BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00041053
         (559 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...   134   1e-29
ref|XP_007142776.1| hypothetical protein PHAVU_007G016000g [Phas...   134   2e-29
ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_003592711.1| Pentatricopeptide repeat-containing protein ...   132   5e-29
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...   132   6e-29
ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
ref|XP_002884496.1| pentatricopeptide repeat-containing protein ...   129   4e-28
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,...   129   4e-28
ref|XP_006856166.1| hypothetical protein AMTR_s00059p00175950 [A...   129   5e-28
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   128   9e-28
ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis th...   128   9e-28
gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thal...   128   9e-28
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi...   126   4e-27
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr...   126   4e-27
ref|XP_006300029.1| hypothetical protein CARUB_v10016253mg [Caps...   125   6e-27
emb|CBI27471.3| unnamed protein product [Vitis vinifera]              125   6e-27
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   125   1e-26

>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Glycine max]
          Length = 548

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/160 (40%), Positives = 100/160 (62%)
 Frame = +1

Query: 79  VSGKCLSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIIT 258
           +S   LS+LD   ++L L+Q+HA +    L ++   I+K+L FSA S+ GD+NYS  + +
Sbjct: 13  ISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFS 72

Query: 259 NVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRK 438
            + +P++F WNTIIRG+S SK P ++   + +M+  G+ PD  TYPF++KA +RL +   
Sbjct: 73  QLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQET 132

Query: 439 GQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           G  VH  IIKTG   D  I +SL+ +Y +CG     + +F
Sbjct: 133 GVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVF 172


>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  134 bits (338), Expect = 1e-29
 Identities = 62/155 (40%), Positives = 101/155 (65%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           +++LD   +ML L++IHA +  L L ++   ++K+L+FSA SD G++NYSC ++ ++ NP
Sbjct: 18  INILDKCNSMLELKKIHALVITLGLSQDEPFVSKILSFSALSDSGNINYSCWVLFSLLNP 77

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           ++F WNT+IRG+S+SK P  +   + +M+  G+ PD  TYPF++KA +RL     G  +H
Sbjct: 78  TIFNWNTVIRGYSKSKNPNGSISVFIQMLKVGVFPDYLTYPFLVKASARLLKRELGFSIH 137

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             IIK G   D  I +SL+ +Y S G++   R +F
Sbjct: 138 AHIIKHGFESDRFISNSLVHMYASFGDISCARYVF 172


>ref|XP_007142776.1| hypothetical protein PHAVU_007G016000g [Phaseolus vulgaris]
           gi|561015966|gb|ESW14770.1| hypothetical protein
           PHAVU_007G016000g [Phaseolus vulgaris]
          Length = 548

 Score =  134 bits (337), Expect = 2e-29
 Identities = 64/155 (41%), Positives = 98/155 (63%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           LS+L+   +ML L+Q+HA +    L ++   I+K+L FSA S+ GD+NYS  + + +  P
Sbjct: 18  LSLLEKCKSMLELKQLHAVVISFGLSQDDPFISKILCFSALSNSGDINYSYRVFSQLSIP 77

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           ++F WNTIIRG+S SK P  +   + +M+  G+ PD FTYPF++KA +RL +   G  VH
Sbjct: 78  TIFNWNTIIRGYSNSKTPVNSLSVFLKMLRLGVAPDYFTYPFLVKASARLLNQELGVSVH 137

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             II+TG   D  I +SL+ +Y SCG +   + +F
Sbjct: 138 AHIIQTGHESDRFIQNSLIHMYASCGNIMWAQKVF 172


>ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 442

 Score =  133 bits (335), Expect = 3e-29
 Identities = 63/155 (40%), Positives = 97/155 (62%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           +S+LD   +M  L++IHA +F L + ++    +KLL FSA S   DL+YS  +I NV NP
Sbjct: 17  ISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVPNP 76

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           + F WNT+IR FS +K P  +   + +M+ +G+ PD  TYPF++KA S+L +   G  VH
Sbjct: 77  TTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAVH 136

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             I+K+G  +D  I +SL+ +Y SC ++   R +F
Sbjct: 137 VHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVF 171


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  133 bits (335), Expect = 3e-29
 Identities = 63/155 (40%), Positives = 97/155 (62%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           +S+LD   +M  L++IHA +F L + ++    +KLL FSA S   DL+YS  +I NV NP
Sbjct: 17  ISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVPNP 76

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           + F WNT+IR FS +K P  +   + +M+ +G+ PD  TYPF++KA S+L +   G  VH
Sbjct: 77  TTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAVH 136

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             I+K+G  +D  I +SL+ +Y SC ++   R +F
Sbjct: 137 VHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVF 171


>ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481759|gb|AES62962.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  132 bits (333), Expect = 5e-29
 Identities = 64/160 (40%), Positives = 97/160 (60%)
 Frame = +1

Query: 79  VSGKCLSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIIT 258
           ++G  LS+LD   +ML L+++HA      L      I K+L+FSA S+ GD++YS  + +
Sbjct: 13  INGTLLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFS 72

Query: 259 NVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRK 438
            + +P++F WN IIRG+S SK P  +   + +M+  G+ PD  TYPF++KA +RL   + 
Sbjct: 73  QISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKS 132

Query: 439 GQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           G  VH QIIKTG   D  I +SL+ +Y SCG +     +F
Sbjct: 133 GVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVF 172


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score =  132 bits (332), Expect = 6e-29
 Identities = 65/173 (37%), Positives = 105/173 (60%)
 Frame = +1

Query: 40  VLRPSISMFVAKTVSGKCLSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATS 219
           +L   ++ F  ++ +   LS+L+    M  L+QIHAQMFK  L  N + +++LLAF   S
Sbjct: 4   ILPTPMNQFSLESNTTHTLSLLNRCSYMEELKQIHAQMFKKGLTVNTILVSRLLAFCTFS 63

Query: 220 DDGDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPF 399
           + G L Y+  +   +  P+ FMWNT++RG++ S +P++A + Y +M++  +  + +T+PF
Sbjct: 64  NSGSLAYAQMVFDRIIKPNTFMWNTMVRGYADSSEPEQALLLYRQMLSHSVSHNAYTFPF 123

Query: 400 VLKACSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           +LKACSRL    + QQ+H QIIK G S +    +SLL  Y   G +   R+IF
Sbjct: 124 LLKACSRLSALEETQQIHAQIIKFGFSSEVFATNSLLHAYAISGSIKSARLIF 176


>ref|XP_006484519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Citrus sinensis]
          Length = 537

 Score =  131 bits (329), Expect = 1e-28
 Identities = 63/160 (39%), Positives = 100/160 (62%)
 Frame = +1

Query: 79  VSGKCLSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIIT 258
           +S   +S+LD   +M  L+QI A +  L L  +   ++++L+FSA S  G+++YSC +++
Sbjct: 8   ISQVLISLLDKCKSMHSLKQIQALLITLGLSEDDPFVSRMLSFSALSYLGNIDYSCKVLS 67

Query: 259 NVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRK 438
           ++ NP +F WNT+IRG+S+SK P K+   + +M+ +G+ PD  TYPF+ KA  RL     
Sbjct: 68  HLSNPRIFYWNTVIRGYSKSKNPNKSISLFVKMLRAGVSPDHLTYPFLAKASGRLAKREL 127

Query: 439 GQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
              VH QI KTG   D  I +SL+ +Y SCG++   R +F
Sbjct: 128 AVAVHAQIAKTGYESDLFISNSLIHMYGSCGDIVHAREVF 167


>ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330336|gb|EFH60755.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 547

 Score =  129 bits (325), Expect = 4e-28
 Identities = 61/156 (39%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDG-DLNYSCSIITNVKN 270
           LS L+N  +M+ L Q+H  M K ++ RN + +++L+ F  T  +  +L+Y+ S+  ++  
Sbjct: 9   LSQLENCRSMVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 68

Query: 271 PSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQV 450
           PS+++WN++IRG+S S  P KA I+Y  M+  G  PD FT+P+VLKACS L D + G  V
Sbjct: 69  PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 128

Query: 451 HCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           H  ++KTG  ++ ++ + LL +Y  CGE+  G  +F
Sbjct: 129 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVF 164



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
 Frame = +1

Query: 226 GDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVL 405
           GD+  +  +   +   ++  WN+II G+SQ+   ++A   +S M++ GI PDK T+  V+
Sbjct: 247 GDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIAPDKVTFFSVI 306

Query: 406 KA-----CSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           +A     CS+L     GQ +H  + KTG   D+ I  +L+ +Y   G     + +F
Sbjct: 307 RASMIQGCSQL-----GQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKKMF 357


>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  129 bits (325), Expect = 4e-28
 Identities = 62/155 (40%), Positives = 97/155 (62%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           L++L    N+  L+QIH+Q+ K  L     A++KL+ F   S  GDL+Y+  +  ++  P
Sbjct: 28  LTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDLSYALLLFKSIGKP 87

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           +  +WN IIRG S S+ P  A  +Y  MI+SG  P+ +TYPFVLK+C+R+    +G+Q+H
Sbjct: 88  NQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPFVLKSCARISSTHEGKQIH 147

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
            QI+K G   D+ + +SL+ +Y   GELG  R++F
Sbjct: 148 GQILKLGFDNDAFVHTSLITMYVQNGELGNARLVF 182


>ref|XP_006856166.1| hypothetical protein AMTR_s00059p00175950 [Amborella trichopoda]
           gi|548860025|gb|ERN17633.1| hypothetical protein
           AMTR_s00059p00175950 [Amborella trichopoda]
          Length = 236

 Score =  129 bits (324), Expect = 5e-28
 Identities = 62/146 (42%), Positives = 90/146 (61%)
 Frame = +1

Query: 121 MLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNPSMFMWNTII 300
           M  L++IH  M    L R   A+ KLL+F A S  GDL+Y   +   ++ P+ FMWNTII
Sbjct: 1   MKDLKKIHGHMITNDLQREGYALEKLLSFCAVSPLGDLDYGFLVFNQIQEPNRFMWNTII 60

Query: 301 RGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVHCQIIKTGPS 480
           RGFS S  P++AF  Y +M+N G+ P+ FT+PFVLKAC++L   R+G+ VH  I K G +
Sbjct: 61  RGFSNSPYPKEAFFLYKQMLNQGLFPNNFTFPFVLKACTQLSSIREGKIVHTHITKLGFT 120

Query: 481 MDSHIDSSLLFLYTSCGELGMGRIIF 558
               + ++LL  Y + G + + R +F
Sbjct: 121 CQIVVQNALLHTYVASGSIPLARQLF 146



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 35/129 (27%), Positives = 58/129 (44%)
 Frame = +1

Query: 139 IHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNPSMFMWNTIIRGFSQS 318
           +H  + KL      V    LL     S  G +  +  +   + + ++  WN++I G+SQ 
Sbjct: 110 VHTHITKLGFTCQIVVQNALLHTYVAS--GSIPLARQLFDEITHKNIISWNSMIGGYSQQ 167

Query: 319 KQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVHCQIIKTGPSMDSHID 498
               KA  +++ M N GI PD+ T   +L  CS+  D   G+ +H  I K G   +  + 
Sbjct: 168 GHVDKALEFFTEMENLGIEPDEITIVSMLSVCSQTGDLEFGRSLHFCIAKKGQPQEKQVL 227

Query: 499 SSLLFLYTS 525
             L+ L  S
Sbjct: 228 LLLILLVLS 236


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  128 bits (322), Expect = 9e-28
 Identities = 56/155 (36%), Positives = 99/155 (63%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           L +L    ++   +QIHA + K  L     A++KL+ FSA S  GD++Y+ S+  +++ P
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           ++F+WN++IRG S S  P  A +++ RMI SG+ P+ +T+PF+LK+C++L    +G+Q+H
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             ++K G   D  I +SL+ +Y   GE+   +++F
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVF 187



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 29/111 (26%), Positives = 56/111 (50%)
 Frame = +1

Query: 226 GDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVL 405
           GDL  +  +  ++    +  WN +I G++     ++A   +  M+ SG+ P + T+  +L
Sbjct: 310 GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSIL 369

Query: 406 KACSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
            +C+ L     G+ +H  I K   S+ + + +SL+ LY  CG +   R +F
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420


>ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
           gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g05240 gi|332640689|gb|AEE74210.1|
           mitochondrial editing factor 19 [Arabidopsis thaliana]
          Length = 565

 Score =  128 bits (322), Expect = 9e-28
 Identities = 60/156 (38%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDG-DLNYSCSIITNVKN 270
           LS L+N  +++ L Q+H  M K ++ RN + +++L+ F  T  +  +L+Y+ S+  ++  
Sbjct: 10  LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69

Query: 271 PSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQV 450
           PS+++WN++IRG+S S  P KA I+Y  M+  G  PD FT+P+VLKACS L D + G  V
Sbjct: 70  PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129

Query: 451 HCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           H  ++KTG  ++ ++ + LL +Y  CGE+  G  +F
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVF 165



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = +1

Query: 226 GDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVL 405
           GDL  +  +   +   ++  WN+II G+SQ+   ++A   +  M++ GI PDK T+  V+
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324

Query: 406 KA-----CSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGE 534
           +A     CS+L     GQ +H  + KTG   D+ I  +L+ +Y   G+
Sbjct: 325 RASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367


>gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
          Length = 548

 Score =  128 bits (322), Expect = 9e-28
 Identities = 60/156 (38%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDG-DLNYSCSIITNVKN 270
           LS L+N  +++ L Q+H  M K ++ RN + +++L+ F  T  +  +L+Y+ S+  ++  
Sbjct: 10  LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69

Query: 271 PSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQV 450
           PS+++WN++IRG+S S  P KA I+Y  M+  G  PD FT+P+VLKACS L D + G  V
Sbjct: 70  PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129

Query: 451 HCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           H  ++KTG  ++ ++ + LL +Y  CGE+  G  +F
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVF 165



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = +1

Query: 226 GDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVL 405
           GDL  +  +   +   ++  WN+II G+SQ+   ++A   +  M++ GI PDK T+  V+
Sbjct: 248 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 307

Query: 406 KA-----CSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGE 534
           +A     CS+L     GQ +H  + KTG   D+ I  +L+ +Y   G+
Sbjct: 308 RASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 350


>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 736

 Score =  126 bits (316), Expect = 4e-27
 Identities = 56/155 (36%), Positives = 95/155 (61%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           L++L    NM +++Q+H+Q+ K  L     A++KL+   A S  GDL+Y+  +   ++ P
Sbjct: 34  LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           +  +WN IIRG S S  P  A  +Y RMI SG +P+ +T+PF+LK+C+++    +G+Q+H
Sbjct: 94  NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIH 153

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             ++K G   D  + +SL+ +Y   GEL   R++F
Sbjct: 154 AHVLKLGLESDPFVHTSLINMYAQNGELESARLVF 188


>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
           gi|557554208|gb|ESR64222.1| hypothetical protein
           CICLE_v10010823mg [Citrus clementina]
          Length = 736

 Score =  126 bits (316), Expect = 4e-27
 Identities = 56/155 (36%), Positives = 95/155 (61%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           L++L    NM +++Q+H+Q+ K  L     A++KL+   A S  GDL+Y+  +   ++ P
Sbjct: 34  LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           +  +WN IIRG S S  P  A  +Y RMI SG +P+ +T+PF+LK+C+++    +G+Q+H
Sbjct: 94  NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIH 153

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
             ++K G   D  + +SL+ +Y   GEL   R++F
Sbjct: 154 AHVLKLGLESDPFVHTSLINMYAQNGELESARLVF 188


>ref|XP_006300029.1| hypothetical protein CARUB_v10016253mg [Capsella rubella]
           gi|482568738|gb|EOA32927.1| hypothetical protein
           CARUB_v10016253mg [Capsella rubella]
          Length = 564

 Score =  125 bits (315), Expect = 6e-27
 Identities = 60/156 (38%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDG-DLNYSCSIITNVKN 270
           LS L+N   M+ L Q+H  M K ++ RN + +++++ F  TS +  +L+Y+ S+  ++  
Sbjct: 9   LSQLENCRFMVELNQLHGLMIKSSVIRNVIPLSRVIDFCTTSPETMNLSYARSVFESIGC 68

Query: 271 PSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQV 450
           PS+++WN++IRG+S S  P KA I+Y  M+  G  PD FT+P+VLKACS L D + G  V
Sbjct: 69  PSVYIWNSMIRGYSNSTNPDKALIFYEEMLRKGYSPDYFTFPYVLKACSGLRDVQFGSCV 128

Query: 451 HCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           H  ++KTG  ++ ++ + LL +Y  C E+  G  +F
Sbjct: 129 HGYVVKTGFGVNMYVSTCLLHMYMCCEEVNCGLRVF 164


>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  125 bits (315), Expect = 6e-27
 Identities = 61/173 (35%), Positives = 103/173 (59%)
 Frame = +1

Query: 40  VLRPSISMFVAKTVSGKCLSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATS 219
           +L    S   +++ + + L +L    NM  L+QIH QM K  L  + +  +KLLAF A+ 
Sbjct: 4   ILCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASP 63

Query: 220 DDGDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPF 399
           + G L Y+ ++   +  P+ FMWNT+IRG+S SK+P++A + Y  M+   +  + +T+PF
Sbjct: 64  NSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPF 123

Query: 400 VLKACSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           +LKACS +    + QQ+H  IIK G   + +  +SLL +Y+  G++   R++F
Sbjct: 124 LLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLF 176


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  125 bits (315), Expect = 6e-27
 Identities = 61/173 (35%), Positives = 103/173 (59%)
 Frame = +1

Query: 40  VLRPSISMFVAKTVSGKCLSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATS 219
           +L    S   +++ + + L +L    NM  L+QIH QM K  L  + +  +KLLAF A+ 
Sbjct: 4   ILCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASP 63

Query: 220 DDGDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPF 399
           + G L Y+ ++   +  P+ FMWNT+IRG+S SK+P++A + Y  M+   +  + +T+PF
Sbjct: 64  NSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPF 123

Query: 400 VLKACSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
           +LKACS +    + QQ+H  IIK G   + +  +SLL +Y+  G++   R++F
Sbjct: 124 LLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLF 176


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508783730|gb|EOY30986.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 847

 Score =  125 bits (313), Expect = 1e-26
 Identities = 58/155 (37%), Positives = 95/155 (61%)
 Frame = +1

Query: 94  LSMLDNIINMLHLQQIHAQMFKLALDRNAVAIAKLLAFSATSDDGDLNYSCSIITNVKNP 273
           LS+L     +  L+Q+H  + K  L     A++KL+ F A S  GDL Y+  +  ++  P
Sbjct: 92  LSLLSKCRTIQTLKQVHCHIIKTGLHHTQFALSKLIEFCAVSPFGDLPYALLLFESIDEP 151

Query: 274 SMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVLKACSRLFDFRKGQQVH 453
           +  +WNT+IRGFS S  P     +Y +MI SGI+P+ +T+PFVLK+C++    ++G+Q+H
Sbjct: 152 NQVIWNTMIRGFSLSSSPGLTLEFYVKMIWSGIVPNSYTFPFVLKSCAKTASTQEGKQIH 211

Query: 454 CQIIKTGPSMDSHIDSSLLFLYTSCGELGMGRIIF 558
            Q++K G   D+ + +SL+ +Y   GE G  R++F
Sbjct: 212 GQVLKLGLESDAFVHTSLINMYAQNGEFGNARLVF 246



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
 Frame = +1

Query: 133 QQIHAQMFKLALDRNAVAIAKLLAFSATSDD----------------------------- 225
           +QIH Q+ KL L+ +A     L+   A + +                             
Sbjct: 208 KQIHGQVLKLGLESDAFVHTSLINMYAQNGEFGNARLVFDKSHLRDTVSYTALITGYVSI 267

Query: 226 GDLNYSCSIITNVKNPSMFMWNTIIRGFSQSKQPQKAFIWYSRMINSGILPDKFTYPFVL 405
           G +  +  +   +    +  WN +I G++Q+ Q ++A  ++  MI + ++P++ T   VL
Sbjct: 268 GYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMIGANVVPNESTLVSVL 327

Query: 406 KACSRLFDFRKGQQVHCQIIKTGPSMDSHIDSSLLFLYTSCGEL 537
            AC++      G  V   I + G   + H+ ++L+ +Y+ CG+L
Sbjct: 328 SACAQSGSLELGTWVRSWINEHGLGSNIHLANALIDMYSKCGDL 371