK +GGLNI K N + +L LW LC + ++LWVKWIH YIK SV +
Sbjct: 678 VCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNN 737
Query: 78 CSWTW*GILMLRPLAHS 28
SW +L R H+
Sbjct: 738 FSWVLKNVLSQREYIHT 754
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTP 85
++ +PK+EGGL +R K+ N V LKL+WR+ +SLWVKWIH +K+ S + +
Sbjct: 246 DVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVRENT 305
Query: 84 SQCSWTW*GILMLRPLAHSYIKILIGKG 1
S SW W +L R A K + G
Sbjct: 306 SLGSWMWKKVLKFRDAAIQLCKAEVNNG 333
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -2
Query: 258 IARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTPS 82
+ +PKEEGGL +R K+ N V LKL+WR+ +SLWVKWI +K+ + + S
Sbjct: 195 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTS 254
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
SW W IL R +A + K+ I G
Sbjct: 255 LGSWMWRKILKFRDIARTLCKVEINNG 281
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQ-TP 85
++ +PK+EGGL +R K++N V LKL+WRL SLWV+WI + +K ++ +++ T
Sbjct: 281 DVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADTFWSVKATT 340
Query: 84 SQCSWTW*GILMLRPLAHSYIKILIGKG 1
++ SW W ++ R +A + K+ + G
Sbjct: 341 NRGSWMWSKLIKYRDVAKEFCKVEVRNG 368
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
++ +PK EGGL +R K+ N V LKL+WR+ +SLWVKW+ +K E ++ +
Sbjct: 417 QVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENA 476
Query: 81 QC-SWTW*GILMLRPLAHSYIKILIGKG 1
SW W IL R +A + K +G G
Sbjct: 477 NLGSWIWKKILKYRGVAKRFCKAEVGNG 504
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
++ PK GGLNI N++ ILKLLW +C + ++LW+KW+H YI+ +S+ ++
Sbjct: 677 KVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKK 736
Query: 81 QCSWTW*GILMLRPLAHSY 25
SW ++ LRPL Y
Sbjct: 737 SHSWIMSSMMKLRPLLLQY 755
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/87 (34%), Positives = 51/87 (58%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
+I +PK GG+ R + N +KLLW++ V K+++WVK + ++Y+KE+++ + PS
Sbjct: 859 KICQPKSVGGVGFRKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPS 918
Query: 81 QCSWTW*GILMLRPLAHSYIKILIGKG 1
SW W +L R ++ LIG G
Sbjct: 919 NASWQWKNLLRHRNFFSKGLRWLIGDG 945
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTP 85
E+ + KEEGGL ++ K+ N V +LKL+WR+ ++SLWVKW+++ I++E+ ++ +
Sbjct: 1011 EVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENT 1070
Query: 84 SQCSWTW*GILMLRPLAHSYIKILIGKG 1
SW W IL R A + ++ + G
Sbjct: 1071 GLGSWLWRKILKQRDKARLFHRMEVRSG 1098
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPS 82
+I +PK+EGGL +R + N V +LKL+WR+ +SLWVKW +K+ES ++ TP+
Sbjct: 269 DICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL-TPN 327
Query: 81 QC--SWTW*GILMLRPLAHSYIKILIGKG 1
SW W +L R A + ++ + G
Sbjct: 328 SSLGSWMWKKMLKYRETAKPFSRVEVNNG 356
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = -2
Query: 261 EIARPKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTI-QTP 85
++ +PK+EGGL +R K+ N V LK++W++ SLWVKWI + +K E+ + +
Sbjct: 821 DVCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFVKENT 880
Query: 84 SQCSWTW*GILMLRPLAHSYIKILIGKG 1
+ SW W ++ R A ++ K+ + KG
Sbjct: 881 TLGSWMWRKLIKFREKAKNFCKVEVNKG 908
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = -2
Query: 249 PKEEGGLNIRIPKDMNRVRILKLLWRLCVEKESLWVKWIHERYIKEESVQTIQTPSQCSW 70
PK EGGL +R N+ L+L+W L ++SLWV W H ++ + + S SW
Sbjct: 860 PKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSW 919
Query: 69 TW*GILMLRPLAHSYIKILIGKG 1
W IL LRPLA +++ +G G
Sbjct: 920 IWKAILGLRPLAKRFLRGAVGNG 942