BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00040576
         (306 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   119   4e-25
ref|XP_006362625.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   117   2e-24
ref|XP_007037335.1| Tetratricopeptide repeat (TPR)-like superfam...   116   3e-24
gb|EYU24377.1| hypothetical protein MIMGU_mgv1a020160mg [Mimulus...   115   6e-24
ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
gb|EXB44682.1| hypothetical protein L484_015939 [Morus notabilis]     114   1e-23
ref|XP_007211285.1| hypothetical protein PRUPE_ppa002699mg [Prun...   114   1e-23
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|NP_177601.1| pentatricopeptide repeat-containing protein [Ar...   113   2e-23
dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana] gi|6...   113   2e-23
ref|XP_006390406.1| hypothetical protein EUTSA_v10018254mg [Eutr...   112   5e-23
ref|XP_006301886.1| hypothetical protein CARUB_v10022358mg [Caps...   111   9e-23
ref|XP_006289319.1| hypothetical protein CARUB_v10002804mg [Caps...   111   1e-22
ref|NP_196272.1| pentatricopeptide repeat-containing protein [Ar...   111   1e-22
ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat...   110   3e-22
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...   110   3e-22
ref|XP_007155315.1| hypothetical protein PHAVU_003G190600g [Phas...   109   3e-22
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             109   3e-22
emb|CBI39100.3| unnamed protein product [Vitis vinifera]              109   5e-22
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi...   109   5e-22

>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  119 bits (298), Expect = 4e-25
 Identities = 54/68 (79%), Positives = 62/68 (91%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFG++RL +G +IR+VKNLRVCRDCHTVMKLISKVYG EIV+RDR+RFH F+ G
Sbjct: 576 SEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTG 635

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 636 SCSCRDYW 643


>ref|XP_006362625.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g74630-like [Solanum tuberosum]
          Length = 526

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFGM+RL +G  IR+VKNLRVC+DCH+ MKLISKVYG EIV+RDR+RFH F+EG
Sbjct: 459 SEKLAVAFGMARLCKGSTIRIVKNLRVCKDCHSFMKLISKVYGLEIVVRDRSRFHSFKEG 518

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 519 SCSCRDYW 526


>ref|XP_007037335.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508774580|gb|EOY21836.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 643

 Score =  116 bits (291), Expect = 3e-24
 Identities = 51/68 (75%), Positives = 62/68 (91%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFG+SRL +G  IR+VKNLR+CRDCHTVMKLISKVYG ++V+RDR+RFH+F +G
Sbjct: 576 SEKLAVAFGISRLCKGRDIRIVKNLRICRDCHTVMKLISKVYGLKVVVRDRSRFHMFNDG 635

Query: 124 HCSCRDYW 101
            CSC+DYW
Sbjct: 636 SCSCKDYW 643


>gb|EYU24377.1| hypothetical protein MIMGU_mgv1a020160mg [Mimulus guttatus]
          Length = 580

 Score =  115 bits (288), Expect = 6e-24
 Identities = 51/68 (75%), Positives = 61/68 (89%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFGM RL++G ++RVVKNLRVC+DCH VMKLIS+VYG EI+LRDR+RFH F+ G
Sbjct: 513 SEKLAVAFGMGRLTKGKIVRVVKNLRVCKDCHNVMKLISEVYGLEILLRDRSRFHSFKNG 572

Query: 124 HCSCRDYW 101
            CSC+DYW
Sbjct: 573 SCSCKDYW 580


>ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Fragaria vesca subsp. vesca]
          Length = 643

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFG++RL +G +IR+VKNLRVCRDCHTVMKLISKVY  EIV+RDR+RFH F++G
Sbjct: 576 SEKLAVAFGLARLPEGRMIRIVKNLRVCRDCHTVMKLISKVYRSEIVVRDRSRFHSFKDG 635

Query: 124 HCSCRDYW 101
            CSC DYW
Sbjct: 636 SCSCNDYW 643


>gb|EXB44682.1| hypothetical protein L484_015939 [Morus notabilis]
          Length = 644

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFGM+RL +G  IR+VKNLR+CRDCH VMKLISKVYG EIV+RDR+RFH F  G
Sbjct: 577 SEKLAVAFGMARLQEGKDIRIVKNLRICRDCHIVMKLISKVYGVEIVVRDRSRFHSFVAG 636

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 637 SCSCRDYW 644


>ref|XP_007211285.1| hypothetical protein PRUPE_ppa002699mg [Prunus persica]
           gi|462407020|gb|EMJ12484.1| hypothetical protein
           PRUPE_ppa002699mg [Prunus persica]
          Length = 643

 Score =  114 bits (285), Expect = 1e-23
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFG++RL  G+ IR+VKNLRVCRDCHTVMKLISKVY  EIV+RDR+RFH F++G
Sbjct: 576 SEKLAVAFGLARLRVGMNIRIVKNLRVCRDCHTVMKLISKVYRLEIVVRDRSRFHSFKDG 635

Query: 124 HCSCRDYW 101
            CSC+DYW
Sbjct: 636 SCSCKDYW 643


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLAVAFGM++L +G  IRVVKNLR+CRDCHTVMKLISKVY  EIV+RDR+RFH F  G
Sbjct: 575 SEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHG 634

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 635 SCSCRDYW 642


>ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74630 gi|12324801|gb|AAG52363.1|AC011765_15
           hypothetical protein; 86841-88772 [Arabidopsis thaliana]
           gi|332197495|gb|AEE35616.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score =  113 bits (283), Expect = 2e-23
 Identities = 50/68 (73%), Positives = 60/68 (88%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AF ++RLS+G  IR+VKNLR+CRDCH VMKL SKVYG EI++RDRNRFH F++G
Sbjct: 576 SEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDG 635

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 636 SCSCRDYW 643


>dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
           gi|62318835|dbj|BAD93890.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 635

 Score =  113 bits (283), Expect = 2e-23
 Identities = 50/68 (73%), Positives = 60/68 (88%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AF ++RLS+G  IR+VKNLR+CRDCH VMKL SKVYG EI++RDRNRFH F++G
Sbjct: 568 SEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDG 627

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 628 SCSCRDYW 635


>ref|XP_006390406.1| hypothetical protein EUTSA_v10018254mg [Eutrema salsugineum]
           gi|557086840|gb|ESQ27692.1| hypothetical protein
           EUTSA_v10018254mg [Eutrema salsugineum]
          Length = 645

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/68 (72%), Positives = 60/68 (88%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AF ++RLS+G  IR+VKNLR+CRDCH VMKL S+VYG EI++RDRNRFH F++G
Sbjct: 578 SEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSRVYGVEILVRDRNRFHSFKDG 637

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 638 SCSCRDYW 645


>ref|XP_006301886.1| hypothetical protein CARUB_v10022358mg [Capsella rubella]
           gi|482570596|gb|EOA34784.1| hypothetical protein
           CARUB_v10022358mg [Capsella rubella]
          Length = 643

 Score =  111 bits (278), Expect = 9e-23
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AF ++RL +G  IR+VKNLR+CRDCH VMKL SKVYG EIV+RDRNRFH F++G
Sbjct: 576 SEKLALAFAVARLPKGENIRIVKNLRICRDCHAVMKLTSKVYGVEIVVRDRNRFHSFKDG 635

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 636 SCSCRDYW 643


>ref|XP_006289319.1| hypothetical protein CARUB_v10002804mg [Capsella rubella]
           gi|482558025|gb|EOA22217.1| hypothetical protein
           CARUB_v10002804mg [Capsella rubella]
          Length = 622

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+A+GM +   G  IR+VKNLRVC DCHTV KLIS+VYGRE ++RDRNRFH F+ G
Sbjct: 555 SEKLAIAYGMMKTKAGTTIRIVKNLRVCEDCHTVTKLISEVYGREFIVRDRNRFHHFRNG 614

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 615 SCSCRDYW 622


>ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g06540 gi|10178110|dbj|BAB11403.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332003649|gb|AED91032.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 622

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+A+GM +   G  IR+VKNLRVC DCHTV KLIS+VYGRE+++RDRNRFH F+ G
Sbjct: 555 SEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNG 614

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 615 VCSCRDYW 622


>ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580-like [Glycine max]
          Length = 1428

 Score =  110 bits (274), Expect = 3e-22
 Identities = 48/68 (70%), Positives = 60/68 (88%)
 Frame = -3

Query: 304  SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
            SEKLA AFG+++L +G ++R+VKNLRVC DCHTVMKLISKVY  EI++RDR+RFH F++G
Sbjct: 1361 SEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDG 1420

Query: 124  HCSCRDYW 101
             CSCRDYW
Sbjct: 1421 FCSCRDYW 1428


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score =  110 bits (274), Expect = 3e-22
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AFG+ +   G+ IR++KNLRVC DCHTVMKLISK+Y REIV+RDR RFH F++G
Sbjct: 555 SEKLAIAFGLIKTEPGVTIRIIKNLRVCEDCHTVMKLISKIYDREIVMRDRTRFHHFKDG 614

Query: 124 HCSCRDYW 101
            C+C DYW
Sbjct: 615 RCTCGDYW 622


>ref|XP_007155315.1| hypothetical protein PHAVU_003G190600g [Phaseolus vulgaris]
           gi|561028669|gb|ESW27309.1| hypothetical protein
           PHAVU_003G190600g [Phaseolus vulgaris]
          Length = 626

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/68 (69%), Positives = 60/68 (88%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA AFG+++L +G ++R+VKNLRVC DCHTVMKLISK+Y  EI++RDR+RFH F++G
Sbjct: 559 SEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKIYRVEIIVRDRSRFHSFKDG 618

Query: 124 HCSCRDYW 101
            CSCRDYW
Sbjct: 619 FCSCRDYW 626


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  109 bits (273), Expect = 3e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEK+A+AFG+ R      IR+VKNLRVCRDCHTV K++SKVYGR+IVLRDR RFH F  G
Sbjct: 783 SEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGG 842

Query: 124 HCSCRDYW 101
           HCSC+DYW
Sbjct: 843 HCSCQDYW 850


>emb|CBI39100.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  109 bits (272), Expect = 5e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AFGM R   G  IR+VKNLRVC DCHT  KLISKV+GRE+++RDRNRFH F++G
Sbjct: 416 SEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQG 475

Query: 124 HCSCRDYW 101
            CSC DYW
Sbjct: 476 LCSCMDYW 483


>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  109 bits (272), Expect = 5e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 304 SEKLAVAFGMSRLSQGIVIRVVKNLRVCRDCHTVMKLISKVYGREIVLRDRNRFHLFQEG 125
           SEKLA+AFGM R   G  IR+VKNLRVC DCHT  KLISKV+GRE+++RDRNRFH F++G
Sbjct: 556 SEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQG 615

Query: 124 HCSCRDYW 101
            CSC DYW
Sbjct: 616 LCSCMDYW 623