BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00040423
         (283 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007051367.1| Pentatricopeptide repeat-containing protein,...   168   8e-40
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...   157   1e-36
ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containi...   157   2e-36
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                         157   2e-36
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...   157   2e-36
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutr...   155   7e-36
ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Caps...   155   7e-36
ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Popu...   153   3e-35
ref|XP_006386676.1| pentatricopeptide repeat-containing family p...   153   3e-35
gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis]     151   1e-34
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containi...   150   2e-34
ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containi...   150   2e-34
ref|XP_004491942.1| PREDICTED: pentatricopeptide repeat-containi...   149   4e-34
gb|ACU25723.1| pentatricopeptide repeat-containing protein [Priv...   149   5e-34
ref|XP_006827884.1| hypothetical protein AMTR_s00008p00117710 [A...   148   7e-34
gb|ACU25732.1| pentatricopeptide repeat-containing protein [Petr...   147   1e-33

>ref|XP_007051367.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508703628|gb|EOX95524.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 807

 Score =  168 bits (425), Expect = 8e-40
 Identities = 79/93 (84%), Positives = 85/93 (91%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KARK+ EACQ FEKMVQDG+RA+CWTYNILIDGLFRNGRA AAYTLFCDLKKKGQFVDG+
Sbjct: 362 KARKVMEACQFFEKMVQDGVRASCWTYNILIDGLFRNGRAEAAYTLFCDLKKKGQFVDGI 421

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LCRE  LEGA  LVEEMEARGF+VD
Sbjct: 422 TYSIVVLQLCREGQLEGALRLVEEMEARGFIVD 454


>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score =  157 bits (397), Expect = 1e-36
 Identities = 74/94 (78%), Positives = 83/94 (88%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDG 104
           LKARK+ EACQLFEKMVQ+G+RA+CWTYNILIDGLFRNGRA A +TLFCDLKKKGQFVD 
Sbjct: 368 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 427

Query: 103 VTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           +T+SIV+L LCRE  LE A +LVEEME RGF VD
Sbjct: 428 ITFSIVVLQLCREGKLEEAVKLVEEMETRGFTVD 461


>ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Citrus sinensis]
          Length = 790

 Score =  157 bits (396), Expect = 2e-36
 Identities = 73/93 (78%), Positives = 83/93 (89%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           K+RK+ EACQLFEKMVQDG+R +CWT+NILIDGLFRNGRA AAYTLFCDLKKKG+FVDG+
Sbjct: 353 KSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGI 412

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           T+SIV+L LCRE  +E A  LVEEME RGFVVD
Sbjct: 413 TFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/94 (79%), Positives = 83/94 (88%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDG 104
           LKARK+ EACQLFEKMVQ+G+RA+CWTYNILIDGLFRNGRA A +TLFCDLKKKGQFVD 
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429

Query: 103 VTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           +T+SIV L LCRE  LEGA +LVEEME RGF VD
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/94 (79%), Positives = 83/94 (88%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDG 104
           LKARK+ EACQLFEKMVQ+G+RA+CWTYNILIDGLFRNGRA A +TLFCDLKKKGQFVD 
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429

Query: 103 VTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           +T+SIV L LCRE  LEGA +LVEEME RGF VD
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  156 bits (395), Expect = 2e-36
 Identities = 73/93 (78%), Positives = 84/93 (90%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KARK+ EACQ+FEKMV+DG+RA+CWT+NI+I GLFRNGRA A YTLFCDLKKKG+FVDG+
Sbjct: 354 KARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGYTLFCDLKKKGKFVDGI 413

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LCRE  LE A +LVEEMEARGFVVD
Sbjct: 414 TYSIVVLQLCREGQLEEALQLVEEMEARGFVVD 446


>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Glycine max]
          Length = 768

 Score =  156 bits (394), Expect = 3e-36
 Identities = 73/93 (78%), Positives = 83/93 (89%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KA K+ EACQLFEKMVQ+G+R +CWTYNILI GLFRNGRA AAYT+FCDLKKKGQFVDG+
Sbjct: 332 KATKVMEACQLFEKMVQEGVRPSCWTYNILIHGLFRNGRAEAAYTMFCDLKKKGQFVDGI 391

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LC+E  LE A +LVEEME+RGFVVD
Sbjct: 392 TYSIVVLQLCKEGQLEEALQLVEEMESRGFVVD 424


>ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutrema salsugineum]
           gi|557097371|gb|ESQ37807.1| hypothetical protein
           EUTSA_v10028437mg [Eutrema salsugineum]
          Length = 801

 Score =  155 bits (391), Expect = 7e-36
 Identities = 74/94 (78%), Positives = 83/94 (88%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDG 104
           LKARK+ EACQLFEKMVQ+G+RA+CWT NILIDGLFRNGRA A +TLFCDLKKKGQFVD 
Sbjct: 367 LKARKVVEACQLFEKMVQEGVRASCWTNNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 426

Query: 103 VTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           +T+SIV+L LCRE  LEGA +LVEEME RGF VD
Sbjct: 427 ITFSIVVLQLCREGKLEGAVKLVEEMETRGFSVD 460


>ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Capsella rubella]
           gi|482558640|gb|EOA22832.1| hypothetical protein
           CARUB_v10003556mg [Capsella rubella]
          Length = 802

 Score =  155 bits (391), Expect = 7e-36
 Identities = 72/94 (76%), Positives = 83/94 (88%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDG 104
           LKARK+ EACQLFEKMVQ+G+RA+CWTYNILIDGLFR+GRA A +TLFCDLKKKGQFVD 
Sbjct: 368 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRSGRAEAGFTLFCDLKKKGQFVDA 427

Query: 103 VTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           +T+SIV+L LC+E  LE A +LVEEME RGF VD
Sbjct: 428 ITFSIVVLQLCKEGDLEAAVKLVEEMETRGFTVD 461


>ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like isoform X1 [Solanum tuberosum]
          Length = 816

 Score =  153 bits (386), Expect = 3e-35
 Identities = 75/96 (78%), Positives = 85/96 (88%), Gaps = 2/96 (2%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQD-GIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKK-GQFV 110
           LKARKL +AC LF+KM++D G+RA+CWTYNILIDGLF+NGRA+AAYTLFCDLKKK   FV
Sbjct: 373 LKARKLTDACNLFQKMIEDDGVRASCWTYNILIDGLFKNGRALAAYTLFCDLKKKSNNFV 432

Query: 109 DGVTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           DGVTYSIVILHLCRE  L+ A +LVEEMEARGF VD
Sbjct: 433 DGVTYSIVILHLCREDRLDEALKLVEEMEARGFTVD 468


>ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Populus trichocarpa]
           gi|550345304|gb|EEE81962.2| hypothetical protein
           POPTR_0002s18390g [Populus trichocarpa]
          Length = 776

 Score =  153 bits (386), Expect = 3e-35
 Identities = 74/93 (79%), Positives = 80/93 (86%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KARK+ EACQLFEKMVQDG+RA+CWTYNILIDGL +NGRA A Y LFC LKKKGQFVD V
Sbjct: 338 KARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAV 397

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LCR+ HLE A  LVEEME RGFVVD
Sbjct: 398 TYSIVVLLLCRKGHLEEALHLVEEMEERGFVVD 430


>ref|XP_006386676.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345301|gb|ERP64473.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 776

 Score =  153 bits (386), Expect = 3e-35
 Identities = 74/93 (79%), Positives = 80/93 (86%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KARK+ EACQLFEKMVQDG+RA+CWTYNILIDGL +NGRA A Y LFC LKKKGQFVD V
Sbjct: 338 KARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAV 397

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LCR+ HLE A  LVEEME RGFVVD
Sbjct: 398 TYSIVVLLLCRKGHLEEALHLVEEMEERGFVVD 430


>gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis]
          Length = 788

 Score =  151 bits (381), Expect = 1e-34
 Identities = 72/94 (76%), Positives = 81/94 (86%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDG 104
           LKARK++EAC+LFEKM QDG+RA+ WTYN LIDGLF+N RA A YT+FCDLKKKGQFVDG
Sbjct: 342 LKARKVSEACELFEKMTQDGVRASSWTYNTLIDGLFKNERAEAGYTMFCDLKKKGQFVDG 401

Query: 103 VTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           +TYSIV+L LCRE  LE A  LVEEME RGFVVD
Sbjct: 402 ITYSIVVLQLCREGLLEEALGLVEEMEGRGFVVD 435


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score =  151 bits (381), Expect = 1e-34
 Identities = 73/93 (78%), Positives = 81/93 (87%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KARK+ EACQLF+KMVQ+ +RA+ WTYNILIDGLFRNGRA A YTLFCDLKKKGQ VD V
Sbjct: 367 KARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAV 426

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSI+IL LC+E  LE A +LVEEMEARGFVVD
Sbjct: 427 TYSIIILQLCKERLLEEALQLVEEMEARGFVVD 459


>ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Fragaria vesca subsp. vesca]
          Length = 789

 Score =  150 bits (378), Expect = 2e-34
 Identities = 72/93 (77%), Positives = 79/93 (84%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KARK+NE CQ+FE+M+Q G+RA+ WTYNILIDGLFRN RA AAYTLFCDLKKKGQFVDGV
Sbjct: 346 KARKVNEGCQMFERMIQYGVRASTWTYNILIDGLFRNARAEAAYTLFCDLKKKGQFVDGV 405

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LCRE  LE A  L EEME RGF VD
Sbjct: 406 TYSIVVLQLCREGLLEEALGLAEEMEMRGFTVD 438


>ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Solanum lycopersicum]
          Length = 819

 Score =  150 bits (378), Expect = 2e-34
 Identities = 73/96 (76%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQD-GIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKK-GQFV 110
           LK RKL +AC LF+KM++D G+RA+CWTYNILIDGLF+NGRA+AAYTLFCDLKKK   FV
Sbjct: 376 LKVRKLTDACNLFQKMIEDDGVRASCWTYNILIDGLFKNGRALAAYTLFCDLKKKSNNFV 435

Query: 109 DGVTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           DGV+YSIVILHLCRE  L+ A +LVEEMEARGF VD
Sbjct: 436 DGVSYSIVILHLCREDRLDEALKLVEEMEARGFTVD 471


>ref|XP_004491942.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cicer arietinum]
          Length = 793

 Score =  149 bits (376), Expect = 4e-34
 Identities = 69/93 (74%), Positives = 80/93 (86%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KA K+NEACQ+FEKM Q+G++A+CWTYNILI GL +NGR+ A YTLFCDLKKKGQFVD +
Sbjct: 360 KAAKVNEACQMFEKMAQEGVKASCWTYNILIHGLIKNGRSEAGYTLFCDLKKKGQFVDEI 419

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIV+L LC+E  LE A ELVEEMEARGF VD
Sbjct: 420 TYSIVVLQLCKEGQLEEALELVEEMEARGFSVD 452


>gb|ACU25723.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 431

 Score =  149 bits (375), Expect = 5e-34
 Identities = 73/96 (76%), Positives = 83/96 (86%), Gaps = 2/96 (2%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQD-GIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQ-FV 110
           LK+RKL EAC LFEKMV D G+RA+CWTYNILIDGL++NGR  AAYT+F DLK+KG  FV
Sbjct: 34  LKSRKLMEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGREEAAYTMFLDLKRKGNNFV 93

Query: 109 DGVTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           DG+TYSIVILHLCR+H LE A +LVEEME RGFVVD
Sbjct: 94  DGITYSIVILHLCRDHQLEEALQLVEEMEGRGFVVD 129


>ref|XP_006827884.1| hypothetical protein AMTR_s00008p00117710 [Amborella trichopoda]
           gi|548832519|gb|ERM95300.1| hypothetical protein
           AMTR_s00008p00117710 [Amborella trichopoda]
          Length = 788

 Score =  148 bits (374), Expect = 7e-34
 Identities = 70/93 (75%), Positives = 79/93 (84%)
 Frame = -1

Query: 280 KARKLNEACQLFEKMVQDGIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKGQFVDGV 101
           KA K++EAC  FE MVQ+GIR TCW+YNILIDGLFRNGRA AAYTLFCDLKKKGQFVD +
Sbjct: 356 KAGKVSEACNFFENMVQEGIRPTCWSYNILIDGLFRNGRAEAAYTLFCDLKKKGQFVDSI 415

Query: 100 TYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           TYSIVI +LC++   E + ELVEEMEARG VVD
Sbjct: 416 TYSIVIWYLCKDDKTEASLELVEEMEARGLVVD 448


>gb|ACU25732.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 431

 Score =  147 bits (372), Expect = 1e-33
 Identities = 74/96 (77%), Positives = 83/96 (86%), Gaps = 2/96 (2%)
 Frame = -1

Query: 283 LKARKLNEACQLFEKMVQD-GIRATCWTYNILIDGLFRNGRAVAAYTLFCDLKKKG-QFV 110
           LKARKL EAC LFE+MV D G+RA+CWTYNILIDGL++NGRA AAYT+F DLK+KG  FV
Sbjct: 34  LKARKLMEACNLFERMVDDDGVRASCWTYNILIDGLYKNGRAEAAYTMFLDLKRKGNNFV 93

Query: 109 DGVTYSIVILHLCREHHLEGAFELVEEMEARGFVVD 2
           DG+TYSIVILHLCRE  LE A +LVEEMEARGFV D
Sbjct: 94  DGITYSIVILHLCREGQLEEALQLVEEMEARGFVXD 129