BLASTX nr result
ID: Cocculus23_contig00040678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040678
(710 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EDL80841.1| rCG30666, isoform CRA_b [Rattus norvegicus] 71 4e-10
gb|EDL80840.1| rCG30666, isoform CRA_a [Rattus norvegicus] 71 4e-10
ref|XP_002613412.1| hypothetical protein BRAFLDRAFT_227159 [Bran... 69 2e-09
sp|Q05793.1|PGBM_MOUSE RecName: Full=Basement membrane-specific ... 68 3e-09
ref|XP_006538638.1| PREDICTED: basement membrane-specific hepara... 68 3e-09
ref|XP_006538637.1| PREDICTED: basement membrane-specific hepara... 68 3e-09
ref|XP_006538636.1| PREDICTED: basement membrane-specific hepara... 68 3e-09
ref|XP_006538635.1| PREDICTED: basement membrane-specific hepara... 68 3e-09
ref|XP_006538634.1| PREDICTED: basement membrane-specific hepara... 68 3e-09
ref|NP_032331.2| basement membrane-specific heparan sulfate prot... 68 3e-09
gb|AAH94353.1| Hspg2 protein, partial [Mus musculus] 68 3e-09
gb|AAH85618.1| Hspg2 protein, partial [Mus musculus] 68 3e-09
ref|XP_006736303.1| PREDICTED: neurogenic locus notch homolog pr... 67 4e-09
ref|XP_006736302.1| PREDICTED: neurogenic locus notch homolog pr... 67 4e-09
ref|XP_005081163.1| PREDICTED: basement membrane-specific hepara... 66 1e-08
ref|XP_006823548.1| PREDICTED: neurogenic locus notch homolog pr... 65 2e-08
gb|ELU12153.1| hypothetical protein CAPTEDRAFT_204698, partial [... 65 2e-08
ref|XP_798028.3| PREDICTED: fibrillin-2-like [Strongylocentrotus... 65 2e-08
ref|XP_001198160.2| PREDICTED: neurogenic locus notch homolog pr... 65 2e-08
ref|XP_007459372.1| PREDICTED: basement membrane-specific hepara... 65 3e-08
>gb|EDL80841.1| rCG30666, isoform CRA_b [Rattus norvegicus]
Length = 648
Score = 70.9 bits (172), Expect = 4e-10
Identities = 43/131 (32%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ Q+PC G + +C
Sbjct: 364 SPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLQEPCLNGGTCRGTRC- 422
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 423 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFHDNGFLAL 472
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 473 PG-NSFSRSLP 482
>gb|EDL80840.1| rCG30666, isoform CRA_a [Rattus norvegicus]
Length = 1311
Score = 70.9 bits (172), Expect = 4e-10
Identities = 43/131 (32%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ Q+PC G + +C
Sbjct: 1027 SPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLQEPCLNGGTCRGTRC- 1085
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 1086 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFHDNGFLAL 1135
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 1136 PG-NSFSRSLP 1145
>ref|XP_002613412.1| hypothetical protein BRAFLDRAFT_227159 [Branchiostoma floridae]
gi|229298797|gb|EEN69421.1| hypothetical protein
BRAFLDRAFT_227159 [Branchiostoma floridae]
Length = 737
Score = 68.9 bits (167), Expect = 2e-09
Identities = 41/107 (38%), Positives = 52/107 (48%)
Frame = -1
Query: 641 CLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTDFSSYKCQCA 462
C+D G EC G E RRC+R + N C S PC N GQCV D +SY C+C
Sbjct: 345 CVDLVNGYHCECTLGF----EGRRCQRNI----NECLSNPCRNGGQCVDGD-NSYTCRCP 395
Query: 461 PGFDGQNCELDARVCQTQQPCGQSQDVKCQSFRFGAALDHICILQGG 321
GF G+NCE+D C PC D +C + D+ C + G
Sbjct: 396 LGFVGRNCEIDVDFC-NPNPC--QNDAQC----YNLETDYFCQCRDG 435
Score = 57.4 bits (137), Expect = 5e-06
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Frame = -1
Query: 623 GEIQECPRGLVFHQESR---RCE-------RKLGALENPCSSQPCLNNGQCVQTDFSSYK 474
G Q C G H E RCE R E PC S PC N GQC + + ++
Sbjct: 181 GRHQPCLNGGTCHNEDPDEYRCECLEGFSGRSCEIAEQPCVSNPCQNGGQCTEVS-NGFR 239
Query: 473 CQCAPGFDGQNCELDARVCQTQQPC 399
C CA G+ G C++D C+ PC
Sbjct: 240 CTCALGWTGDTCDIDIDDCKEPNPC 264
>sp|Q05793.1|PGBM_MOUSE RecName: Full=Basement membrane-specific heparan sulfate proteoglycan
core protein; Short=HSPG; Contains: RecName:
Full=Endorepellin; Contains: RecName: Full=LG3 peptide;
Flags: Precursor gi|200296|gb|AAA39911.1| perlecan [Mus
musculus]
Length = 3707
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 3423 SPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 3481
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 3482 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 3531
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 3532 PG-NSFSRSLP 3541
>ref|XP_006538638.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein isoform X5 [Mus musculus]
Length = 4381
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 4097 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 4155
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 4156 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 4205
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 4206 PG-NSFSRSLP 4215
>ref|XP_006538637.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein isoform X4 [Mus musculus]
Length = 3174
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 2890 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 2948
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 2949 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 2998
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 2999 PG-NSFSRSLP 3008
>ref|XP_006538636.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein isoform X3 [Mus musculus]
Length = 4387
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 4103 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 4161
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 4162 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 4211
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 4212 PG-NSFSRSLP 4221
>ref|XP_006538635.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein isoform X2 [Mus musculus]
Length = 4398
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 4114 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 4172
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 4173 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 4222
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 4223 PG-NSFSRSLP 4232
>ref|XP_006538634.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein isoform X1 [Mus musculus]
Length = 4404
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 4120 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 4178
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 4179 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 4228
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 4229 PG-NSFSRSLP 4238
>ref|NP_032331.2| basement membrane-specific heparan sulfate proteoglycan core protein
precursor [Mus musculus]
Length = 4383
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 4099 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 4157
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 4158 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 4207
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 4208 PG-NSFSRSLP 4217
>gb|AAH94353.1| Hspg2 protein, partial [Mus musculus]
Length = 834
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 550 SPCERQPCQNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 608
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 609 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 658
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 659 PG-NSFSRSLP 668
>gb|AAH85618.1| Hspg2 protein, partial [Mus musculus]
Length = 1100
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ +PC G + +C
Sbjct: 816 SPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARC- 874
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S HP G D GQ+ F D GF+
Sbjct: 875 ----------LCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGL 924
Query: 218 GGENMFVESCP 186
G N F S P
Sbjct: 925 PG-NSFSRSLP 934
>ref|XP_006736303.1| PREDICTED: neurogenic locus notch homolog protein 4 isoform X2
[Leptonychotes weddellii]
Length = 1993
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = -1
Query: 644 VCLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTDFSSYKCQC 465
VC+D CP G E C+ ++ NPC S+PC + C+ S Y CQC
Sbjct: 899 VCIDSGSSYFCRCPPGF----EGGVCQDRV----NPCESRPCQHGATCIAQP-SGYLCQC 949
Query: 464 APGFDGQNCELDARVCQTQQPC 399
APG+ GQNC ++ VCQ+ QPC
Sbjct: 950 APGYSGQNCSKESNVCQS-QPC 970
>ref|XP_006736302.1| PREDICTED: neurogenic locus notch homolog protein 4 isoform X1
[Leptonychotes weddellii]
Length = 1996
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = -1
Query: 644 VCLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTDFSSYKCQC 465
VC+D CP G E C+ ++ NPC S+PC + C+ S Y CQC
Sbjct: 899 VCIDSGSSYFCRCPPGF----EGGVCQDRV----NPCESRPCQHGATCIAQP-SGYLCQC 949
Query: 464 APGFDGQNCELDARVCQTQQPC 399
APG+ GQNC ++ VCQ+ QPC
Sbjct: 950 APGYSGQNCSKESNVCQS-QPC 970
>ref|XP_005081163.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Mesocricetus auratus]
Length = 3602
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ Q+PC G + C
Sbjct: 3318 SPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLQEPCLNGGTCRGAHC- 3376
Query: 371 SFRFGAALDHICI-------LQGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C+ Q GA YG+ S H G D GQ+ F D GF+
Sbjct: 3377 ----------LCLPGFSGPRCQQGAGYGVVESDWHLEGSGGNDAPGQYGAYFHDNGFLGL 3426
Query: 218 GGENMFVESCP 186
G N+F S P
Sbjct: 3427 PG-NIFSRSLP 3436
>ref|XP_006823548.1| PREDICTED: neurogenic locus notch homolog protein 1-like
[Saccoglossus kowalevskii]
Length = 1978
Score = 65.5 bits (158), Expect = 2e-08
Identities = 39/108 (36%), Positives = 50/108 (46%)
Frame = -1
Query: 644 VCLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTDFSSYKCQC 465
VC+DE G CP G C++ E+ C+ PCLNNG C T + + C C
Sbjct: 586 VCVDEIDGFTCICPSGFT----GDYCQQD----EDDCNPNPCLNNGICADTGTNVFMCFC 637
Query: 464 APGFDGQNCELDARVCQTQQPCGQSQDVKCQSFRFGAALDHICILQGG 321
A G+DGQ CE A PC D+ C A D++CI Q G
Sbjct: 638 ADGYDGQYCENTASDPCDSNPC--VNDINC----INAGDDYVCICQPG 679
>gb|ELU12153.1| hypothetical protein CAPTEDRAFT_204698, partial [Capitella teleta]
Length = 2612
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/81 (40%), Positives = 42/81 (51%)
Frame = -1
Query: 641 CLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTDFSSYKCQCA 462
C+DE G I +C G E CE L N C+S PCLN G+C+ Y C+CA
Sbjct: 611 CVDEIDGYICQCQPGA----EGVHCEINL----NECNSSPCLNEGECID-QLGKYACECA 661
Query: 461 PGFDGQNCELDARVCQTQQPC 399
PGF+G CE++ C PC
Sbjct: 662 PGFEGDLCEINTNEC-ASSPC 681
Score = 60.8 bits (146), Expect = 4e-07
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = -1
Query: 644 VCLDESKGEIQECPRGLVFHQE----SRRCERKLGALENPCSSQPCLNNGQCVQTDFSSY 477
+C+D+ G +CP G++ CE + + C+S PCLN+ C Q + Y
Sbjct: 2339 ICIDKVNGYRCDCPTGVIVKMTYEFLGSNCEENV----DECASDPCLNDASC-QDGYGVY 2393
Query: 476 KCQCAPGFDGQNCELDARVCQTQQPCGQSQDVKC 375
+C+C GF G+NCE+D C PC D C
Sbjct: 2394 ECKCLAGFKGKNCEIDIDEC-LSNPC--QNDATC 2424
Score = 58.9 bits (141), Expect = 2e-06
Identities = 31/81 (38%), Positives = 38/81 (46%)
Frame = -1
Query: 641 CLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTDFSSYKCQCA 462
C+D G C RG+ CE EN C S PC NNG C F Y C C
Sbjct: 839 CVDRLNGFECRCQRGV----SGLTCELN----ENECRSNPCFNNGSCAD-GFGQYICHCQ 889
Query: 461 PGFDGQNCELDARVCQTQQPC 399
PG+ G NCE++ C++ PC
Sbjct: 890 PGWTGSNCEVNVDNCES-SPC 909
>ref|XP_798028.3| PREDICTED: fibrillin-2-like [Strongylocentrotus purpuratus]
Length = 3087
Score = 65.1 bits (157), Expect = 2e-08
Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Frame = -1
Query: 671 PLDNGRRFVVCLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQT 492
P NG CL +S G C F E CE ++ PC S PCLN C ++
Sbjct: 2191 PCQNG---ATCLTQSSGSTYTCLCPSRF--EGLNCETEI----QPCISSPCLNGATCFES 2241
Query: 491 DFSSYKCQCAPGFDGQNCELDARVCQTQQPCGQSQDVKCQSFRFGAALDHICI--LQGGA 318
D +S+ C C GF+G NCE++ VC + PC + C + G A +C +G
Sbjct: 2242 DGASFTCLCPAGFEGTNCEIELSVCDS-SPC--VNNGTCFTHSNGEAYTCVCPTGFEGNN 2298
Query: 317 AYGLTASQAHPS-PC-NGVDGQFPLAFSDKGFIMCGG 213
++A A S PC NG FS G + G
Sbjct: 2299 CENISAMPACDSNPCLNGATCMDREEFSAYGCLCPAG 2335
Score = 57.0 bits (136), Expect = 6e-06
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Frame = -1
Query: 542 NPCSSQPCLNNGQC-VQTDFSSYKCQCAPGFDGQNCELDARVCQT--QQPCGQSQDVKCQ 372
NPC S+PC N G+C Q+D ++Y+C C F G NCE V QT P G + CQ
Sbjct: 371 NPCMSEPCQNGGRCFAQSDNTAYRCICPGNFFGTNCEAVLTVQQTTVAPPTGSCTSLPCQ 430
Query: 371 S----FRFGAALDHICILQGG 321
+ F G D+ C+ G
Sbjct: 431 NGGMCFMSGDDTDYTCVCPPG 451
Score = 56.6 bits (135), Expect = 8e-06
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = -1
Query: 641 CLDESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQCVQTD-FSSYKCQC 465
C D + G C F E CE + + C+S PCLN C ++ SSY C C
Sbjct: 2439 CFDSNGGSSYVCLCSAGF--EGSNCENETLS----CASNPCLNGATCFDSNGGSSYACLC 2492
Query: 464 APGFDGQNCELDARVCQTQQPCGQSQDVKCQSFRFGAALDHICILQGG 321
PGF+G NCE + C PC D C + G +ICI G
Sbjct: 2493 PPGFEGTNCENETNAC-VSTPC--QNDAVCFNTALGG---YICICAEG 2534
>ref|XP_001198160.2| PREDICTED: neurogenic locus notch homolog protein 2-like
[Strongylocentrotus purpuratus]
Length = 2755
Score = 65.1 bits (157), Expect = 2e-08
Identities = 41/125 (32%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Frame = -1
Query: 632 ESKGEIQECPRGLVFHQESRRCERKLGALENPCSSQPCLNNGQC--VQTDFSSYKCQCAP 459
+S + CP G CE ++ +PC+ PCLN C Q S Y+C C P
Sbjct: 1943 QSGSYVCSCPTGFT----GNNCE----SIVSPCNPSPCLNGAACSVTQGQSSDYQCNCVP 1994
Query: 458 GFDGQNCELDARVCQTQQPCGQSQDVKCQSFRFGAALDHICILQGGAAYGLTASQAH--- 288
GF G+NCE T PC + V+ Q F G +D+ CI G G T ++
Sbjct: 1995 GFLGENCE-------TADPCSSNPCVRGQCFLSGTNVDYFCICPTGYT-GSTCNEIEDRC 2046
Query: 287 -PSPC 276
SPC
Sbjct: 2047 ASSPC 2051
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = -1
Query: 695 GQAAETVI------PLDNGRRFVVCLDESKGEIQECPRGLVFHQESRRCERKLGALENPC 534
G ETV+ P NG C+D + G +C G E CE + PC
Sbjct: 563 GPDCETVVLACSSNPCQNG---ATCMDSNPGYACQCAAGY----EGDTCELLTQVTDPPC 615
Query: 533 SSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC 399
+S PC N+G C + + Y C+C GF+G NCEL C + PC
Sbjct: 616 ASLPCQNDGVCSEVG-TEYSCECPVGFNGVNCELVELAC-SSSPC 658
Score = 57.0 bits (136), Expect = 6e-06
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -1
Query: 548 LENPCSSQPCLNNGQCVQT-DFSSYKCQCAPGFDGQNCEL 432
++ PC+S PCLNNG+CV T D Y C+CAP F G NCE+
Sbjct: 2706 IDFPCASNPCLNNGECVNTNDNLQYFCRCAPAFTGDNCEI 2745
>ref|XP_007459372.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Lipotes vexillifer]
Length = 4406
Score = 64.7 bits (156), Expect = 3e-08
Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = -1
Query: 542 NPCSSQPCLNNGQCVQTDFSSYKCQCAPGFDGQNCELDARVCQTQQPC---GQSQDVKCQ 372
+PC QPC N C+ ++C C GF G CE + CQ ++PC G Q +C
Sbjct: 4121 SPCERQPCRNGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLREPCLHGGTCQGTRC- 4179
Query: 371 SFRFGAALDHICIL-------QGGAAYGLTASQAHPSPCNGVD--GQFPLAFSDKGFIMC 219
+C L Q G+A+G+ S H G D GQ+ F D GF+
Sbjct: 4180 ----------LCPLGFSGPRCQQGSAHGIAESDWHLEGSGGNDAPGQYGAYFYDGGFLAL 4229
Query: 218 GGENMFVESCP 186
G MF S P
Sbjct: 4230 PG-RMFSRSLP 4239