BLASTX nr result
ID: Cocculus23_contig00040531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040531
(932 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 258 2e-66
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 254 4e-65
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 254 4e-65
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 251 4e-64
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 248 2e-63
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 248 3e-63
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 248 3e-63
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 247 5e-63
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 247 5e-63
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 246 7e-63
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 246 1e-62
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 244 4e-62
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 244 5e-62
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 241 2e-61
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 241 2e-61
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 239 1e-60
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 238 2e-60
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 238 3e-60
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 237 6e-60
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 237 6e-60
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 258 bits (660), Expect = 2e-66
Identities = 126/310 (40%), Positives = 195/310 (62%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FS+ ++ + GPDG+ FFI W ++G + ++ FF +G +LK+ N I LIPK +
Sbjct: 457 FSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVN 516
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
+ ++RPIS N +YKVI++L DRL R++ ++ QSAF+ GR++ N+ LA +LV
Sbjct: 517 PTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLV 576
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
G N + +P ++ +D+KKA+D V W F+ +LR + P FI W+ QCISTP+F++ +
Sbjct: 577 HGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSI 636
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG + G+FK +GLRQGDPLSP +F L ME+ S L+H + + I P+ + SH++
Sbjct: 637 NGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLM 696
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+V+IF +F + I TLD F+ +SGL NK KS L L G++ E++ + G
Sbjct: 697 FADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESN-ANAAYGF 755
Query: 32 ERGYVPIQYL 3
G +PI+YL
Sbjct: 756 PIGTLPIRYL 765
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 254 bits (648), Expect = 4e-65
Identities = 128/309 (41%), Positives = 193/309 (62%)
Frame = -1
Query: 929 SMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKSA 750
S+ ++ GPDG++V FF W +IG + +A + FF++G +LK+ N + LIPK+ +A
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377
Query: 749 SSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELVR 570
+I E+RPIS N +YKVISKL RL ++ ++ +QSAF+ GR++ N+ LA E+V
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437
Query: 569 GINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILVN 390
G NR + +P ++ +D+KKA+D V W F+ +LR + P +I W+ QCI+TPSF+I VN
Sbjct: 438 GYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVN 497
Query: 389 GSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHIIF 210
G++ G+F+ +GLRQGDPLSP +F L ME S L++ + I P+ SH++F
Sbjct: 498 GATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMF 557
Query: 209 ADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGIE 30
AD+V+IF + + I TLD F+ +SGL NK KS L G+ SE + + G
Sbjct: 558 ADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSE-RITSAAYGFP 616
Query: 29 RGYVPIQYL 3
G PI+YL
Sbjct: 617 AGTFPIRYL 625
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 254 bits (648), Expect = 4e-65
Identities = 128/309 (41%), Positives = 193/309 (62%)
Frame = -1
Query: 929 SMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKSA 750
S+ ++ GPDG++V FF W +IG + +A + FF++G +LK+ N + LIPK+ +A
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377
Query: 749 SSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELVR 570
+I E+RPIS N +YKVISKL RL ++ ++ +QSAF+ GR++ N+ LA E+V
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437
Query: 569 GINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILVN 390
G NR + +P ++ +D+KKA+D V W F+ +LR + P +I W+ QCI+TPSF+I VN
Sbjct: 438 GYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVN 497
Query: 389 GSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHIIF 210
G++ G+F+ +GLRQGDPLSP +F L ME S L++ + I P+ SH++F
Sbjct: 498 GATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMF 557
Query: 209 ADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGIE 30
AD+V+IF + + I TLD F+ +SGL NK KS L G+ SE + + G
Sbjct: 558 ADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSE-RITSAAYGFP 616
Query: 29 RGYVPIQYL 3
G PI+YL
Sbjct: 617 AGTFPIRYL 625
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 251 bits (640), Expect = 4e-64
Identities = 128/310 (41%), Positives = 184/310 (59%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM KD + GPDG+ F+ + W++IG++ I +Q FF GF+ K +N ++LIPK K
Sbjct: 184 FSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKE 243
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A I +YRPIS CNV+YK ISK+ A+RL R++ K + NQSAF+K R + N+ LA ELV
Sbjct: 244 AREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELV 303
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ ++ S + + +DI KA+D + WSF+ L MNFP FI W+ C+ST SFSI V
Sbjct: 304 KDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQV 363
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG GYF+ RGLRQG LSP +F + M+ LS ++ + + PRC + +H+
Sbjct: 364 NGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLC 423
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+++I + I L+ F+ GL K+TL L GVSD L+
Sbjct: 424 FADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSF 483
Query: 32 ERGYVPIQYL 3
G +P++YL
Sbjct: 484 GVGKLPVRYL 493
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 248 bits (634), Expect = 2e-63
Identities = 126/310 (40%), Positives = 191/310 (61%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FS+ ++ A GPDG++ FF W ++G + VQ FF +G +LK+ N + LIPK +
Sbjct: 458 FSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITN 517
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
+S + ++RPIS N +YKVI+KL RL +++ +++ +QSAF+ GR + N+ LA E+V
Sbjct: 518 SSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIV 577
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
G N K+ + ++ +D++KA+D V W FI + R + P F+ W+ QCISTP FS++V
Sbjct: 578 HGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMV 637
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NGSS G+FK +GLRQGDPLSP +F L ME S+L+ + I+ P+ SH++
Sbjct: 638 NGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLM 697
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+V++F + + IS LD F+ +SGL NK K+ L L G + EA I G
Sbjct: 698 FADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISH-YGF 756
Query: 32 ERGYVPIQYL 3
+PI+YL
Sbjct: 757 PISTLPIRYL 766
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 248 bits (632), Expect = 3e-63
Identities = 130/310 (41%), Positives = 187/310 (60%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM KD + GPDG+ F+ + WD+IG +F VQ FF+ GF+ K IN I ++LIPK +
Sbjct: 110 FSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLA 169
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + +YRPIS CNV+YKVISK+ A+RL ++ + + NQSAF+K R + N+ LA ELV
Sbjct: 170 AKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELV 229
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ ++ S + I +DI KA+D V WSF+ +L MNF +FI W+ CI+T SFS+ V
Sbjct: 230 KDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQV 289
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG VGYF+ KRGLRQG LSP +F + M+ LS ++ + + P+C +H+
Sbjct: 290 NGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLS 349
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD++++ I I D F + SGL + KSTL + GVS I
Sbjct: 350 FADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLF 409
Query: 32 ERGYVPIQYL 3
+ G +P++YL
Sbjct: 410 DVGQLPVRYL 419
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 248 bits (632), Expect = 3e-63
Identities = 126/310 (40%), Positives = 190/310 (61%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FS+ ++ A GPDG++ FF W ++G + VQ FF +G +LK+ N + LIPK +
Sbjct: 458 FSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITN 517
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
+S + ++RPIS N +YKVI+KL RL +++ +++ +QSAF+ GR + N+ LA E+V
Sbjct: 518 SSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIV 577
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
G N K+ + ++ +D++KA+D V W FI + R + P F+ W+ QCISTP FS++V
Sbjct: 578 HGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMV 637
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NGSS G+FK +GLRQGDPLSP +F L ME S+L+ + I P+ SH++
Sbjct: 638 NGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLM 697
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+V++F + + IS LD F+ +SGL NK K+ L L G + EA I G
Sbjct: 698 FADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISH-YGF 756
Query: 32 ERGYVPIQYL 3
+PI+YL
Sbjct: 757 PISTLPIRYL 766
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 247 bits (630), Expect = 5e-63
Identities = 119/310 (38%), Positives = 186/310 (60%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM ++ A GPDG+ V FF+ W ++ FIA ++ FF TG +LK N I+LIPK
Sbjct: 4 FSMPRNKAPGPDGFPVEFFLEAWPIVKESFIAAIKEFFLTGHLLKGFNATAITLIPKVPG 63
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + +RP++ C +YKVI++L + RL+ +++ V NQ FIKGR + N+ LA ELV
Sbjct: 64 ADQLNLFRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLASELV 123
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ + +D+ KAYD V+W F+ L+ +N P FI W+ CISTPS+SI
Sbjct: 124 DNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAY 183
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG +G+F GK+G+RQGDP+S +F LVM+ L+ + + + + P+C++ + +H+
Sbjct: 184 NGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLS 243
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD++L+F + I LD F + SGL N K+ L+L G + ++ SLG+
Sbjct: 244 FADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFERNRIMAASLGV 303
Query: 32 ERGYVPIQYL 3
+G +P++YL
Sbjct: 304 SQGSLPVRYL 313
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 247 bits (630), Expect = 5e-63
Identities = 119/310 (38%), Positives = 186/310 (60%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM ++ A GPDG+ V FF+ W ++ FIA ++ FF TG +LK N I+LIPK
Sbjct: 4 FSMPRNKAPGPDGFPVEFFLEAWPIVKESFIAAIKEFFLTGHLLKGFNATAITLIPKVPG 63
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + +RP++ C +YKVI++L + RL+ +++ V NQ FIKGR + N+ LA ELV
Sbjct: 64 ADQLNLFRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLASELV 123
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ + +D+ KAYD V+W F+ L+ +N P FI W+ CISTPS+SI
Sbjct: 124 DNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAY 183
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG +G+F GK+G+RQGDP+S +F LVM+ L+ + + + + P+C++ + +H+
Sbjct: 184 NGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLS 243
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD++L+F + I LD F + SGL N K+ L+L G + ++ SLG+
Sbjct: 244 FADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFERNRIMAASLGV 303
Query: 32 ERGYVPIQYL 3
+G +P++YL
Sbjct: 304 SQGSLPVRYL 313
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 246 bits (629), Expect = 7e-63
Identities = 127/310 (40%), Positives = 192/310 (61%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FS+ ++ A GPDG++ FF + W +IG + + FF +G +LK+ N + LIPK +
Sbjct: 354 FSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITN 413
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
ASS+ ++RPIS N VYKVISKL DRL + + +QSAF+ GR N+ LA ELV
Sbjct: 414 ASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELV 473
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
G N+K+ PS+++ +D++KA+D V W FI +LR +N P F W+++C+ST SFS+++
Sbjct: 474 HGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVIL 533
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG S G+F +GLRQGDP+SP +F L ME S L+ + I P+ SH++
Sbjct: 534 NGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLM 593
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+V+IF + + I +L+ F+ +SGL N K+ L G+S SE+ + S G
Sbjct: 594 FADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSM-ASYGF 652
Query: 32 ERGYVPIQYL 3
+ G +P++YL
Sbjct: 653 KLGSLPVRYL 662
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 246 bits (627), Expect = 1e-62
Identities = 125/310 (40%), Positives = 185/310 (59%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM D + GPDG+ FF W+++G +FI +Q FF GF+ K +N ++LIPK
Sbjct: 16 FSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLE 75
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
+ + +YRPIS CNV+YKVISK+ A+RL ++ + + NQS+F+K R + N+ LA +LV
Sbjct: 76 SKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLV 135
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ ++ S + I +DI KA D V WSF+ +L M+FP FI W+ CI+TPSFS+ V
Sbjct: 136 KDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQV 195
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG G+F+ RGLRQG LSP +F + M+ LS L+ + V +I P C +H+
Sbjct: 196 NGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLS 255
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+++I I I D FS++SGL + KST+ G+S + + +
Sbjct: 256 FADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPF 315
Query: 32 ERGYVPIQYL 3
E G +PI+YL
Sbjct: 316 EVGELPIRYL 325
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 244 bits (623), Expect = 4e-62
Identities = 124/310 (40%), Positives = 182/310 (58%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
F+M + + GPDG+ FF + W + G DFIA +Q FF GF+ K +N ++LIPK
Sbjct: 760 FAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDE 819
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + +YRPIS CNV+YKVISK+ A+RL ++ + NQSAF+K R + N+ LA ELV
Sbjct: 820 AIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELV 879
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ +++S P + +DI KA+D V W F+ +L +NFP +F W+ CIST +FS+ V
Sbjct: 880 KDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQV 939
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG G+F RGLRQG LSP +F + M LS +I + I P+C +H+
Sbjct: 940 NGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLC 999
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD++++FV + I + + F+ SGL + KST+ L GVS S+ S
Sbjct: 1000 FADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPF 1059
Query: 32 ERGYVPIQYL 3
G +P++YL
Sbjct: 1060 ANGQLPVRYL 1069
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 244 bits (622), Expect = 5e-62
Identities = 124/310 (40%), Positives = 182/310 (58%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
F++ + + GPDG+ FF W ++G IA VQ FF +G +L + N ++++PK +
Sbjct: 456 FALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPN 515
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A I E+RPIS CN +YKVISKL A RL ++ + +QSAF+KGR + N+ LA ELV
Sbjct: 516 ADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELV 575
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+G + + + ++ +D++KA+D V W FI +L+ N P F+ W+ QCI++ SFSI V
Sbjct: 576 QGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINV 635
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
+GS GYFKG +GLRQGDPLSP +F + ME LS L+ K I P+ S +
Sbjct: 636 SGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLA 695
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+++IF A + I S L+ F SGL N KS + G+ D++ + G
Sbjct: 696 FADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKE-DTLAFGF 754
Query: 32 ERGYVPIQYL 3
G P +YL
Sbjct: 755 VNGTFPFRYL 764
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 241 bits (616), Expect = 2e-61
Identities = 121/305 (39%), Positives = 184/305 (60%)
Frame = -1
Query: 917 DAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKSASSIG 738
D A G DG+N FF W I + A +Q FF + + IN I ++L+PK + A+ +
Sbjct: 453 DKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVK 512
Query: 737 EYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELVRGINR 558
E+RPI+ C V+YK+ISK+ +R+ ++ ++V QS FI GR I +NI LA EL+RG R
Sbjct: 513 EFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTR 572
Query: 557 KSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILVNGSSV 378
K +P ++ +DI+KAYD V WSF+E L E FP F+ W+M+C+ST S+S+LVNG
Sbjct: 573 KHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPT 632
Query: 377 GYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHIIFADEV 198
F+ ++GLRQGDP+SP +F L ME LS + + P+C +H++FAD++
Sbjct: 633 QPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDL 692
Query: 197 LIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGIERGYV 18
L+F AD + H++ FS SGL+ + KS + GV D A + + + ++ G +
Sbjct: 693 LMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGEL 752
Query: 17 PIQYL 3
P +YL
Sbjct: 753 PFRYL 757
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 241 bits (616), Expect = 2e-61
Identities = 126/310 (40%), Positives = 181/310 (58%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM D + GPDG+ F+ W++IG +FI +Q FF GF+ K IN ++LIPK K
Sbjct: 351 FSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKE 410
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + +YRPIS CNV+YKVISK+ A+RL V+ K + NQSAF+K R + N+ LA E+V
Sbjct: 411 AKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIV 470
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ ++ S + + +DI KA+D V W F+ L MNFP F W+ CI+T SFS+ V
Sbjct: 471 KDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQV 530
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG G F R LRQG LSP +F + M+ LS ++ + V Q P+C + +H+
Sbjct: 531 NGELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLS 590
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+++I I I L F+++SGL + KST+ L GV S I +
Sbjct: 591 FADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSF 650
Query: 32 ERGYVPIQYL 3
+ G +P++YL
Sbjct: 651 DVGKLPVRYL 660
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 239 bits (609), Expect = 1e-60
Identities = 121/310 (39%), Positives = 182/310 (58%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
F+M + GPDG+ FF + W + G DFIA ++ FF GF+ K +N ++LIPK
Sbjct: 36 FAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDE 95
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A+ + +YRPIS CNV+YKVISK+ A+RL ++ + NQSAF++ R + N+ LA ELV
Sbjct: 96 ATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELV 155
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ ++ S +P + +DI KA+D V W F+ +L +NFP +F W+ CIST +FS+ V
Sbjct: 156 KDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQV 215
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG G+F KRGLRQG LSP +F + M LS +I I P+C +H+
Sbjct: 216 NGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLC 275
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD++++F+ + + + F+ SGL + KSTL L GVS+ + I +
Sbjct: 276 FADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPF 335
Query: 32 ERGYVPIQYL 3
G +P++YL
Sbjct: 336 ASGQLPVRYL 345
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 238 bits (608), Expect = 2e-60
Identities = 126/303 (41%), Positives = 182/303 (60%)
Frame = -1
Query: 911 AVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKSASSIGEY 732
A G DG+N FF W +I + + FFE GF+ K IN ++LIPK A +Y
Sbjct: 458 APGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDY 517
Query: 731 RPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELVRGINRKS 552
RPI+ C+ +YK+ISK+ RL V+ ++V Q+ FI R I +NI LA EL+RG NR+
Sbjct: 518 RPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRH 577
Query: 551 TNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILVNGSSVGY 372
+P +I +DI+KAYD V W F+E L+E+ FP FIRW+M C+ T S+SIL+NG
Sbjct: 578 VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIP 637
Query: 371 FKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHIIFADEVLI 192
F ++GLRQGDPLSP +F L ME LS + + + P+C +H++FAD++L+
Sbjct: 638 FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697
Query: 191 FVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGIERGYVPI 12
F ADA I+ I + + FS+ SGL + KS + GGV EA + + + + G +P
Sbjct: 698 FARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPF 757
Query: 11 QYL 3
+YL
Sbjct: 758 RYL 760
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 238 bits (606), Expect = 3e-60
Identities = 121/310 (39%), Positives = 181/310 (58%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
F M D + GPDG+ FF + W++IG++F VQ FF GF+ K IN ++LIPK
Sbjct: 463 FRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTE 522
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + +YRPIS CNV+YKVISK+ A+RL V+ K + NQSAF+K R + N+ LA ELV
Sbjct: 523 AREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELV 582
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ ++ + + I +DI KA+D V W F+ + FP FI W+ CI+T SFS+ V
Sbjct: 583 KDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQV 642
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG GYF+ RGLRQG LSP +F + M+ LS ++ + P+C + +H+
Sbjct: 643 NGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLS 702
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD++++ I I D F+++SGL + KST+ L G+S + + + +
Sbjct: 703 FADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPF 762
Query: 32 ERGYVPIQYL 3
G +P++YL
Sbjct: 763 SSGQLPVRYL 772
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 237 bits (604), Expect = 6e-60
Identities = 118/310 (38%), Positives = 186/310 (60%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM ++ A GPDG+ V FFI W ++ + +A ++ FF +G + + N I+LIPK
Sbjct: 500 FSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTG 559
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + ++RP++ C +YKVI+++ + RL +++ V NQ FIKGR + N+ LA ELV
Sbjct: 560 ADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELV 619
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ +DI KAYD V+W F+ L+ ++ PL FI W+ CIS+ S+SI
Sbjct: 620 DNFEADGETTRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAF 679
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG +G+F+GK+G+RQGDP+S +F LVM+ LS + + P C++ + +H+
Sbjct: 680 NGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLS 739
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+VL+F A IA I + LD F + SGL N+ K+ L+L G + + + ++LGI
Sbjct: 740 FADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGI 799
Query: 32 ERGYVPIQYL 3
G +P++YL
Sbjct: 800 THGSLPVRYL 809
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 237 bits (604), Expect = 6e-60
Identities = 118/310 (38%), Positives = 186/310 (60%)
Frame = -1
Query: 932 FSMKKDAAVGPDGWNVRFFISEWDMIGNDFIAVVQHFFETGFILKEINHIFISLIPKSKS 753
FSM ++ A GPDG+ V FFI W ++ + +A ++ FF +G + + N I+LIPK
Sbjct: 457 FSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTG 516
Query: 752 ASSIGEYRPISMCNVVYKVISKLTADRLSRVVEKLVYLNQSAFIKGRAIQNNICLAHELV 573
A + ++RP++ C +YKVI+++ + RL +++ V NQ FIKGR + N+ LA ELV
Sbjct: 517 ADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELV 576
Query: 572 RGINRKSTNPSALINLDIKKAYDLVSWSFIEWSLREMNFPLSFIRWVMQCISTPSFSILV 393
+ +DI KAYD V+W F+ L+ ++ PL FI W+ CIS+ S+SI
Sbjct: 577 DNFEADGETTRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAF 636
Query: 392 NGSSVGYFKGKRGLRQGDPLSPVIFTLVMESLSTLIHQKVQQNQIKILPRCISKLNSHII 213
NG +G+F+GK+G+RQGDP+S +F LVM+ LS + + P C++ + +H+
Sbjct: 637 NGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLS 696
Query: 212 FADEVLIFVGADAFLIAHISSTLDFFSRFSGLSFNKLKSTLILGGVSDSEASLIQESLGI 33
FAD+VL+F A IA I + LD F + SGL N+ K+ L+L G + + + ++LGI
Sbjct: 697 FADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGI 756
Query: 32 ERGYVPIQYL 3
G +P++YL
Sbjct: 757 THGSLPVRYL 766