BLASTX nr result
ID: Cocculus23_contig00040919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040919
(344 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHI16402.1| nad6, partial (mitochondrion) [Triticum turgidum ... 82 6e-14
gb|AGI48801.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lol... 82 6e-14
ref|YP_398421.1| nad6 [Triticum aestivum] gi|556927002|ref|YP_00... 82 6e-14
gb|ADE08099.1| nad6-1 [Triticum aestivum] gi|291498626|gb|ADE081... 82 6e-14
ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulga... 82 8e-14
ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera... 82 8e-14
ref|XP_006364255.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 80 2e-13
emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. marit... 80 4e-13
gb|AHC94298.1| NADH dehydrogenase subunit 6, partial (mitochondr... 74 2e-11
gb|AHA47115.1| NADH dehydrogenase subunit 6 (mitochondrion) [Amb... 74 2e-11
gb|ABC18241.1| NADH dehydrogenase subunit 6 [Brassica oleracea v... 74 2e-11
sp|P60497.1|NU6M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct... 74 2e-11
ref|YP_717162.1| NADH dehydrogenase subunit 6 [Brassica napus] g... 74 2e-11
ref|YP_005090490.1| NADH dehydrogenase subunit 6 (mitochondrion)... 74 2e-11
ref|YP_005090449.1| NADH dehydrogenase subunit 6 (mitochondrion)... 74 2e-11
ref|YP_588429.1| NADH dehydrogenase subunit 6 [Zea mays subsp. m... 74 2e-11
gb|AAF86489.1|AF279442_1 NADH dehydrogenase subunit 6 [Lupinus l... 74 2e-11
gb|EPS74656.1| hypothetical protein M569_00092, partial [Genlise... 73 4e-11
ref|YP_008802508.1| NADH dehydrogenase subunit 6 (mitochondrion)... 72 6e-11
ref|YP_003875484.1| NADH dehydrogenase subunit 6 [Silene latifol... 72 6e-11
>gb|AHI16402.1| nad6, partial (mitochondrion) [Triticum turgidum subsp. durum]
Length = 230
Score = 82.4 bits (202), Expect = 6e-14
Identities = 54/90 (60%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = -2
Query: 337 MLVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 158
M +LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 157 XXXLDFFAMIFLVVCIGAIAV--LFVVTPF 74
LDF AMI VV IGAIAV LFVV F
Sbjct: 61 LLGLDFSAMISPVVHIGAIAVSFLFVVMMF 90
>gb|AGI48801.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lolium perenne]
Length = 314
Score = 82.4 bits (202), Expect = 6e-14
Identities = 54/90 (60%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = -2
Query: 337 MLVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 158
M +LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 157 XXXLDFFAMIFLVVCIGAIAV--LFVVTPF 74
LDF AMI VV IGAIAV LFVV F
Sbjct: 61 LLGLDFSAMISPVVHIGAIAVSFLFVVMMF 90
>ref|YP_398421.1| nad6 [Triticum aestivum] gi|556927002|ref|YP_008757360.1| NADH
dehydrogenase subunit 6 (mitochondrion) [Aegilops
speltoides] gi|556927209|ref|YP_008758166.1| NADH
dehydrogenase subunit 6 (mitochondrion) [Triticum
timopheevii] gi|400642|sp|Q02500.1|NU6M_WHEAT RecName:
Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|21826|emb|CAA44009.1| NADH dehydrogenase (ubiquinone)
[Triticum aestivum] gi|78675261|dbj|BAE47686.1| nad6
[Triticum aestivum] gi|169649070|gb|ACA62631.1| nad6
[Triticum aestivum] gi|549067756|dbj|BAN94728.1| NADH
dehydrogenase subunit 6 (mitochondrion) [Triticum
timopheevii] gi|549067766|dbj|BAN94737.1| NADH
dehydrogenase subunit 6 (mitochondrion) [Aegilops
speltoides] gi|578888268|gb|AHI16372.1| nad6
(mitochondrion) [Triticum turgidum subsp. durum]
Length = 247
Score = 82.4 bits (202), Expect = 6e-14
Identities = 54/90 (60%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = -2
Query: 337 MLVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 158
M +LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 157 XXXLDFFAMIFLVVCIGAIAV--LFVVTPF 74
LDF AMI VV IGAIAV LFVV F
Sbjct: 61 LLGLDFSAMISPVVHIGAIAVSFLFVVMMF 90
>gb|ADE08099.1| nad6-1 [Triticum aestivum] gi|291498626|gb|ADE08100.1| nad6-2
[Triticum aestivum]
Length = 305
Score = 82.4 bits (202), Expect = 6e-14
Identities = 54/90 (60%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = -2
Query: 337 MLVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 158
M +LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 157 XXXLDFFAMIFLVVCIGAIAV--LFVVTPF 74
LDF AMI VV IGAIAV LFVV F
Sbjct: 61 LLGLDFSAMISPVVHIGAIAVSFLFVVMMF 90
>ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435071|ref|YP_004222289.1| hypothetical protein
BevumaM_p051 [Beta vulgaris subsp. maritima]
gi|346683271|ref|YP_004842203.1| hypothetical protein
BemaM_p159 [Beta macrocarpa] gi|9049347|dbj|BAA99357.1|
orf169 [Beta vulgaris subsp. vulgaris]
gi|317905724|emb|CBJ14109.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439804|emb|CBJ17516.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500189|emb|CBX25008.1| hypothetical protein [Beta
macrocarpa] gi|384939187|emb|CBL52034.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 169
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 209 MYRIFSTYNHQTRDQSKARQNRKYHGTSSFPEMELSCW 322
MYRIFSTYNHQTRDQS+ARQNRKYHGTSSF EMELSCW
Sbjct: 1 MYRIFSTYNHQTRDQSRARQNRKYHGTSSFTEMELSCW 38
>ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
gi|209954195|emb|CAQ77660.1| NADH dehydrogenase subunit
6 [Vitis vinifera] gi|239764731|gb|ACS15202.1| NADH
dehydrogenase subunit 6 [Vitis vinifera]
Length = 223
Score = 82.0 bits (201), Expect = 8e-14
Identities = 54/91 (59%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = -2
Query: 337 MLVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 158
M VLAPA KFHFREGRRTMI RAKNPVHSVLF I VF +TS
Sbjct: 1 MRVLAPALKFHFREGRRTMILSVSSSPALVSGLMVARAKNPVHSVLFPIPVFRNTSGLLL 60
Query: 157 XXXLDFFAMIFLVVCIGAIAV--LFVVTPFY 71
LDF AMIF VV IGAIAV LFVV F+
Sbjct: 61 LLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 91
>ref|XP_006364255.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 6-like [Solanum tuberosum]
Length = 349
Score = 80.5 bits (197), Expect = 2e-13
Identities = 52/91 (57%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = -2
Query: 337 MLVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 158
ML LAPA KFHFREGRRTMI VRA NPVHSV F I VF +TS
Sbjct: 1 MLFLAPAXKFHFREGRRTMILSILSRPALVSGLMVVRAXNPVHSVCFXIPVFRNTSGLLL 60
Query: 157 XXXLDFFAMIFLVVCIGAIA--VLFVVTPFY 71
LDFFAMIF VV IGAIA LF+V F+
Sbjct: 61 LLGLDFFAMIFPVVYIGAIAGSFLFIVMMFH 91
>emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 169
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +2
Query: 209 MYRIFSTYNHQTRDQSKARQNRKYHGTSSFPEMELSCW 322
MYRI STYNHQTRDQS+ARQNRKYHGTSSF EMELSCW
Sbjct: 1 MYRILSTYNHQTRDQSRARQNRKYHGTSSFTEMELSCW 38
>gb|AHC94298.1| NADH dehydrogenase subunit 6, partial (mitochondrion) [Amborella
trichopoda]
Length = 178
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 11 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 58
>gb|AHA47115.1| NADH dehydrogenase subunit 6 (mitochondrion) [Amborella trichopoda]
Length = 209
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>gb|ABC18241.1| NADH dehydrogenase subunit 6 [Brassica oleracea var. botrytis]
Length = 201
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>sp|P60497.1|NU6M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
Length = 205
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>ref|YP_717162.1| NADH dehydrogenase subunit 6 [Brassica napus]
gi|37591109|dbj|BAC98911.1| NADH dehydrogenase subunit 6
[Brassica napus]
Length = 205
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>ref|YP_005090490.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lotus japonicus]
gi|357197354|gb|AET62950.1| NADH dehydrogenase subunit 6
(mitochondrion) [Lotus japonicus]
Length = 205
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>ref|YP_005090449.1| NADH dehydrogenase subunit 6 (mitochondrion) [Millettia pinnata]
gi|357197312|gb|AET62909.1| NADH dehydrogenase subunit 6
(mitochondrion) [Millettia pinnata]
Length = 205
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>ref|YP_588429.1| NADH dehydrogenase subunit 6 [Zea mays subsp. mays]
gi|40795022|gb|AAR91066.1| NADH dehydrogenase subunit 6
(mitochondrion) [Zea mays]
Length = 220
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLILLGLDFFAMIFLVVYIGAIAVLFL 66
>gb|AAF86489.1|AF279442_1 NADH dehydrogenase subunit 6 [Lupinus luteus]
Length = 205
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>gb|EPS74656.1| hypothetical protein M569_00092, partial [Genlisea aurea]
Length = 214
Score = 73.2 bits (178), Expect = 4e-11
Identities = 49/82 (59%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = -2
Query: 313 KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXXXXXLDFFA 134
KFHFRE RTMI VRAKNPVHSVLF I VF +TS LDFFA
Sbjct: 1 KFHFREVERTMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLFLGLDFFA 60
Query: 133 MIFLVVCIGAIAV--LFVVTPF 74
MIFLVV IGAIAV LFVV F
Sbjct: 61 MIFLVVHIGAIAVSFLFVVMMF 82
>ref|YP_008802508.1| NADH dehydrogenase subunit 6 (mitochondrion) [Asclepias syriaca]
gi|556562346|gb|AGZ63042.1| NADH dehydrogenase subunit 6
(mitochondrion) [Asclepias syriaca]
Length = 205
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/48 (79%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFC+TS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66
>ref|YP_003875484.1| NADH dehydrogenase subunit 6 [Silene latifolia]
gi|301338031|gb|ADK73323.1| NADH dehydrogenase subunit 6
[Silene latifolia]
Length = 205
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/48 (79%), Positives = 40/48 (83%)
Frame = -2
Query: 229 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVCIGAIAVLFV 86
RAKNPVHSVLFFILVFC+TS LDFFAMIFLVV IGAIAVLF+
Sbjct: 19 RAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVLFL 66